Accessing and exploring AusTraits

load_austraits()

Load AusTraits database into R console

load_json()

Load the austraits.json

download_austraits()

Function for loading .rds AusTraits files

get_version_latest()

Retrieve the latest version of AusTraits

get_versions()

Print out AusTraits versions

summarise_austraits()

Summarise counts for a particular variable of interest

lookup_trait()

Look up a particular trait term

print(<austraits>)

Generic for outputting a nice summary for austraits objects

create_metadata()

Helper function to create nice metadata table

Wrangling AusTraits

Functions to extract, pivot and join data

extract_dataset() extract_dataset1() extract_dataset2()

Extract all data for a particular dataset

extract_taxa()

Extract data for one specific taxa

extract_trait()

Extract data for specific traits

trait_pivot_longer()

Pivot wide format AusTrait data into a long format

trait_pivot_wider()

Pivot long format austrait data into a wide format

summarise_trait_means()

Compute mean trait values for studies that have multiple observations for a given trait

join_all() join_taxonomy() join_methods() join_locations() join_contexts()

Join study details into main traits dataset

join_sites()

Joining location info for AusTraits versions <= 3.0.2

bind_trait_values()

Bind trait values

separate_trait_values()

Separate bounded trait values

as_wide_table()

Create a single wide table from the AusTraits data object

Quick data visualisations

Plot site or variance distributions

plot_locations()

Produce location maps of trait values

plot_site_locations()

Produce location maps of trait values

plot_trait_distribution_beeswarm()

Beeswarm Trait distribution