The AusTraits Plant Dictionary (APD) Ontology
Release 2.1.0
- Latest version:
- https://w3id.org/APD/index.html
- This version:
- https://w3id.org/APD/release/2.1.0/index.html
- Previous version:
- https://w3id.org/APD/release/2.0.0/index.html
- Authors:
- Elizabeth Wenk, Daniel Falster, Rachael Gallagher, Hervé Sauquet, Rowan Brownlee, Carl Boettiger
- Contributors:
- Tony Auld, Russell Barrett, Timothy Brodribb, Brendan Choat, David Coleman, Félix de Tombeur, Lily Dun, David Ellsworth, Carl Gosper, Lydia Guja, Gregory J. Jordan, Tom Le Breton, Andy Leigh, Patricia Lu-Irving, Belinda Medlyn, Rachael Nolan, Mark Ooi, Karen D. Sommerville, Ruby Stephens, Peter Vesk, Matthew White, Ian J. Wright, Sophie Yang
- Human readable tables:
- Serializations:
-
- License:
-
- Vocabulary service:
-
- Source:
-
- Contributing:
-
- Cite as:
- Wenk EH, Sauquet H, Gallagher RV, Brownlee R, Boettiger C, Coleman D, Yang S, Auld T, Barrett RL, Brodribb T, Choat B, Dun L, Ellsworth D, Gosper C, Guja L, Jordan GJ, Breton T, Leigh A, Irving PMedlyn B, Nolan R, Ooi M, Sommerville KD, Vesk P, White M, Wright IJ & Falster DS (2024) The AusTraits Plant Dictionary. Scientific Data 11, 537. DOI: 10.1038/s41597-024-03368-z
Abstract
This document describes the schema available from the APD namespace. The APD offers detailed descriptions for more than 500 plant trait concepts. It includes trait focused on plant morphology, plant nutrient concentrations, plant physiology, plant life history, and plant fire response. The definitions will be useful to researchers from diverse disciplines, including plant functional ecology, plant taxonomy, and conservation biology. All trait concepts are supported by comprehensive metadata including trait descriptions, allowable trait values, allowable ranges, preferred units, keywords, references, and links to matches in a selection of trait databases. The traits describe here also fully support the AusTraits plant trait database, <doi.org/10.5281/zenodo.3568417>.
Table of Contents
- Introduction
- Trait groups: Hierarchical trait groupings, included to enhance trait findability.
- Trait concepts: Traits defined within the vocabulary.
- Values for categorical traits: Allowed categorical trait values to support the defined trait concepts.
- Glossary: Terms used as keywords that were not available in other published vocabularies.
- Acknowledgements
1. Introduction
The APD is a compilation of the traits concepts used by AusTraits, a database of Australian plant traits. APD includes definitions for nearly 500 traits pertaining to plant functional ecology and plant morphology. The metadata for each trait concept has been reviewed by multiple people. Metadata includes a trait definition, accepted units and ranges (for numeric traits), allowable values (for categorical traits), keywords and trait groupings to enhance trait findability, references, and links to identical/similar traits in other trait databases. APD will be published in a machine-readable format (rdf representation), allowing the traits to be readily re-used by other databases. This is a human-friendly output, with embedded links to the references, other trait databases and keywords/concepts borrowed from other ontologies.
The APD is a community resource and we welcome any suggestions for edits, including additional key references for each trait or other trait databases for which we should add links.
2. Trait groups
The APD Trait groups express broad trait groupings, with each trait concept mapped into one or more trait groups as narrower
concepts.
plant trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0000000 |
description | A measurable or observable characteristic of a cellular component [GO:0005575], biological process [GO:0008150] or molecular function [GO:0003674] that is part of, or has participant a plant anatomical entity [PO:0025131] and/or a plant structure development stage [PO:0009012]. This includes physiological, molecular and biochemical traits as well. |
has narrower |
biochemical trait plant morphology trait biological process trait, physiological process trait life history trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0000000 |
biochemical trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0000002 |
description | A plant trait [TO:0000387] which is a quality of a chemical entity [CHEBI:24431], a plant metabolite [CHEBI:76924], or a molecular function [GO:0003674], which occurs in a cellular component [GO:0005575], plant anatomical entity [PO:0025131] or during a plant structure development stage [PO:0009012]. |
has narrower |
mineral and ion content trait metabolite content trait stable isotope ratio determination |
has broader | plant trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0000002 |
mineral and ion content trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0000004 |
description | A biochemical trait [TO:0000277] that is the amount of a particular mineral or ion constituent occurring in a plant anatomical entity [PO:0025131]. |
has narrower |
leaf mineral and ion content trait stem mineral and ion content trait bark mineral and ion content trait root mineral and ion content trait reproductive shoot system mineral and ion content trait cell or tissue mineral and ion content trait |
has broader | biochemical trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0000004 |
leaf mineral and ion content trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0000006 |
description | A mineral and ion content trait which is measured on a leaf [PO:0025034]. |
has narrower |
live leaf mineral and ion content trait senesced leaf mineral and ion content trait |
has broader | mineral and ion content trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0000006 |
live leaf mineral and ion content trait
senesced leaf mineral and ion content trait
stem mineral and ion content trait
wood mineral and ion content trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0000408 |
description | A mineral and ion content trait which is measured on wood [NCIT:C93062]. |
has narrower |
Wood carbon (C) content per unit wood dry mass Wood calcium (Ca) content per unit wood dry mass Wood potassium (K) content per unit wood dry mass Wood magnesium (Mg) content per unit wood dry mass Wood nitrogen (N) content per unit wood dry mass Wood sodium (Na) content per unit wood dry mass Wood phosphorus (P) content per unit wood dry mass |
has broader | stem mineral and ion content trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0000408 |
senesced wood mineral and ion content trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0000508 |
description | A mineral and ion content trait which is measured on senescent [PATO:0001487] wood [NCIT:C93062]. |
has narrower |
Dead wood calcium (Ca) content per unit dead wood dry mass Dead wood potassium (K) content per unit dead wood dry mass Dead wood magnesium (Mg) content per unit dead wood dry mass Dead wood nitrogen (N) content per unit dead wood dry mass Dead wood sodium (Na) content per unit dead wood dry mass Dead wood phosphorus (P) content per unit dead wood dry mass |
has broader | stem mineral and ion content trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0000508 |
bark mineral and ion content trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0000608 |
description | A mineral and ion content trait which is measured on bark [PO:0004518]. |
has broader | mineral and ion content trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0000608 |
root mineral and ion content trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0000808 |
description | A mineral and ion content trait which is measured on a root [PO:0009005]. |
has narrower |
Root carbon (C) content per unit root dry mass Root nitrogen (N) content per unit root dry mass Root phosphorus (P) content per unit root dry mass |
has broader | mineral and ion content trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0000808 |
reproductive shoot system mineral and ion content trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0001006 |
description | A mineral and ion content trait which is measured on the reproductive shoot system [PO:0025082]. |
has narrower |
Flower nitrogen (N) content per unit flower dry mass Fruit calcium (Ca) content per unit fruit dry mass Fruit potassium (K) content per unit fruit dry mass Fruit magnesium (Mg) content per unit fruit dry mass Fruit nitrogen (N) content per unit fruit dry mass Fruit phosphorus (P) content per unit fruit dry mass Fruit sulphur (S) content per unit fruit dry mass Seed calcium (Ca) content per unit seed dry mass Seed potassium (K) content per unit seed dry mass Seed magnesium (Mg) content per unit seed dry mass Seed nitrogen (N) content per unit seed dry mass Seed phosphorus (P) content per unit seed dry mass Seed sulphur (S) content per unit seed dry mass |
has broader | mineral and ion content trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0001006 |
cell or tissue mineral and ion content trait
metabolite content trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0002004 |
description | The trait associated with an assay to determine the affected metabolites profile. |
has narrower |
carbohydrate content trait lipid content trait phenolic compound content trait pigment content trait protein content trait |
has broader | biochemical trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0002004 |
carbohydrate content trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0002005 |
description | A metabolite content trait [TO:0000281] which is the amount of carbohydrate [CHEBI:16646] in a plant structure [PO:0009011]. |
has narrower |
Leaf total non-structural carbohydrate content per unit leaf area Leaf total non-structural carbohydrate content per unit leaf dry mass Leaf cellulose content per unit leaf dry mass Leaf starch content per unit leaf area Leaf soluble starch content per unit leaf area Leaf soluble starch content per unit leaf dry mass Leaf soluble sugar content per unit leaf area Leaf soluble sugar content per unit leaf dry mass Stem soluble starch content per unit stem dry mass Stem soluble sugar content per unit stem dry mass Bark cellulose content per unit bark dry mass Root soluble starch content per unit root dry mass Root soluble sugar content per unit root dry mass |
has broader | metabolite content trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0002005 |
lipid content trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0002006 |
description | The total lipid [CHEBI:18059] content measured in a plant or a plant part. |
has narrower | Seed oil content per unit seed dry mass |
has broader | metabolite content trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0002006 |
phenolic compound content trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0002007 |
description | Amount of phenolics present in the plant part, whole plant or product. |
has narrower |
Leaf lignin content per unit leaf dry mass Total leaf phenolic content per unit leaf dry mass Leaf tannin content per unit leaf dry mass Bark lignin content per unit bark dry mass Bark tannin content per unit bark dry mass |
has broader | metabolite content trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0002007 |
pigment content trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0002008 |
description | A metabolite content trait [TO:0000281] which is the amount of pigment [NCIT:C747] in a plant structure [PO:0009011]. |
has narrower |
Leaf carotenoid content per unit leaf area Leaf carotenoid content per unit leaf dry mass Leaf total chlorophyll content (chlorophyll A + B) per unit leaf area Leaf total chlorophyll content (chlorophyll A + B) per unit leaf dry mass Leaf chlorophyll A content per unit leaf area Leaf chlorophyll A content per unit leaf dry mass Leaf chlorophyll B content per unit leaf area Leaf chlorophyll B content per unit leaf dry mass Ratio of leaf chlorophyll A content to leaf chlorophyll B content Leaf chlorophyll content in SPAD units |
has broader | metabolite content trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0002008 |
protein content trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0002009 |
description | The total protein content measured in a plant or a plant part. |
has narrower |
Leaf soluble protein content per unit leaf area Leaf insoluble protein content per unit leaf area Leaf rubisco content per unit leaf dry mass Seed protein content per unit seed dry mass |
has broader | metabolite content trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0002009 |
stable isotope ratio determination
plant morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0010001 |
description | A plant trait [TO:0000387] which is a morphological quality of a plant anatomical entity [PO:0025131] or a constituent cellular component [GO:0005575] contained therein. Includes traits of plant structures [PO:0009011] such as plant cell [PO:0009002], plant organ [PO:0009008], portion of plant tissue [PO:0009007], vascular system [PO:0000034], whole plant [PO:0000003] and seed [PO:0009010], as well as those of plant anatomical spaces [PO:0025117] and portions of plant substance [PO:0025161]. |
has narrower |
whole plant morphology trait plant structure morphology trait vascular tissue morphology trait plant structure strength trait |
has broader | plant trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0010001 |
whole plant morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0010004 |
description | A plant structure morphology trait [TO:0000839] which is a quality of a whole plant [PO:0000003]. |
has narrower |
plant embryo morphology trait Plant canopy width Plant canopy breadth Plant vegetative height Height of a climbing plant Plant reproductive height Plant growth form Life form |
has broader | plant morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0010004 |
plant embryo morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0010104 |
description | A whole plant morphology trait [TO:0000398] which is a quality of a plant embryo [PO:0009009]. |
has narrower |
Embryo colour Cotyledon function Cotyledon position at germination Cotyledon hairiness Hypocotyl hairiness Seedling first true leaf type Seedling first node leaf count Seedling germination location |
has broader | whole plant morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0010104 |
plant structure morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0011001 |
description | A plant morphology trait [TO:0000017] which is a quality of a plant structure [PO:0009011]. |
has narrower |
leaf morphology trait portion of plant tissue morphology trait plant cell morphology trait stem morphology trait bark morphology trait root system morphology trait reproductive shoot system morphology trait Plant spinescence Physical defence structures Plant sex type Clonal spread mechanism Storage organ Plant fire tolerance strategy |
has broader | plant morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0011001 |
leaf morphology trait
leaf size trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0011204 |
description | Refer to size [PATO:0000117]: A morphology quality inhering in a bearer by virtue of the bearers physical magnitude. |
has narrower |
Leaf area Leaflet area Leaf length Leaf width Leaf thickness Petiole length Petiole width Leaflet length Leaflet width Leaf mass per area Leaf lamina mass per area Leaf area ratio (LAR Leaf fresh mass per leaf area |
has broader | leaf morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0011204 |
leaf mass trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0011206 |
description | A leaf morphology trait [TO:0000505] which is the weight of a leaf [PO:0025034]. |
has narrower |
Leaf dry mass Leaflet dry mass Leaf fresh mass Leaf mass per area Leaf lamina mass per area Leaf tissue density Leaf mass fraction Leaf dry matter content (LDMC Leaf fresh mass per leaf area Leaf water content per unit leaf area (leaf succulence Leaf water content per unit leaf dry mass Leaf water content per unit leaf fresh mass Leaf water content per unit saturated leaf mass Leaf cell wall fraction Leaf dry mass to stem dry mass ratio Stem dry mass to vegetative shoot dry mass ratio (support fraction |
has broader | leaf morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0011206 |
leaf shape trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0011304 |
description | A leaf morphology trait [TO:0000748] which is the variation in shapes and forms of a leaf [PO:0025034]. Refer to shape [PATO:0000052]: A morphological quality inhering in a bearer by virtue of the bearers ratios of distances between its features [points, edges, surfaces and also holes etc]. |
has narrower |
Plant spinescence Leaf type Leaf shape Leaf base shape Leaf margin Leaf margin posture Leaf lobation Leaf compoundness Leaf divisions Leaf lamina posture (leaf 3-dimensionality Leaf lamina posture (leaf 3-dimensional shape |
has broader | leaf morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0011304 |
leaf position trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0011402 |
description | A leaf morphology trait [TO:0000748] which refers to the position [PATO:0000140] of leaves [PO:0025034] relative to the stem [PO:0009047]. |
has narrower |
Leaf phyllotaxis Leaf arrangement Leaf axil angle Leaf inclination angle Leaf pendulousness |
has broader | leaf morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0011402 |
portion of plant tissue morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0011502 |
description | A plant structure morphology trait [TO:0000839] which is a quality of a portion of plant tissue [PO:0009007]. |
has narrower |
Cuticle thickness on the lower leaf surface Cuticle thickness on the upper leaf surface Leaf epidermis thickness Lower leaf side epidermis thickness Upper leaf side epidermis thickness Lower leaf side hypodermis thickness Upper leaf side hypodermis thickness Lower palisade mesophyll thickness Upper palisade mesophyll thickness Number of layers of palisade cells Spongy mesophyll cell thickness |
has broader | plant structure morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0011502 |
plant cell morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0011503 |
description | A plant structure morphology trait [TO:0000839] which is a quality of a plant cell [PO:0009002]. |
has narrower |
Average leaf epidermal cell density Lower leaf side epidermal cell density Upper leaf side epidermal cell density Palisade cell length Palisade cell width Cell cross-sectional area |
has broader | plant structure morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0011503 |
leaf stomatal complex morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0011602 |
description | A vascular leaf morphology trait [TO:0000419] which is a quality of the stomatal complexes [PO:0002000] present on the leaf surface. |
has narrower |
Stomatal density on the lower leaf surface Stomatal density on the upper leaf surface Stomatal density averaged across both leaf surfaces Stomatal distribution Stomatal hairiness Guard cell length |
has broader | leaf morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0011602 |
leaf optical properties trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0011702 |
description | Leaf morphology trait [TO:0000748] associated with the leafs optical [NCIT:C16940] properties, including the absorption [SWEET:soprocw:Absorption], transmission [SWEET:soprocw:Transmission], and reflection [SWEET:soprocw:Reflection] of light [OMIT:0009112]. |
has narrower |
Leaf visible light transmission Leaf visible light absorption Leaf visible light reflection Leaf infra-red light reflection |
has broader | leaf morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0011702 |
stem morphology trait
stem mass trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0011902 |
description | A stem morphology trait [TO:0000361] which is the mass [PATO:0000125] of a stem [PO:0009047]. |
has narrower |
Leaf dry mass to stem dry mass ratio Stem dry mass to vegetative shoot dry mass ratio (support fraction Side branch dry mass to whole plant dry mass ratio Stem dry matter content (SDMC Stem water content per unit saturated stem mass Stem mass fraction Stem saturated water content per unit stem dry mass |
has broader | stem morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0011902 |
bark morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0012002 |
description | A plant structure morphology trait [TO:0000736] which is a quality of bark [PO:0004518]. |
has narrower |
bark mass trait Bark morphology, Eucalyptus Bark thickness Scaled bark thickness Bark density Bark dry mass per unit bark surface area Bark water content per unit bark dry mass Bark water content per unit saturated bark mass Bark modulus of elasticity Physical defence structures |
has broader | plant structure morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0012002 |
bark mass trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0012006 |
description | A bark morphology trait which is the mass of bark. |
has broader | bark morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0012006 |
root system morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0012102 |
description | A collective plant organ structure morphology trait [TO:0000842] which is a quality of a root system [PO:0025025]. |
has narrower |
root morphology trait root mass trait root branchiness trait |
has broader | plant structure morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0012102 |
root morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0012104 |
description | A plant axis morphology trait [TO:0000738] which is a quality of a root [PO:0025025]. |
has narrower |
Root diameter Root system morphology Fine root volume to coarse root volume ratio Root biomass depth distribution coefficient Root system type (presence of taproot Specific root length (SRL Specific tap root length (STRL Root surface area per unit root dry mass (specific root area Root wood density Root to shoot ratio Root dry matter content (RDMC Root mass fraction Root vascular anatomy Storage organ length Storage organ diameter Plant nitrogen fixation capacity Plant root structures |
has broader | root system morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0012104 |
root mass trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0012106 |
description | A root morphology trait [TO:0000043] which is the weight of a root [PO:0009005]. |
has broader | root system morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0012106 |
root branchiness trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0012108 |
description | A root system morphology trait [TO:0000985] which is the branchiness [PATO:0002009] of the root system [PO:0025025]. |
has broader | root system morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0012108 |
reproductive shoot system morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0012202 |
description | A shoot system morphology trait [TO:0000077] that is a quality of a reproductive shoot system [PO:0025082]. |
has narrower |
floral organ morphology trait fruit morphology trait seed morphology trait Seed accessory cost fraction Seed accessory cost mass Life form |
has broader | plant structure morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0012202 |
floral organ morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0012404 |
description | A plant organ morphology trait [TO:0000736] which is a quality of a floral organ [PO:0025395]. |
has narrower |
perianth morphology trait androecium morphology trait gynoecium morphology trait Bud length Bud width Buds per inflorescence Maximum flower number Floral structural sex Pollination syndrome Pollination system |
has broader | reproductive shoot system morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0012404 |
perianth morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0012406 |
description | A collective phyllome structure morphology trait [TO:0000845] which is a quality of a perianth [PO:0009058]. |
has narrower |
Inflorescence length Inflorescence diameter Flower colour Perianth colour Flower length Flower diameter Floral orientation Perianth differentiation Fusion of perianth Number of perianth parts in each whorl (Perianth merism Number of perianth parts Perianth phyllotaxis Symmetry of perianth Number of perianth whorls Petal length |
has broader | floral organ morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0012406 |
androecium morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0012408 |
description | A collective phyllome structure morphology trait [TO:0000845] that is a quality of the androecium [PO:0009061]. |
has narrower |
Number of androecium parts in each whorl (Androecium structural merism Androecium structural phyllotaxis Number of androecium structural whorls Anther attachment Connective extension (apical Anther dehiscence Anther orientation Number of fertile stamens Filament presence and shape Fusion of filaments Fusion of filaments to inner perianth series Pollen grain aperture shape Number of pollen grain apertures Pollen grain length |
has broader | floral organ morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0012408 |
gynoecium morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0012409 |
description | A collective phyllome structure morphology trait [TO:0000845] that is a quality of the gynoecium [PO:0009062]. |
has narrower |
Gynoecium phyllotaxis Placentation Fusion of ovaries Ovary position Number of ovules per functional carpel Number of structural carpels Style differentiation Fusion of styles |
has broader | floral organ morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0012409 |
fruit morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0012504 |
description | A multi-tissue plant structure morphology trait [TO:0000836] which is a quality of a fruit [PO:0009001]. |
has narrower |
Fruit dry mass Fruit length Fruit width Fruit breadth Fruit wall thickness Fruit type Fruit fleshiness Fruit dehiscence Fruit colour Fruit surface hairiness Diaspore fleshiness Dispersal appendage Dispersal unit Diaspore dispersal syndrome |
has broader | reproductive shoot system morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0012504 |
seed morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0012604 |
description | A multi-tissue plant structure morphology trait [TO:0000836] which is a quality of a seed [PO:0009010]. |
has narrower |
Seed dry mass Diaspore dry mass Seed embryo and endosperm dry mass Seed length Seed width Seed height Seed volume Seed count Seed shape Seed surface hairs Seed surface texture Seed surface reflectivity Diaspore fleshiness Dispersal appendage Dispersal unit Seed colour Diaspore dispersal syndrome |
has broader | reproductive shoot system morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0012604 |
vascular tissue morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0013001 |
description | A portion of plant tissue morphology trait [TO:0000843] which is a quality of a vascular tissue and its parts. |
has narrower |
leaf vein morphology trait xylem vessel morphology trait Wood axial parenchyma fraction Wood conduit fraction Wood fibre fraction Wood ray parenchyma fraction Wood tracheid fraction |
has broader | plant morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0013001 |
leaf vein morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0013006 |
description | A vascular leaf morphology trait [TO:0000419] which is a quality of a leaf lamina vein [PO:0020138]. |
has narrower |
Leaf secondary vein angle Major leaf vein density Length of all minor and major leaf lamina veins per unit area Leaf vein frequency |
has broader | vascular tissue morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0013006 |
xylem vessel morphology trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0013102 |
description | A vascular tissue morphology trait [TO:0000470] which is a quality of a xylem vessel [PO:0025417]. |
has narrower |
Stem xylem vessel density Leaf xylem vessel density Stem xylem vessel diameter Stem xylem vessel hydraulic mean diameter Leaf xylem vessel diameter Stem xylem vessel lumen fraction Stem xylem vessel multiple fraction Stem non-lumen fraction xylem vessel wall fraction Xylem vulnerability index Leaf xylem vessel wall thickness Stem xylem vessel wall thickness Leaf xylem vessel length Stem xylem vessel length |
has broader | vascular tissue morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0013102 |
plant structure strength trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0014001 |
description | A plant structure morphology trait [TO:0000736] pertaining to the strength [PATO:0001230] of a plant structure [PO:0009011] and often indicating the amount of work [PATO:0001026] required to break or deform the plant structure. |
has narrower |
Leaf work to punch Leaf specific work to punch Leaf work to shear Leaf specific work to shear (fracture toughness Leaf work to tear Leaf specific work to tear Bark modulus of elasticity Stem modulus of elasticity Xylem modulus of elasticity Modulus of rupture |
has broader | plant morphology trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0014001 |
biological process trait, physiological process trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0020001 |
description | Refers to process quality [PATO:0001236]: A quality which inheres in an process. A plant trait [TO:0000387] which is a process quality [PATO:0001236] of a biological process [GO:0008150] which occurs in a plant anatomical entity [PO:0025131], a cellular component [GO:0005575], or during a plant structure development stage [PO:0009012]. |
has narrower |
photosynthetic trait water transport trait, hydraulic trait nutrient recycling trait |
has broader | plant trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0020001 |
photosynthetic trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0020202 |
description | A plant physiological process trait [TO:0000283] associated with photosynthesis [GO:0015979]. |
has narrower |
gas exchange trait photosystem performance trait Plant photosynthetic pathway Plant photosynthetic organ |
has broader | biological process trait, physiological process trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0020202 |
gas exchange trait
photosynthetic rate trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0020206 |
description | The total amount of carbon fixed by the plant per unit time and is measured by determining the changes in CO2 concentration over a plant leaf in a glass enclosure. |
has narrower |
Bark photosynthesis Leaf photosynthesis rate per unit leaf area under ambient light and CO2 (A Leaf photosynthesis rate per unit leaf area under saturating light and CO2 (Amax Leaf photosynthesis rate per unit leaf area under saturating light and ambient CO2 (Asat Leaf photosynthesis rate per unit leaf dry mass under ambient light and CO2 (A Leaf photosynthesis rate per unit leaf dry mass under saturating light and CO2 (Amax Leaf photosynthesis rate per unit leaf dry mass under saturating light and ambient CO2 (Asat |
has broader | gas exchange trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0020206 |
respiration rate trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0020208 |
description | A plant gas exchange trait which is the net rate of carbon dioxide [CHEBI:16526] released from a whole plant [PO:0000003] or plant organ [PO:0009008] due to cellular respiration [GO:0045333] and photorespiration [GO:0009853]. |
has narrower |
Leaf respiration rate per unit leaf area, in the dark (Rdark Leaf respiration rate per unit leaf dry mass, in the dark (Rdark Leaf respiration rate per unit leaf area, in the light (Rday Stem respiration rate per unit stem area, in the dark |
has broader | gas exchange trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0020208 |
transpiration rate trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0020210 |
description | A plant gas exchange trait which is the rate of transpiration [ENVO:02500035]. |
has narrower |
Leaf transpiration per unit leaf area under ambient conditions (E Leaf transpiration per unit leaf area during Amax measurement (E Leaf transpiration per unit leaf area during Asat measurement (E Leaf transpiration rate per unit leaf area, in the dark Integrated plant transpiration Whole plant sapflow |
has broader | gas exchange trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0020210 |
carbon dioxide concentration trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0020212 |
description | A plant gas exchange trait which is the concentration [PATO:0000033] of carbon dioxide [CHEBI:16526]. |
has narrower |
Leaf internal CO2 concentration during Amax measurement (ci Internal CO2 concentration during Asat measurement (ci Internal CO2 concentration under ambient conditions (ci Ratio of internal to external CO2 concentrations (ci/ca CO2 concentration inside chloroplasts (cc Ambient CO2 concentration (ca |
has broader | gas exchange trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0020212 |
photosystem performance trait
water transport trait, hydraulic trait
nutrient recycling trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0022002 |
description | A plant physiological process trait [TO:0000283] associated with the resorption [NCIT:C93204] and recycling [NCIT:C126395] of macronutrients [CHEBI:33937] and micronutrients [CHEBI:27027] as plant structures [PO:0009011] senesce [PATO:0001487]. |
has narrower |
Leaf nitrogen resorption efficiency Leaf phosphorus resorption efficiency |
has broader | biological process trait, physiological process trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0022002 |
life history trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0030001 |
description | A plant trait [TO:0000387] pertaining to an individuals life history [ECOCORE:00000018]. |
has narrower |
whole plant phenotype trait plant phenological trait interspecific interactions trait genetic structure trait reproductive structure life history trait fire response trait chemical stress sensitivity trait environmental tolerance trait Ephemeral life history class Plant growth substrate Clonal spread mechanism Storage organ Plant vegetative response to disturbances other than fire |
has broader | plant trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0030001 |
whole plant phenotype trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0030006 |
description | A plant life history trait which is a whole plant phenotype [FLOPO:0000089]. |
has narrower |
Plant spinescence Plant growth form Life form Life history Lifespan Plant alternative energy and nutrient acquisition strategies Woodiness Detailed woodiness categories Plant climbing mechanisms Plant succulence Stem growth habit Competitive stratum Vegetative reproduction ability Bud bank location Time from fire to fruiting Time from fire until 50% of individuals are fruiting |
has broader | life history trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0030006 |
plant phenological trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0030008 |
description | A growth and development trait [TO:0000357] which is the timing of the occurrence of plant structure development stages [PO:0009012] and the relevant biological processes [GO:0008150]. |
has narrower |
Leaf phenology Leaf lifespan Foliage time Age of reproductive maturity Environmental flowering cues Flowering time, by month Fruiting time, by month Seedling recruitment time, by month Seedling establishment conditions Canopy light environment required for reproduction Canopy light environment required for seedling establishment Seed storage location Post-fire flowering Time from fire to first flowering Time from fire until 50% of individuals are flowering Time from fire to peak flowering Time from fire until flowering declines |
has broader | life history trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0030008 |
interspecific interactions trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0030009 |
description | A plant life history trait that captures an interspecific interaction between organisms [GO:0044419]. |
has narrower |
Dispersal appendage Plant nitrogen fixation capacity Plant root structures Plant parasitism status Pollination syndrome Pollination system Diaspore dispersal syndrome Diaspore dispersal agents |
has broader | life history trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0030009 |
genetic structure trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0030059 |
description | A plant life history trait that captures information about genetic structures. |
has narrower |
Plant genome size Chromosome ploidy |
has broader | life history trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0030059 |
reproductive structure life history trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0030504 |
description | A plant life history trait pertaining to a plants reproductive structures [UBERON:0005156]. |
has narrower |
Seed storage location Serotiny Seedbank longevity class Seedbank longevity Dormancy type Seed germination treatment Seed germination proportion Seed viability Seed germination time Time from fire to first flowering Time from fire until 50% of individuals are flowering Time from fire to peak flowering Time from fire until flowering declines Time from fire to fruiting Time from fire until 50% of individuals are fruiting |
has broader | life history trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0030504 |
fire response trait
chemical stress sensitivity trait
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_group_0030702 |
description | Response by the plant in terms of resistivity or senility to chemical stress. |
has narrower |
Plant soil salinity tolerance Plant salt tolerance strategy Plant calcium sensitivity |
has broader | life history trait |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_group_0030702 |
environmental tolerance trait
3. Trait concepts
The APD Trait concepts express the traits defined by the APD.
Leaf aluminium (Al) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000012 |
alternative label | leaf_Al_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of aluminium [CHEBI:28984] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of aluminium in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 0.01 |
maxAllowedValue | 12000 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | aluminium atom |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf aluminium content per leaf dry mass [TOP449] (https://top-thesaurus.org/index) exact match: Leaf aluminium (Al) content per leaf dry mass [TRY:249] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000012 |
Leaf boron (B) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000014 |
alternative label | leaf_B_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of boron [CHEBI:27560] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of boron in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 0.01 |
maxAllowedValue | 1000 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
boron atom micronutrient |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf boron content per leaf dry mass [TOP450] (https://top-thesaurus.org/index) exact match: Leaf boron (B) content per leaf dry mass [TRY:250] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000014 |
Leaf carbon (C) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000016 |
alternative label | leaf_C_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of carbon [CHEBI:27594] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of carbon in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 50 |
maxAllowedValue | 750 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | carbon atom |
scope note | none |
has exact match |
leaf carbon content Leaf carbon content |
has close match | |
has related match | |
examples |
exact match: Leaf carbon content per leaf dry mass [TOP452] (https://top-thesaurus.org/index) exact match: Leaf carbon (C) content per leaf dry mass [TRY:13] (https://www.try-db.org/de/de.php) exact match: leaf carbon content per leaf dry mass [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000016 |
Leaf calcium (Ca) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000018 |
alternative label | leaf_Ca_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of calcium [CHEBI:22984] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of calcium in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 1000 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
calcium atom micronutrient |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf calcium content per leaf dry mass [TOP451] (https://top-thesaurus.org/index) exact match: Leaf calcium (Ca) content per leaf dry mass [TRY:252] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000018 |
Leaf chlorine (Cl) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000020 |
alternative label | leaf_Cl_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of chlorine [CHEBI:23116] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of chlorine in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 10 |
maxAllowedValue | 10000 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | chlorine atom |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf chlorine content per leaf dry mass [TOP453] (https://top-thesaurus.org/index) exact match: Leaf chlorine (Cl) content per leaf dry mass [TRY:539] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000020 |
Leaf chromium (Cr) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000022 |
alternative label | leaf_Cr_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of chromium [CHEBI:28073] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of chromium in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
ppm parts per million |
minAllowedValue | 0.01 |
maxAllowedValue | 150 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | chromium atom |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf chromium (Cr) content per leaf dry mass [TRY:254] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000022 |
Leaf cobalt (Co) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000024 |
alternative label | leaf_Co_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of cobalt [CHEBI:27638] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of cobalt in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
ppm parts per million |
minAllowedValue | 0.01 |
maxAllowedValue | 150 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
cobalt atom micronutrient |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf cobalt content per leaf dry mass [TOP454] (https://top-thesaurus.org/index) exact match: Leaf cobalt (Co) content per leaf dry mass [TRY:253] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000024 |
Leaf copper (Cu) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000026 |
alternative label | leaf_Cu_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of copper [CHEBI:28694] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of copper in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 0.01 |
maxAllowedValue | 150 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
copper atom micronutrient |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf copper content per leaf dry mass [TOP455] (https://top-thesaurus.org/index) exact match: Leaf copper (Cu) content per leaf dry mass [TRY:255] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000026 |
Leaf iron (Fe) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000028 |
alternative label | leaf_Fe_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of iron [CHEBI:18248] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of iron in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 1 |
maxAllowedValue | 10000 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
iron atom micronutrient |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf iron content per leaf dry mass [TOP456] (https://top-thesaurus.org/index) exact match: Leaf iron (Fe) content per leaf dry mass [TRY:256] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000028 |
Leaf potassium (K) content per unit leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000029 |
alternative label | leaf_K_per_area |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of potassium [CHEBI:26216] in a leaf [PO:0025034] to leaf area [PATO:0001323]. The ratio of the mass of potassium in a leaf to leaf area. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
g/m2 gram per square metre |
minAllowedValue | 0.1 |
maxAllowedValue | 10 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword |
potassium atom macronutrient |
scope note | none |
has exact match | leaf potassium content |
has close match | |
has related match | |
examples |
exact match: Leaf potassium content per leaf area [TOP483] (https://top-thesaurus.org/index) exact match: Leaf potassium (K) content per leaf area [TRY:52] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000029 |
Leaf potassium (K) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000030 |
alternative label | leaf_K_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of potassium [CHEBI:26216] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of potassium in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
potassium atom macronutrient |
scope note | none |
has exact match | leaf potassium content |
has close match | |
has related match | |
examples |
exact match: Leaf potassium content per leaf dry mass [TOP464] (https://top-thesaurus.org/index) exact match: Leaf potassium (K) content per leaf dry mass [TRY:44] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000030 |
Leaf magnesium (Mg) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000032 |
alternative label | leaf_Mg_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of magnesium [CHEBI:25107] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of magnesium in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 10000 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
magnesium atom micronutrient |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf magnesium content per leaf dry mass [TOP457] (https://top-thesaurus.org/index) exact match: Leaf magnesium (Mg) content per leaf dry mass [TRY:257] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000032 |
Leaf manganese (Mn) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000034 |
alternative label | leaf_Mn_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of manganese [CHEBI:18291] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of manganese in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 1 |
maxAllowedValue | 20000 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
manganese atom micronutrient |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf manganese content per leaf dry mass [TOP458] (https://top-thesaurus.org/index) exact match: Leaf manganese (Mn) content per leaf dry mass [TRY:258] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000034 |
Leaf molybdenum (Mo) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000036 |
alternative label | leaf_Mo_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of molybdenum [CHEBI:28685] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of molybdenum in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 0 |
maxAllowedValue | 100 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
molybdenum atom micronutrient |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf molybdenum content per leaf dry mass [TOP459] (https://top-thesaurus.org/index) exact match: Leaf molybdenum (Mo) content per leaf dry mass [TRY:259] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000036 |
Leaf nitrogen (N) content per unit leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000037 |
alternative label | leaf_N_per_area |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in a leaf [PO:0025034] to leaf area [PATO:0001323]. The ratio of the mass of nitrogen in a leaf to leaf area. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
g/m2 gram per square metre |
minAllowedValue | 0.08 |
maxAllowedValue | 50 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword |
nitrogen atom macronutrient |
scope note | none |
has exact match |
Leaf nitrogen content leaf nitrogen content leaf nitrogen concentration |
has close match | |
has related match | |
examples |
exact match: Leaf nitrogen content per leaf area [TOP481] (https://top-thesaurus.org/index) exact match: Leaf nitrogen (N) content per leaf area [TRY:50] (https://www.try-db.org/de/de.php) exact match: leaf nitrogen content per leaf area [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000037 |
Leaf nitrogen (N) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000038 |
alternative label | leaf_N_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of nitrogen in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.4 |
maxAllowedValue | 100 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
nitrogen atom macronutrient |
scope note | none |
has exact match |
Leaf nitrogen content leaf nitrogen content leaf nitrogen concentration |
has close match | |
has related match | |
examples |
exact match: Leaf nitrogen content per leaf dry mass [TOP462] (https://top-thesaurus.org/index) exact match: Leaf nitrogen (N) content per leaf dry mass [TRY:14] (https://www.try-db.org/de/de.php) exact match: leaf nitrogen content per leaf dry mass [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Mass-based leaf nitrogen content [BROT:7] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000038 |
Leaf sodium (Na) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000040 |
alternative label | leaf_Na_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of sodium [CHEBI:26708] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of sodium in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 1 |
maxAllowedValue | 20000 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
sodium atom micronutrient |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf sodium content per leaf dry mass [TOP460] (https://top-thesaurus.org/index) exact match: Leaf sodium (Na) content per leaf dry mass [TRY:260] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000040 |
Leaf nickel (Ni) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000042 |
alternative label | leaf_Ni_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nickel [CHEBI:28112] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of nickel in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | nickel atom |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf nickel content per leaf dry mass [TOP461] (https://top-thesaurus.org/index) exact match: Leaf nickel (Ni) content per leaf dry mass [TRY:261] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000042 |
Leaf phosphorus (P) content per unit leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000043 |
alternative label | leaf_P_per_area |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in a leaf [PO:0025034] to leaf area [PATO:0001323]. The ratio of the mass of phosphorus in a leaf to leaf area. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
g/m2 gram per square metre |
minAllowedValue | 0.005 |
maxAllowedValue | 1.2 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword |
phosphorus atom macronutrient |
scope note | none |
has exact match | leaf phosphorus content |
has close match | |
has related match | |
examples |
exact match: Leaf phosphorus content per leaf area [TOP482] (https://top-thesaurus.org/index) exact match: Leaf phosphorus (P) content per leaf area [TRY:51] (https://www.try-db.org/de/de.php) exact match: leaf phosphorus content per leaf area [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000043 |
Leaf phosphorus (P) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000044 |
alternative label | leaf_P_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of phosphorus in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.03 |
maxAllowedValue | 12 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom macronutrient |
scope note | none |
has exact match | leaf phosphorus content |
has close match | |
has related match | |
examples |
exact match: Leaf phosphorus content per leaf dry mass [TOP463] (https://top-thesaurus.org/index) exact match: Leaf phosphorus (P) content per leaf dry mass [TRY:15] (https://www.try-db.org/de/de.php) exact match: leaf phosphorus content per leaf dry mass [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000044 |
Leaf sulphur (S) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000046 |
alternative label | leaf_S_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of sulphur [CHEBI:26833] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of sulphur in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 50 |
maxAllowedValue | 50000 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
sulfur atom micronutrient |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf sulfur content per leaf dry mass [TOP466] (https://top-thesaurus.org/index) exact match: Leaf sulfur (S) content per leaf dry mass [TRY:262] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000046 |
Leaf selenium (Se) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000048 |
alternative label | leaf_Se_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of selenium [CHEBI:27568] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of selenium in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
ppm parts per million |
minAllowedValue | 0.01 |
maxAllowedValue | 100 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | selenium atom |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf selenium (Se) content per leaf dry mass [TRY:263] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000048 |
Leaf silicon (Si) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000050 |
alternative label | leaf_Si_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of silicon [CHEBI:27573] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of silicon in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. Leaf silicon (Si) must not be confused with leaf silica (SiO2). In plants, Si is mostly found as hydrated amorphous silica (SiO2 , nH2O). |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 200 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | silicon atom |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf silicon content per leaf dry mass [TOP465] (https://top-thesaurus.org/index) exact match: Leaf silicon (Si) content per leaf dry mass [TRY:264] (https://www.try-db.org/de/de.php) |
references |
Cooke & Leishman 2011 de Tombeur 2023 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 13/02/2023 |
reviewed by | Félix de Tombeur |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000050 |
Leaf zinc (Zn) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000052 |
alternative label | leaf_Zn_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of zinc [CHEBI:27363] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of zinc in a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 0.1 |
maxAllowedValue | 1000 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
zinc atom micronutrient |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf zinc content per leaf dry mass [TOP467] (https://top-thesaurus.org/index) exact match: Leaf zinc (Zn) content per leaf dry mass [TRY:268] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000052 |
Leaf carbon to nitrogen ratio (C/N)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000090 |
alternative label | leaf_CN_ratio |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of carbon [CHEBI:27594] in a leaf [PO:0025034] to the mass of nitrogen [CHEBI:25555] in the leaf. The ratio of the mass of carbon in a leaf to the mass of nitrogen in the leaf. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 10 |
maxAllowedValue | 1000 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass dimensionless ratio ratio; proportion |
keyword |
carbon atom macronutrient nitrogen atom |
scope note | none |
has exact match |
Ratio leaf nitrogen to leaf carbon C/N |
has close match | |
has related match | |
examples |
exact match: Leaf carbon/nitrogen (C/N) ratio [TRY:146] (https://www.try-db.org/de/de.php) exact match: leaf carbon content per leaf nitrogen content [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000090 |
Leaf nitrogen to phosphorus ratio (N/P) per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000091 |
alternative label | leaf_NP_ratio |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in a leaf [PO:0025034] to the mass of phosphorus [CHEBI:28659] in the leaf. The ratio of the mass of nitrogen in a leaf to the mass of phosphorus in the leaf. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 1 |
maxAllowedValue | 100 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass dimensionless ratio ratio; proportion |
keyword |
nitrogen atom macronutrient phosphorus atom |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf nitrogen/phosphorus (N/P) ratio [TRY:56] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | N_to_P_ratio |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000091 |
Senesced leaf aluminium (Al) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000112 |
alternative label | leaf_senesced_Al_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of aluminium [CHEBI:28984] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of aluminium in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 10 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
aluminium atom senescent plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Litter aluminium content per litter dry mass [TOP583] (https://top-thesaurus.org/index) exact match: Litter aluminium (Al ) content per litter dry mass [TRY:987] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_Al_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000112 |
Senesced leaf boron (B) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000114 |
alternative label | leaf_senesced_B_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of boron [CHEBI:27560] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of boron in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.001 |
maxAllowedValue | 10 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
boron atom senescent micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Litter boron content per litter dry mass [TOP584] (https://top-thesaurus.org/index) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_B_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000114 |
Senesced leaf carbon (C) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000116 |
alternative label | leaf_senesced_C_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of carbon [CHEBI:27594] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of carbon in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 1 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
carbon atom senescent plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Litter carbon content per litter dry mass [TOP586] (https://top-thesaurus.org/index) exact match: Litter carbon (C) content per litter dry mass [TRY:72] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_C_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000116 |
Senesced leaf calcium (Ca) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000118 |
alternative label | leaf_senesced_Ca_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of calcium [CHEBI:22984] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of calcium in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 1000 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
calcium atom senescent micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Litter calcium content per litter dry mass [TOP585] (https://top-thesaurus.org/index) exact match: Litter (leaf) calcium (Ca) content per leaf litter dry mass [TRY:943] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_Ca_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000118 |
Senesced leaf copper (Cu) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000126 |
alternative label | leaf_senesced_Cu_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of copper [CHEBI:28694] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of copper in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 0.01 |
maxAllowedValue | 100 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
copper atom senescent micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Litter copper content per litter dry mass [TOP589] (https://top-thesaurus.org/index) exact match: Litter (leaf) copper (Cu) content per leaf litter dry mass [TRY:947] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_Cu_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000126 |
Senesced leaf iron (Fe) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000128 |
alternative label | leaf_senesced_Fe_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of iron [CHEBI:18248] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of iron in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 1 |
maxAllowedValue | 10000 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
iron atom senescent micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Litter iron content per litter dry mass [TOP590] (https://top-thesaurus.org/index) exact match: Litter (leaf) iron (Fe) content per leaf litter dry mass [TRY:950] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_Fe_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000128 |
Senesced leaf potassium (K) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000130 |
alternative label | leaf_senesced_K_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of potassium [CHEBI:26216] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of potassium in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
potassium atom senescent macronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Litter potassium content per litter dry mass [TOP598] (https://top-thesaurus.org/index) exact match: Litter (leaf) potassium (K) content per leaf litter dry mass [TRY:958] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_K_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000130 |
Senesced leaf magnesium (Mg) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000132 |
alternative label | leaf_senesced_Mg_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of magnesium [CHEBI:25107] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of magnesium in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 100 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
magnesium atom senescent micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Litter magnesium content per litter dry mass [TOP591] (https://top-thesaurus.org/index) exact match: Litter (leaf) magnesium (Mg) content per leaf litter dry mass [TRY:952] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_Mg_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000132 |
Senesced leaf manganese (Mn) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000134 |
alternative label | leaf_senesced_Mn_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of manganese [CHEBI:18291] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of manganese in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 1 |
maxAllowedValue | 10000 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
manganese atom senescent micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Litter manganese content per litter dry mass [TOP592] (https://top-thesaurus.org/index) exact match: Litter (leaf) manganese (Mn) content per leaf litter dry mass [TRY:953] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_Mn_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000134 |
Senesced leaf molybdenum (Mo) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000136 |
alternative label | leaf_senesced_Mo_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of molybdenum [CHEBI:28685] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of molybdenum in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 0 |
maxAllowedValue | 30 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
molybdenum atom senescent micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Litter molybdenum content per litter dry mass [TOP593] (https://top-thesaurus.org/index) exact match: Litter molybdenium (Mo) content per litter dry mass [TRY:999] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_Mo_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000136 |
Senesced leaf nitrogen (N) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000138 |
alternative label | leaf_senesced_N_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of nitrogen in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 1 |
maxAllowedValue | 100 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
nitrogen atom senescent macronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Litter nitrogen content per litter dry mass [TOP596] (https://top-thesaurus.org/index) exact match: Litter (leaf) nitrogen (N) content per leaf litter dry mass [TRY:954] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_N_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000138 |
Senesced leaf sodium (Na) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000140 |
alternative label | leaf_senesced_Na_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of sodium [CHEBI:26708] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of sodium in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 10 |
maxAllowedValue | 20000 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
sodium atom senescent micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Litter sodium content per litter dry mass [TOP594] (https://top-thesaurus.org/index) exact match: Litter sodium (Na) content per litter dry mass [TRY:1004] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_Na_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000140 |
Senesced leaf nickel (Ni) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000142 |
alternative label | leaf_senesced_Ni_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nickel [CHEBI:28112] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of nickel in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 10 |
maxAllowedValue | 1e+05 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
nickel atom senescent plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_Ni_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000142 |
Senesced leaf phosphorus (P) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000144 |
alternative label | leaf_senesced_P_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of phosphorus in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.005 |
maxAllowedValue | 15 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom senescent macronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Litter phosphorus content per litter dry mass [TOP597] (https://top-thesaurus.org/index) exact match: Litter (leaf) phosphorus (P) content per leaf litter dry mass [TRY:957] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_P_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000144 |
Senesced leaf sulphur (S) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000146 |
alternative label | leaf_senesced_S_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of sulphur [CHEBI:26833] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of sulphur in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 100 |
maxAllowedValue | 50000 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
sulfur atom senescent micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Litter sulfur content per litter dry mass [TOP600] (https://top-thesaurus.org/index) exact match: Litter (leaf) sulfur (S) content per leaf litter dry mass [TRY:961] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_S_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000146 |
Senesced leaf zinc (Zn) content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000152 |
alternative label | leaf_senesced_Zn_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of zinc [CHEBI:27363] in a senescent [PATO:0001487] leaf [PO:0025034] (leaf litter [ENVO:01000628]) to the senescent leaf dry mass [TO:0001014]. The ratio of the mass of zinc in a senescent leaf (leaf litter) to the senescent leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/kg milligram per kilogram |
minAllowedValue | 0 |
maxAllowedValue | 100 |
has broader | senesced leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
zinc atom senescent micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Litter zinc content per litter dry mass [TOP601] (https://top-thesaurus.org/index) exact match: Litter (leaf) zinc (Zn) content per leaf litter dry mass [TRY:962] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | senesced_leaf_Zn_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000152 |
Leaf nitrogen resorption efficiency
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0022012 |
alternative label | leaf_N_resorption |
description |
A leaf [PO:0025034] nutrient recycling trait which is one minus the ratio [PATO:0001470] of leaf nitrogen [CHEBI:25555] content in a senescent [PATO:0001487] leaf (leaf litter [ENVO:01000628]) to leaf nitrogen content in a live [PATO:0001421] leaf, indicating what proportion of nitrogen is resorbed [NCIT:C93204] from the senescent leaf before it is shed. A leaf nutrient recycling trait which is one minus the ratio of leaf nitrogen content in a senescent leaf (leaf litter) to leaf nitrogen content in a live leaf, indicating what proportion of nitrogen is resorbed from the senescent leaf before it is shed. |
comments | |
value type | continuous variable |
unit |
mg/mg milligram per milligram |
minAllowedValue | -1.1 |
maxAllowedValue | 1 |
has broader | nutrient recycling trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion dimensionless ratio |
keyword |
nitrogen atom senescent resorption plant litter macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | resorption_leaf_N |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0022012 |
Leaf phosphorus resorption efficiency
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0022013 |
alternative label | leaf_P_resorption |
description |
A leaf [PO:0025034] nutrient recycling trait which is one minus the ratio [PATO:0001470] of leaf phosphorus [CHEBI:28659] content in a senescent [PATO:0001487] leaf (leaf litter [ENVO:01000628]) to leaf phosphorus content in a live [PATO:0001421] leaf, indicating what proportion of phosphorus is resorbed [NCIT:C93204] from the senescent leaf before it is shed. A leaf nutrient recycling trait which is one minus the ratio of leaf phosphorus content in a senescent leaf (leaf litter) to leaf phosphorus content in a live leaf, indicating what proportion of phosphorus is resorbed from the senescent leaf before it is shed. |
comments | |
value type | continuous variable |
unit |
mg/mg milligram per milligram |
minAllowedValue | -1.1 |
maxAllowedValue | 1 |
has broader | nutrient recycling trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion dimensionless ratio |
keyword |
phosphorus atom senescent resorption plant litter macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | resorption_leaf_P |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0022013 |
Stem carbon (C) content per unit stem dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000216 |
alternative label | stem_C_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of carbon [CHEBI:27594] in a stem [PO:0009047] to stem dry mass. The ratio of the mass of carbon in a stem to stem dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 100 |
maxAllowedValue | 1000 |
has broader | stem mineral and ion content trait |
plant structure | stem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | carbon atom |
scope note | |
has exact match | stem carbon content |
has close match | |
has related match | |
examples |
exact match: Stem carbon content per stem dry mass [TOP491] (https://top-thesaurus.org/index) exact match: Stem carbon (C) content per stem dry mass [TRY:407] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000216 |
Stem nitrogen (N) content per unit stem dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000238 |
alternative label | stem_N_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in a stem [PO:0009047] to stem dry mass. The ratio of the mass of nitrogen in a stem to stem dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 1000 |
has broader | stem mineral and ion content trait |
plant structure | stem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
nitrogen atom macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Stem nitrogen content per stem dry mass [TOP501] (https://top-thesaurus.org/index) exact match: Stem nitrogen (N) content per stem dry mass [TRY:406] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000238 |
Wood carbon (C) content per unit wood dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000416 |
alternative label | wood_C_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of carbon [CHEBI:27594] in wood [PO:0005848] to wood dry mass. The ratio of the mass of carbon in wood to wood dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 50 |
maxAllowedValue | 750 |
has broader | wood mineral and ion content trait |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
carbon atom wood plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Wood carbon content per wood dry mass trait [TOP732] (https://top-thesaurus.org/index) close match: Stem carbon (C) content per stem dry mass [TRY:407] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000416 |
Wood calcium (Ca) content per unit wood dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000418 |
alternative label | wood_Ca_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of calcium [CHEBI:22984] in wood [PO:0005848] to wood dry mass. The ratio of the mass of calcium in wood to wood dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.001 |
maxAllowedValue | 10 |
has broader | wood mineral and ion content trait |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
calcium atom wood micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Wood calcium content per wood dry mass trait [TOP731] (https://top-thesaurus.org/index) close match: Stem calcium (Ca) content per stem dry mass [TRY:623] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000418 |
Wood potassium (K) content per unit wood dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000430 |
alternative label | wood_K_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of potassium [CHEBI:26216] in wood [PO:0005848] to wood dry mass. The ratio of the mass of potassium in wood to wood dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 100 |
has broader | wood mineral and ion content trait |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
potassium atom wood macronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Wood potassium content per wood dry mass trait [TOP744] (https://top-thesaurus.org/index) close match: Stem potassium (K) content per stem dry mass [TRY:628] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000430 |
Wood magnesium (Mg) content per unit wood dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000432 |
alternative label | wood_Mg_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of magnesium [CHEBI:25107] in wood [PO:0005848] to wood dry mass. The ratio of the mass of magnesium in wood to wood dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 10 |
has broader | wood mineral and ion content trait |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
magnesium atom wood micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Wood magnesium content per wood dry mass trait [TOP737] (https://top-thesaurus.org/index) close match: Stem magnesium (Mg) content per stem dry mass [TRY:624] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000432 |
Wood nitrogen (N) content per unit wood dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000438 |
alternative label | wood_N_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in wood [PO:0005848] to wood dry mass. The ratio of the mass of nitrogen in wood to wood dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | wood mineral and ion content trait |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
nitrogen atom wood macronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Wood nitrogen content per wood dry mass trait [TOP742] (https://top-thesaurus.org/index) exact match: Wood nitrogen (N) content per wood dry mass [TRY:1229] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000438 |
Wood sodium (Na) content per unit wood dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000440 |
alternative label | wood_Na_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of sodium [CHEBI:26708] in wood [PO:0005848] to wood dry mass. The ratio of the mass of sodium in wood to wood dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | wood mineral and ion content trait |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
sodium atom wood micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Wood sodium content per wood dry mass trait [TOP740] (https://top-thesaurus.org/index) close match: Stem sodium (Na) content per stem dry mass [TRY:627] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000440 |
Wood phosphorus (P) content per unit wood dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000444 |
alternative label | wood_P_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in wood [PO:0005848] to wood dry mass. The ratio of the mass of phosphorus in wood to wood dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.001 |
maxAllowedValue | 10 |
has broader | wood mineral and ion content trait |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom wood macronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Wood phosphorus content per wood dry mass trait [TOP743] (https://top-thesaurus.org/index) close match: Stem phosphorus (P) content per stem dry mass [TRY:616] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000444 |
Dead wood calcium (Ca) content per unit dead wood dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000518 |
alternative label | wood_dead_Ca_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of calcium [CHEBI:22984] in senescent [PATO:0001487] wood [PO:0005848] (litter [ENVO:01000628]) to the dry mass of the senesced wood. The ratio of the mass of calcium in senescent wood (litter) to the dry mass of the senesced wood. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | senesced wood mineral and ion content trait |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
calcium atom senescent wood micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Coarse woody debris calcium content per coarse woody debris dry mass trait [TOP750] (https://top-thesaurus.org/index) close match: Litter (other than leaf: twigs, bark, flowers…) calcium (Ca) content per litter dry mass [TRY:2892] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | dead_wood_Ca_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000518 |
Dead wood potassium (K) content per unit dead wood dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000530 |
alternative label | wood_dead_K_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of potassium [CHEBI:26216] in senescent [PATO:0001487] wood [PO:0005848] (litter [ENVO:01000628]) to the dry mass of the senesced wood. The ratio of the mass of potassium in senescent wood (litter) to the dry mass of the senesced wood. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 10 |
has broader | senesced wood mineral and ion content trait |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
potassium atom senescent wood macronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Coarse woody debris potassium content per coarse woody debris dry mass trait [TOP763] (https://top-thesaurus.org/index) close match: Litter (other than leaf: twigs, bark, flowers…) potassium (K) content per litter dry mass [TRY:2891] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | dead_wood_K_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000530 |
Dead wood magnesium (Mg) content per unit dead wood dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000532 |
alternative label | wood_dead_Mg_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of magnesium [CHEBI:25107] in senescent [PATO:0001487] wood [PO:0005848] (litter [ENVO:01000628]) to the dry mass of the senesced wood. The ratio of the mass of magnesium in senescent wood (litter) to the dry mass of the senesced wood. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 10 |
has broader | senesced wood mineral and ion content trait |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
magnesium atom senescent wood micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Coarse woody debris magnesium content per coarse woody debris dry mass trait [TOP756] (https://top-thesaurus.org/index) close match: Litter (other than leaf: twigs, bark, flowers…) magnesium (Mg) content per litter dry mass [TRY:2893] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | dead_wood_Mg_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000532 |
Dead wood nitrogen (N) content per unit dead wood dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000538 |
alternative label | wood_dead_N_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in senescent [PATO:0001487] wood [PO:0005848] (litter [ENVO:01000628]) to the dry mass of the senesced wood. The ratio of the mass of nitrogen in senescent wood (litter) to the dry mass of the senesced wood. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | senesced wood mineral and ion content trait |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
nitrogen atom senescent wood macronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Coarse woody debris nitrogen content per coarse woody debris dry mass trait [TOP761] (https://top-thesaurus.org/index) close match: Litter twig nitrogen (N) content per twig dry mass [TRY:1199] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | dead_wood_N_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000538 |
Dead wood sodium (Na) content per unit dead wood dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000540 |
alternative label | wood_dead_Na_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of sodium [CHEBI:26708] in senescent [PATO:0001487] wood [PO:0005848] (litter [ENVO:01000628]) to the dry mass of the senesced wood. The ratio of the mass of sodium in senescent wood (litter) to the dry mass of the senesced wood. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.001 |
maxAllowedValue | 1 |
has broader | senesced wood mineral and ion content trait |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
sodium atom senescent wood micronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Coarse woody debris sodium content per coarse woody debris dry mass trait [TOP759] (https://top-thesaurus.org/index) close match: Litter (other than leaf: twigs, bark, flowers…) sodium (Na) content per litter dry mass [TRY:2898] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | dead_wood_Na_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000540 |
Dead wood phosphorus (P) content per unit dead wood dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000544 |
alternative label | wood_dead_P_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in senescent [PATO:0001487] wood [PO:0005848] (litter [ENVO:01000628]) to the dry mass of the senesced wood. The ratio of the mass of phosphorus in senescent wood (litter) to the dry mass of the senesced wood. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.001 |
maxAllowedValue | 10 |
has broader | senesced wood mineral and ion content trait |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom senescent wood macronutrient plant litter |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Coarse woody debris phosphorus content per coarse woody debris dry mass trait [TOP762] (https://top-thesaurus.org/index) close match: Litter other than leaf phosphorus (P) content per litter dry mass [TRY:2890] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | dead_wood_P_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000544 |
Bark aluminium (Al) content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000612 |
alternative label | bark_Al_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of aluminium [CHEBI:28984] in bark [PO:0004518] to bark dry mass. The ratio of the mass of aluminium in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 10 |
has broader | stem mineral and ion content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | aluminium atom |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Bark aluminium content per bark dry mass [TOP373] (https://top-thesaurus.org/index) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000612 |
Bark boron (B) content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000614 |
alternative label | bark_B_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of boron [CHEBI:27560] in bark [PO:0004518] to bark dry mass. The ratio of the mass of boron in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.001 |
maxAllowedValue | 1 |
has broader | stem mineral and ion content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
boron atom micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Bark boron content per bark dry mass [TOP374] (https://top-thesaurus.org/index) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000614 |
Bark carbon (C) content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000616 |
alternative label | bark_C_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of carbon [CHEBI:27594] in bark [PO:0004518] to bark dry mass. The ratio of the mass of carbon in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 50 |
maxAllowedValue | 750 |
has broader | stem mineral and ion content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | carbon atom |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Bark carbon content per bark dry mass [TOP376] (https://top-thesaurus.org/index) exact match: Bark carbon (C) content per bark dry mass [TRY:617] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000616 |
Bark calcium (Ca) content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000618 |
alternative label | bark_Ca_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of calcium [CHEBI:22984] in bark [PO:0004518] to bark dry mass. The ratio of the mass of calcium in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | stem mineral and ion content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
calcium atom micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Bark calcium content per bark dry mass [TOP375] (https://top-thesaurus.org/index) exact match: Bark calcium (Ca) content per bark dry mass [TRY:2957] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000618 |
Bark copper (Cu) content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000626 |
alternative label | bark_Cu_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of copper [CHEBI:28694] in bark [PO:0004518] to bark dry mass. The ratio of the mass of copper in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 1e-04 |
maxAllowedValue | 1 |
has broader | stem mineral and ion content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
copper atom micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Bark copper content per bark dry mass [TOP379] (https://top-thesaurus.org/index) exact match: Bark copper (Cu) content per bark dry mass [TRY:2958] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000626 |
Bark iron (Fe) content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000628 |
alternative label | bark_Fe_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of iron [CHEBI:18248] in bark [PO:0004518] to bark dry mass. The ratio of the mass of iron in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.001 |
maxAllowedValue | 10 |
has broader | stem mineral and ion content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
iron atom micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Bark iron content per bark dry mass [TOP380] (https://top-thesaurus.org/index) exact match: Bark iron (Fe) content per bark dry mass [TRY:2959] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000628 |
Bark potassium (K) content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000630 |
alternative label | bark_K_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of potassium [CHEBI:26216] in bark [PO:0004518] to bark dry mass. The ratio of the mass of potassium in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 100 |
has broader | stem mineral and ion content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
potassium atom macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Bark potassium content per bark dry mass [TOP388] (https://top-thesaurus.org/index) exact match: Bark potassium (K) content per bark dry mass [TRY:2960] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000630 |
Bark magnesium (Mg) content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000632 |
alternative label | bark_Mg_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of magnesium [CHEBI:25107] in bark [PO:0004518] to bark dry mass. The ratio of the mass of magnesium in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 10 |
has broader | stem mineral and ion content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
magnesium atom micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Bark magnesium content per bark dry mass [TOP381] (https://top-thesaurus.org/index) exact match: Bark magnesium (Mg) content per bark dry mass [TRY:2961] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000632 |
Bark manganese (Mn) content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000634 |
alternative label | bark_Mn_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of manganese [CHEBI:18291] in bark [PO:0004518] to bark dry mass. The ratio of the mass of manganese in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.001 |
maxAllowedValue | 1 |
has broader | stem mineral and ion content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
manganese atom micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Bark manganese content per bark dry mass [TOP382] (https://top-thesaurus.org/index) exact match: Bark manganese (Mn) content per bark dry mass [TRY:2962] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000634 |
Bark nitrogen (N) content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000638 |
alternative label | bark_N_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in bark [PO:0004518] to bark dry mass. The ratio of the mass of nitrogen in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | stem mineral and ion content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
nitrogen atom macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Bark nitrogen content per bark dry mass [TOP386] (https://top-thesaurus.org/index) exact match: Bark nitrogen (N) content per bark dry mass [TRY:618] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000638 |
Bark sodium (Na) content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000640 |
alternative label | bark_Na_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of sodium [CHEBI:26708] in bark [PO:0004518] to bark dry mass. The ratio of the mass of sodium in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 100 |
has broader | stem mineral and ion content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
sodium atom micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Bark sodium content per bark dry mass [TOP384] (https://top-thesaurus.org/index) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000640 |
Bark phosphorus (P) content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000644 |
alternative label | bark_P_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in bark [PO:0004518] to bark dry mass. The ratio of the mass of phosphorus in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.001 |
maxAllowedValue | 10 |
has broader | stem mineral and ion content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Bark phosphorus content per bark dry mass [TOP387] (https://top-thesaurus.org/index) exact match: Bark phosphorus (P) content per bark dry mass [TRY:619] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000644 |
Bark sulphur (S) content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000646 |
alternative label | bark_S_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of sulphur [CHEBI:26833] in bark [PO:0004518] to bark dry mass. The ratio of the mass of sulphur in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | stem mineral and ion content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
sulfur atom micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Bark sulfur content per bark dry mass [TOP390] (https://top-thesaurus.org/index) exact match: Bark sulfur (S) content per bark dry mass [TRY:2963] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000646 |
Bark zinc (Zn) content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000652 |
alternative label | bark_Zn_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of zinc [CHEBI:27363] in bark [PO:0004518] to bark dry mass. The ratio of the mass of zinc in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.001 |
maxAllowedValue | 10 |
has broader | stem mineral and ion content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
zinc atom micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Bark zinc content per bark dry mass [TOP391] (https://top-thesaurus.org/index) exact match: Bark zinc (Zn) content per bark dry mass [TRY:2964] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000652 |
Root carbon (C) content per unit root dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000816 |
alternative label | root_C_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of carbon [CHEBI:27594] in roots [PO:0009005] to root dry mass. The ratio of the mass of carbon in roots to root dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 50 |
maxAllowedValue | 750 |
has broader | root mineral and ion content trait |
plant structure | root |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | carbon atom |
scope note | |
has exact match | root carbon content |
has close match | |
has related match | |
examples |
exact match: Root carbon content per root dry mass trait [TOP713] (https://top-thesaurus.org/index) exact match: Root carbon (C) content per root dry mass [TRY:84] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000816 |
Root nitrogen (N) content per unit root dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000838 |
alternative label | root_N_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in roots [PO:0009005] to root dry mass. The ratio of the mass of nitrogen in roots to root dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | root mineral and ion content trait |
plant structure | root |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
nitrogen atom macronutrient |
scope note | |
has exact match | root nitrogen content |
has close match | |
has related match | |
examples |
exact match: Root nitrogen content per root dry mass trait [TOP723] (https://top-thesaurus.org/index) exact match: Root nitrogen (N) content per root dry mass [TRY:80] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000838 |
Root phosphorus (P) content per unit root dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0000844 |
alternative label | root_P_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in roots [PO:0009005] to root dry mass. The ratio of the mass of phosphorus in roots to root dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 100 |
has broader | root mineral and ion content trait |
plant structure | root |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom macronutrient |
scope note | |
has exact match | root system phosphorus content |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0000844 |
Flower nitrogen (N) content per unit flower dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001038 |
alternative label | flower_N_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in flowers [PO:0009046] to flower dry mass. The ratio of the mass of nitrogen in flowers to flower dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.5 |
maxAllowedValue | 100 |
has broader | reproductive shoot system mineral and ion content trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
reproduction nitrogen atom macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001038 |
Fruit calcium (Ca) content per unit fruit dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001118 |
alternative label | fruit_Ca_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of calcium [CHEBI:22984] in fruit [PO:0009001] to fruit dry mass. The ratio of the mass of calcium in fruit to fruit dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.5 |
maxAllowedValue | 100 |
has broader | reproductive shoot system mineral and ion content trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
calcium atom micronutrient reproduction |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001118 |
Fruit potassium (K) content per unit fruit dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001130 |
alternative label | fruit_K_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of potassium [CHEBI:26216] in fruit [PO:0009001] to fruit dry mass. The ratio of the mass of potassium in fruit to fruit dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.5 |
maxAllowedValue | 100 |
has broader | reproductive shoot system mineral and ion content trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
potassium atom macronutrient reproduction |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001130 |
Fruit magnesium (Mg) content per unit fruit dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001132 |
alternative label | fruit_Mg_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of magnesium [CHEBI:25107] in fruit [PO:0009001] to fruit dry mass. The ratio of the mass of magnesium in fruit to fruit dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.05 |
maxAllowedValue | 10 |
has broader | reproductive shoot system mineral and ion content trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
magnesium atom micronutrient reproduction |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001132 |
Fruit nitrogen (N) content per unit fruit dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001138 |
alternative label | fruit_N_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in fruit [PO:0009001] to fruit dry mass. The ratio of the mass of nitrogen in fruit to fruit dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.5 |
maxAllowedValue | 100 |
has broader | reproductive shoot system mineral and ion content trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
nitrogen atom macronutrient reproduction |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001138 |
Fruit phosphorus (P) content per unit fruit dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001144 |
alternative label | fruit_P_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in fruit [PO:0009001] to fruit dry mass. The ratio of the mass of phosphorus in fruit to fruit dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 10 |
has broader | reproductive shoot system mineral and ion content trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom macronutrient reproduction |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001144 |
Fruit sulphur (S) content per unit fruit dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001146 |
alternative label | fruit_S_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of sulphur [CHEBI:26833] in fruit [PO:0009001] to fruit dry mass. The ratio of the mass of sulphur in fruit to fruit dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.05 |
maxAllowedValue | 10 |
has broader | reproductive shoot system mineral and ion content trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
sulfur atom micronutrient reproduction |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001146 |
Seed calcium (Ca) content per unit seed dry mass
Seed potassium (K) content per unit seed dry mass
Seed magnesium (Mg) content per unit seed dry mass
Seed nitrogen (N) content per unit seed dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001238 |
alternative label | seed_N_per_seed_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in seeds [PO:0009010] to seed dry mass. The ratio of the mass of nitrogen in seeds to seed dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 10 |
maxAllowedValue | 1000 |
has broader | reproductive shoot system mineral and ion content trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
nitrogen atom macronutrient reproduction |
scope note | |
has exact match | concentration of nitrogen in seeds |
has close match | |
has related match | |
examples |
exact match: Seed nitrogen content per seed dry mass [TOP577] (https://top-thesaurus.org/index) exact match: Seed nitrogen (N) content per dry mass (or diaspore) [TRY:2945] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | seed_N_concentration |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001238 |
Seed phosphorus (P) content per unit seed dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001244 |
alternative label | seed_P_per_seed_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in seeds [PO:0009010] to seed dry mass. The ratio of the mass of phosphorus in seeds to seed dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 1 |
maxAllowedValue | 100 |
has broader | reproductive shoot system mineral and ion content trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom macronutrient reproduction |
scope note | |
has exact match | seed phosphorus content |
has close match | |
has related match | |
examples |
exact match: Seed phosphorus content per seed dry mass [TOP578] (https://top-thesaurus.org/index) exact match: Seed phosphorus (P) content per dry mass (or diaspore) [TRY:3000] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | seed_P_concentration |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001244 |
Seed sulphur (S) content per unit seed dry mass
Leaf cell wall nitrogen (N) per unit cell wall dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001511 |
alternative label | leaf_cell_wall_N_per_cell_wall_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in the plant cell wall [GO:0009505] in a leaf [PO:0025034] to the cell wall dry mass in the leaf. The ratio of the mass of nitrogen in the plant cell wall in a leaf to the cell wall dry mass in the leaf. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mmol{N}/g micromole per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 10 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
nitrogen atom macronutrient cell plant-type cell wall |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf cell wall nitrogen (N) content per cell wall dry mass [TRY:3376] (https://www.try-db.org/de/de.php) close match: Leaf cell wall nitrogen (N) content per leaf area [TRY:3377] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | leaf_cell_wall_N |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001511 |
Leaf cell wall nitrogen (N) per unit leaf N content
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001512 |
alternative label | leaf_cell_wall_N_per_leaf_N |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in the plant cell wall [GO:0009505] in a leaf [PO:0025034] to the mass of nitrogen in the leaf. The ratio of the mass of nitrogen in the plant cell wall in a leaf to the mass of nitrogen in the leaf. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/mg milligram per milligram |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
nitrogen atom macronutrient cell plant-type cell wall |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | leaf_cell_wall_N_fraction |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001512 |
Leaf rubisco nitrogen (N) content per unit leaf N content
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001513 |
alternative label | leaf_rubisco_N_per_total_leaf_N |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in rubisco [MESH:D012273] in a leaf [PO:0025034] to the mass of nitrogen in a leaf. The ratio of the mass of nitrogen in rubisco in a leaf to the mass of nitrogen in a leaf. |
comments | This trait is most commonly measured on leaf tissue. If the Rubisco concentration of a different tissue is measured, this should be explicitly noted in the methods or as a method context. |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.05 |
maxAllowedValue | 0.5 |
has broader | cell or tissue mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
nitrogen atom macronutrient cell protein Ribulose-Bisphosphate Carboxylase chloroplast |
scope note | |
has exact match | |
has close match | |
has related match | rubisco to nitrogen content ratio |
examples | exact match: Leaf nitrogen (N) fraction in Rubisco [TRY:187] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_rubisco_N_per_total_N |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001513 |
Leaf thylakoid protein nitrogen (N) content per unit leaf N content
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001514 |
alternative label | leaf_thylakoid_N_per_total_leaf_N |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of nitrogen [CHEBI:25555] in thylakoid [GO:0009579] proteins [CHEBI:36080] in a leaf [PO:0025034] to the mass of nitrogen in a leaf. The ratio of the mass of nitrogen in thylakoid proteins in a leaf to the mass of nitrogen in a leaf. |
comments | This trait is most commonly measured on leaf tissue. If the Rubisco concentration of a different tissue is measured, this should be explicitly noted in the methods or as a method context. |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.05 |
maxAllowedValue | 0.3 |
has broader | cell or tissue mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
nitrogen atom macronutrient cell protein thylakoid chloroplast |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_thylakoid_N_per_total_N |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001514 |
Leaf epidermis calcium (Ca) content per unit leaf fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001611 |
alternative label | leaf_epidermis_Ca_per_fresh_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of calcium [CHEBI:22984] in epidermal cells [PO:0004013] to epidermal cell fresh mass [APD:glossary/40044]. The ratio of the mass of calcium in epidermal cells to epidermal cell fresh mass. |
comments | |
value type | continuous variable |
unit |
umol{Ca}/g micromole per gram |
minAllowedValue | 1 |
maxAllowedValue | 500 |
has broader | cell or tissue mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
calcium atom epidermal cell cell micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_epidermis_Ca_per_fresh_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001611 |
Leaf hypodermis calcium (Ca) content per unit leaf fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001612 |
alternative label | leaf_hypodermis_Ca_per_fresh_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of calcium [CHEBI:22984] in the hypodermis [PO:0005051] to hypodermis fresh mass [APD:glossary/40044]. The ratio of the mass of calcium in the hypodermis to hypodermis fresh mass. |
comments | |
value type | continuous variable |
unit |
umol{Ca}/g micromole per gram |
minAllowedValue | 1 |
maxAllowedValue | 500 |
has broader | cell or tissue mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
calcium atom hypodermis cell micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_hypodermis_Ca_per_fresh_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001612 |
Leaf internal parenchyma cell calcium (Ca) content per unit leaf fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001613 |
alternative label | leaf_internal_parenchyma_Ca_per_fresh_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of calcium [CHEBI:22984] in parenchyma cells [PO:0000074] to parenchyma cell fresh mass [APD:glossary/40044]. The ratio of the mass of calcium in parenchyma cells to parenchyma cell fresh mass. |
comments | |
value type | continuous variable |
unit |
umol{Ca}/g micromole per gram |
minAllowedValue | 1 |
maxAllowedValue | 500 |
has broader | cell or tissue mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
calcium atom parenchyma cell cell micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_internal_parenchyma_Ca_per_fresh_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001613 |
Leaf palisade mesophyll cell calcium (Ca) content per unit leaf fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001614 |
alternative label | leaf_palisade_mesophyll_Ca_per_fresh_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of calcium [CHEBI:22984] in palisade mesophyll cells [PO:0006206] to palisade mesophyll cell fresh mass [APD:glossary/40044]. The ratio of the mass of calcium in palisade mesophyll cells to palisade mesophyll cell fresh mass. |
comments | |
value type | continuous variable |
unit |
umol{Ca}/g micromole per gram |
minAllowedValue | 1 |
maxAllowedValue | 100 |
has broader | cell or tissue mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
calcium atom palisade mesophyll cell cell micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_palisade_mesophyll_Ca_per_fresh_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001614 |
Leaf sclerenchyma cell calcium (Ca) content per unit leaf fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001615 |
alternative label | leaf_sclerenchyma_Ca_per_fresh_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of calcium [CHEBI:22984] in sclerenchyma cells [PO:0000077] to sclerenchyma cell fresh mass [APD:glossary/40044]. The ratio of the mass of calcium in sclerenchyma cells to sclerenchyma cell fresh mass. |
comments | |
value type | continuous variable |
unit |
umol{Ca}/g micromole per gram |
minAllowedValue | 1 |
maxAllowedValue | 100 |
has broader | cell or tissue mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
calcium atom sclerenchyma cell cell micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_sclerenchyma_Ca_per_fresh_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001615 |
Leaf spongy mesophyll cell calcium (Ca) content per unit leaf fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001616 |
alternative label | leaf_spongy_mesophyll_Ca_per_fresh_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of calcium [CHEBI:22984] in spongy mesophyll cells [PO:0006205] to spongy mesophyll cell fresh mass [APD:glossary/40044]. The ratio of the mass of calcium in spongy mesophyll cells to spongy mesophyll cell fresh mass. |
comments | |
value type | continuous variable |
unit |
umol{Ca}/g micromole per gram |
minAllowedValue | 1 |
maxAllowedValue | 1000 |
has broader | cell or tissue mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
calcium atom spongy mesophyll cell cell micronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_spongy_mesophyll_Ca_per_fresh_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001616 |
Leaf epidermis phosphorus (P) content per unit leaf fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001661 |
alternative label | leaf_epidermis_P_per_fresh_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in epidermal cells [PO:0004013] to epidermal cell fresh mass [APD:glossary/40044]. The ratio of the mass of phosphorus in epidermal cells to epidermal cell fresh mass. |
comments | |
value type | continuous variable |
unit |
umol{P}/g micromole per gram |
minAllowedValue | 0 |
maxAllowedValue | 10 |
has broader | cell or tissue mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom epidermal cell cell macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_epidermis_P_per_fresh_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001661 |
Leaf hypodermis phosphorus (P) content per unit leaf fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001662 |
alternative label | leaf_hypodermis_P_per_fresh_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in the hypodermis [PO:0005051] to hypodermis fresh mass [APD:glossary/40044]. The ratio of the mass of phosphorus in the hypodermis to hypodermis fresh mass. |
comments | |
value type | continuous variable |
unit |
umol{P}/g micromole per gram |
minAllowedValue | 0 |
maxAllowedValue | 10 |
has broader | cell or tissue mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom hypodermis cell macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_hypodermis_P_per_fresh_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001662 |
Leaf internal parenchyma cell phosphorus (P) content per unit leaf fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001663 |
alternative label | leaf_internal_parenchyma_P_per_fresh_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in parenchyma cells [PO:0000074] to parenchyma cell fresh mass [APD:glossary/40044]. The ratio of the mass of phosphorus in parenchyma cells to parenchyma cell fresh mass. |
comments | |
value type | continuous variable |
unit |
umol{P}/g micromole per gram |
minAllowedValue | 0 |
maxAllowedValue | 10 |
has broader | cell or tissue mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom parenchyma cell cell macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_internal_parenchyma_P_per_fresh_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001663 |
Leaf palisade mesophyll cell phosphorus (P) content per unit leaf fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001664 |
alternative label | leaf_palisade_mesophyll_P_per_fresh_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in palisade mesophyll cells [PO:0006206] to palisade mesophyll cell fresh mass [APD:glossary/40044]. The ratio of the mass of phosphorus in palisade mesophyll cells to palisade mesophyll cell fresh mass. |
comments | |
value type | continuous variable |
unit |
umol{P}/g micromole per gram |
minAllowedValue | 0 |
maxAllowedValue | 30 |
has broader | cell or tissue mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom palisade mesophyll cell cell macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_palisade_mesophyll_P_per_fresh_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001664 |
Leaf sclerenchyma cell phosphorus (P) content per unit leaf fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001665 |
alternative label | leaf_sclerenchyma_P_per_fresh_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in sclerenchyma cells [PO:0000077] to sclerenchyma cell fresh mass [APD:glossary/40044]. The ratio of the mass of phosphorus in sclerenchyma cells to sclerenchyma cell fresh mass. |
comments | |
value type | continuous variable |
unit |
umol{P}/g micromole per gram |
minAllowedValue | 0 |
maxAllowedValue | 10 |
has broader | cell or tissue mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom sclerenchyma cell cell macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_sclerenchyma_P_per_fresh_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001665 |
Leaf spongy mesophyll cell phosphorus (P) content per unit leaf fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001666 |
alternative label | leaf_spongy_mesophyll_P_per_fresh_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in spongy mesophyll cells [PO:0006205] to spongy mesophyll cell fresh mass [APD:glossary/40044]. The ratio of the mass of phosphorus in spongy mesophyll cells to spongy mesophyll cell fresh mass. |
comments | |
value type | continuous variable |
unit |
umol{P}/g micromole per gram |
minAllowedValue | 0 |
maxAllowedValue | 30 |
has broader | cell or tissue mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom spongy mesophyll cell cell macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_spongy_mesophyll_P_per_fresh_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001666 |
Lipid fraction of leaf P content per dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001667 |
alternative label | leaf_lipid_P_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in a leaf [PO:0025034] allocated to lipids [CHEBI:18059] to leaf total dry mass [TO:0001014]. The ratio of the mass of phosphorus in the lipid fraction of a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.001 |
maxAllowedValue | 10 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom lipid macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 03/06/2025 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001667 |
Nucleic acid fraction of leaf P content per dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001668 |
alternative label | leaf_nucleic_acid_P_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of the fraction of total phosphorus [CHEBI:28659] in a leaf [PO:0025034] allocated to nucleic acids [CHEBI:33696] to leaf total dry mass [TO:0001014]. The ratio of the mass of phosphorus in the lipid fraction of a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.001 |
maxAllowedValue | 10 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom nucleic acid macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 03/06/2025 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001668 |
Residual P fraction of leaf P content per dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001669 |
alternative label | leaf_residual_P_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in a leaf [PO:0025034] allocated to residual P to leaf total dry mass [TO:0001014]. The ratio of the mass of phosphorus in the lipid fraction of a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0 |
maxAllowedValue | 1 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 03/06/2025 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001669 |
Inorganic P fraction of leaf P content per dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001670 |
alternative label | leaf_inorganic_P_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in a leaf [PO:0025034] that is inorganic [NCIT:C66829] P to leaf total dry mass [TO:0001014]. The ratio of the mass of phosphorus in the lipid fraction of a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 20 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom inorganic macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 03/06/2025 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001670 |
Metabolite fraction of leaf P content per dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0001671 |
alternative label | leaf_metabolite_P_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phosphorus [CHEBI:28659] in a leaf [PO:0025034] allocated to metabolites [NCIT:C61154] to leaf total dry mass [TO:0001014]. The ratio of the mass of phosphorus in the lipid fraction of a leaf to leaf dry mass. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 1e-04 |
maxAllowedValue | 10 |
has broader | live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phosphorus atom metabolite macronutrient |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 03/06/2025 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0001671 |
Leaf total non-structural carbohydrate content per unit leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002021 |
alternative label | leaf_total_non-structural_carbohydrates_per_area |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of non-structural carbohydrates [CHEBI:16646] (sugars [APD:glossary/40106]) in a leaf [PO:0025034] to leaf area [PATO:0001323], where non-structural carbohydrates are carbohydrates that do not comprise the cell wall [GO:0009505]. The ratio of the mass of non-structural carbohydrates (sugars) in a leaf to leaf area, where non-structural carbohydrates are carbohydrates that do not comprise the cell wall. |
comments | |
value type | continuous variable |
unit |
g/m2 gram per square metre |
minAllowedValue | 0.1 |
maxAllowedValue | 50 |
has broader | carbohydrate content trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword |
carbohydrate starch sugar non-structural carbohydrates |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002021 |
Leaf total non-structural carbohydrate content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002022 |
alternative label | leaf_total_non-structural_carbohydrates_per_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of non-structural carbohydrates [CHEBI:16646] (sugars [APD:glossary/40106]) in a leaf [PO:0025034] to leaf dry mass [TO:0001014], where non-structural carbohydrates are carbohydrates that do not comprise the cell wall [GO:0009505]. The ratio of the mass of non-structural carbohydrates (sugars) in a leaf to leaf dry mass, where non-structural carbohydrates are carbohydrates that do not comprise the cell wall. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 10 |
maxAllowedValue | 200 |
has broader | carbohydrate content trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword |
carbohydrate starch sugar non-structural carbohydrates |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002022 |
Leaf cellulose content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002024 |
alternative label | leaf_cellulose_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of cellulose [CHEBI:62967] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of cellulose in a leaf to leaf dry mass. |
comments | |
value type | continuous variable |
unit |
mg/mg milligram per milligram |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader | carbohydrate content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
amorphous cellulose carbohydrate |
scope note | |
has exact match | |
has close match | |
has related match | cellulose content |
examples |
exact match: Leaf cellulose content per leaf dry mass [TOP819] (https://top-thesaurus.org/index) exact match: Leaf cellulose content per leaf dry mass [TRY:92] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002024 |
Leaf starch content per unit leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002025 |
alternative label | leaf_starch_per_area |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of total starch [CHEBI:28017] in a leaf [PO:0025034] to leaf area [PATO:0001323]. The ratio of the mass of total starch in a leaf to leaf area. |
comments | |
value type | continuous variable |
unit |
g/m2 gram per square metre |
minAllowedValue | 0.1 |
maxAllowedValue | 50 |
has broader | carbohydrate content trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword |
starch carbohydrate |
scope note | |
has exact match | |
has close match | |
has related match | starch content |
examples | exact match: Leaf starch content per leaf dry mass [TRY:505] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | starch_per_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002025 |
Leaf soluble starch content per unit leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002027 |
alternative label | leaf_soluble_starch_per_area |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] soluble [PATO:0001537] starch [CHEBI:28017] in a leaf [PO:0025034] to leaf area [PATO:0001323]. The ratio of the mass of water soluble starch in a leaf to leaf area. |
comments | |
value type | continuous variable |
unit |
g/m2 gram per square metre |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | carbohydrate content trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword |
starch carbohydrate |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf starch content per leaf dry mass [TRY:505] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | soluble_starch_per_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002027 |
Leaf soluble starch content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002028 |
alternative label | leaf_soluble_starch_per_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] soluble [PATO:0001537] starch [CHEBI:28017] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of water soluble starch in a leaf to leaf dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 200 |
has broader | carbohydrate content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
starch carbohydrate |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf starch content per leaf dry mass [TRY:505] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002028 |
Leaf soluble sugar content per unit leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002031 |
alternative label | leaf_soluble_sugars_per_area |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of sugar [APD:glossary/40106] in a leaf [PO:0025034] to leaf area [PATO:0001323], where ‘sugar’ refers to an informal grouping of carbohydrates [CHEBI:16646] that are soluble in [PATO:0001537] water [CHEBI:15377], including both monosaccharides [CHEBI:35381] and disaccharides [CHEBI:36233]. The ratio of the mass of sugar in a leaf to leaf area, where ‘sugar’ refers to an informal grouping of carbohydrates that are soluble in water, including both monosaccharides and disaccharides. |
comments | |
value type | continuous variable |
unit |
g/m2 gram per square metre |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | carbohydrate content trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword |
carbohydrate monosaccharide disaccharide sugar |
scope note | |
has exact match | |
has close match | |
has related match | total soluble sugar content |
examples |
exact match: Leaf sugar content per leaf area [TOP920] (https://top-thesaurus.org/index) exact match: Leaf sugar content per leaf dry mass [TRY:506] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | soluble_sugars_per_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002031 |
Leaf soluble sugar content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002032 |
alternative label | leaf_soluble_sugars_per_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of sugar [APD:glossary/40106] in a leaf [PO:0025034] to leaf dry mass [TO:0001014], where ‘sugar’ refers to an informal grouping of carbohydrates [CHEBI:16646] that are soluble in [PATO:0001537] water [CHEBI:15377], including both monosaccharides [CHEBI:35381] and disaccharides [CHEBI:36233]. The ratio of the mass of sugar in a leaf to leaf dry mass, where ‘sugar’ refers to an informal grouping of carbohydrates that are soluble in water, including both monosaccharides and disaccharides. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 1 |
maxAllowedValue | 200 |
has broader | carbohydrate content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
carbohydrate monosaccharide disaccharide sugar |
scope note | |
has exact match | |
has close match | |
has related match | total soluble sugar content |
examples |
exact match: Leaf sugar content per leaf dry mass [TOP919] (https://top-thesaurus.org/index) exact match: Leaf sugar content per leaf dry mass [TRY:506] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002032 |
Leaf soluble protein content per unit leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002035 |
alternative label | leaf_soluble_protein_per_area |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] soluble [PATO:0001537] protein [CHEBI:36080] in a leaf [PO:0025034] to leaf area [PATO:0001323]. The ratio of the mass of water soluble protein in a leaf to leaf area. |
comments | |
value type | continuous variable |
unit |
g/m2 gram per square metre |
minAllowedValue | 0.1 |
maxAllowedValue | 20 |
has broader | protein content trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword | protein |
scope note | |
has exact match | Leaf soluble protein content |
has close match | |
has related match | soluble protein content |
examples | close match: Leaf protein content per leaf dry mass [TRY:503] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | soluble_protein_per_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002035 |
Leaf insoluble protein content per unit leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002037 |
alternative label | leaf_insoluble_protein_per_area |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] insoluble [PATO:0001538] protein [CHEBI:36080] in a leaf [PO:0025034] to leaf area [PATO:0001323]. The ratio of the mass of water insoluble protein in a leaf to leaf area. |
comments | |
value type | continuous variable |
unit |
g/m2 gram per square metre |
minAllowedValue | 0.1 |
maxAllowedValue | 20 |
has broader | protein content trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword | protein |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Leaf protein content per leaf dry mass [TRY:503] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | insoluble_protein_per_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002037 |
Leaf lignin content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002050 |
alternative label | leaf_lignin_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of lignin [CHEBI:6457] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of lignin in a leaf to leaf dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 10 |
maxAllowedValue | 1000 |
has broader | phenolic compound content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | lignin |
scope note | |
has exact match | |
has close match | |
has related match | lignin content |
examples |
exact match: Leaf lignin content per leaf dry mass [TOP844] (https://top-thesaurus.org/index) exact match: Leaf lignin content per leaf dry mass [TRY:87] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 13/02/2023 |
reviewed by | Félix de Tombeur |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002050 |
Total leaf phenolic content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002052 |
alternative label | leaf_phenol_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of phenol [CHEBI:33853] in a leaf [PO:0025034] to leaf dry mass [TO:0001014], where phenol content is measured as gallic acid [CHEBI:30778] equivalents. The ratio of the mass of phenol in a leaf to leaf dry mass, where phenol content is measured as gallic acid equivalents. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 1 |
maxAllowedValue | 1000 |
has broader | phenolic compound content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phenol gallic acid |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf phenols content per leaf dry mass [TRY:147] (https://www.try-db.org/de/de.php) |
references | Salminen & Karonen 2011 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 13/02/2023 |
reviewed by | Félix de Tombeur |
change note | leaf_phenol_content_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002052 |
Leaf tannin content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002054 |
alternative label | leaf_tannin_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of tannins [CHEBI:26848] (a class of polyphenols [CHEBI:26195]) in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of tannins (a class of polyphenols) in a leaf to leaf dry mass. |
comments | Tannins are a specific class of polyphenolic compounds found in plants. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 1000 |
has broader | phenolic compound content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
phenol tannin polyphenol |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf tannin content per leaf dry mass [TRY:148] (https://www.try-db.org/de/de.php) |
references | Salminen & Karonen 2011 |
date created | 14/07/2021 |
date modified | 06/06/2025 |
date reviewed | 13/02/2023 |
reviewed by | Félix de Tombeur |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002054 |
Leaf carotenoid content per unit leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002055 |
alternative label | leaf_carotenoid_per_area |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of carotenoids [CHEBI:23044] in a leaf [PO:0025034] to leaf area [PATO:0001323]. The ratio of the mass of carotenoids in a leaf to leaf area. |
comments | |
value type | continuous variable |
unit |
umol{carotenoid}/m2 micromole per square metre |
minAllowedValue | 10 |
maxAllowedValue | 1000 |
has broader | pigment content trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword | carotenoid |
scope note | |
has exact match | |
has close match | |
has related match | carotenoid content |
examples | exact match: Leaf carotenoid content per leaf area [TRY:491] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | carotenoid_per_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002055 |
Leaf carotenoid content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002056 |
alternative label | leaf_carotenoid_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of carotenoids [CHEBI:23044] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of carotenoids in a leaf to leaf dry mass. |
comments | |
value type | continuous variable |
unit |
mmol{carotenoid}/kg millimole per kilogram |
minAllowedValue | 0.1 |
maxAllowedValue | 10 |
has broader | pigment content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | carotenoid |
scope note | |
has exact match | |
has close match | |
has related match | carotenoid content |
examples | exact match: Leaf carotenoid content per leaf dry mass [TRY:809] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | carotenoid_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002056 |
Leaf total chlorophyll content (chlorophyll A + B) per unit leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002081 |
alternative label | leaf_chlorophyll_per_area |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of chlorophyll [CHEBI:28966] in a leaf [PO:0025034] to leaf area [PATO:0001323], where chlorophyll content is the sum of chlorophyll a [CHEBI:18230] and chlorophyll b [CHEBI:27888] content. The ratio of the mass of chlorophyll in a leaf to leaf area, where chlorophyll content is the sum of chlorophyll a and chlorophyll b content. |
comments | |
value type | continuous variable |
unit |
umol{chlorophyll}/m2 micromole per square metre |
minAllowedValue | 10 |
maxAllowedValue | 2000 |
has broader | pigment content trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword |
chlorophyll chlorophyll a chlorophyll b chloroplast |
scope note | |
has exact match | Leaf chlorophyll content |
has close match | leaf chlorophyll content |
has related match | chlorophyll content |
examples | exact match: Leaf chlorophyll content per leaf area [TRY:413] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | chlorophyll_per_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002081 |
Leaf total chlorophyll content (chlorophyll A + B) per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002082 |
alternative label | leaf_chlorophyll_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of chlorophyll [CHEBI:28966] in a leaf [PO:0025034] to leaf dry mass [TO:0001014], where chlorophyll content is the sum of chlorophyll a [CHEBI:18230] and chlorophyll b [CHEBI:27888] content. The ratio of the mass of chlorophyll in a leaf to leaf dry mass, where chlorophyll content is the sum of chlorophyll a and chlorophyll b content. |
comments | |
value type | continuous variable |
unit |
mmol{chlorophyll}/kg millimole per kilogram |
minAllowedValue | 0.1 |
maxAllowedValue | 15 |
has broader | pigment content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
chlorophyll chlorophyll a chlorophyll b chloroplast |
scope note | |
has exact match | Leaf chlorophyll content |
has close match | leaf chlorophyll content |
has related match | chlorophyll content |
examples | exact match: Leaf chlorophyll content per leaf dry mass [TRY:164] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | chlorophyll_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002082 |
Leaf chlorophyll A content per unit leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002083 |
alternative label | leaf_chlorophyll_A_per_area |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of chlorophyll a [CHEBI:18230] in a leaf [PO:0025034] to leaf area [PATO:0001323]. The ratio of the mass of chlorophyll a in a leaf to leaf area. |
comments | |
value type | continuous variable |
unit |
umol{chlorophyllA}/m2 micromole per square metre |
minAllowedValue | 50 |
maxAllowedValue | 2000 |
has broader | pigment content trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword |
chlorophyll a chlorophyll chloroplast |
scope note | |
has exact match | |
has close match |
Chlorophyll a chlorophyll a content |
has related match | |
examples | exact match: Leaf chlorophyll content per leaf area (Chl a) [TRY:3476] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | chlorophyll_A_per_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002083 |
Leaf chlorophyll A content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002084 |
alternative label | leaf_chlorophyll_A_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of chlorophyll a [CHEBI:18230] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of chlorophyll a in a leaf to leaf dry mass. |
comments | |
value type | continuous variable |
unit |
mmol{chlorophyllA}/kg millimole per kilogram |
minAllowedValue | 0.1 |
maxAllowedValue | 10 |
has broader | pigment content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
chlorophyll a chlorophyll chloroplast |
scope note | |
has exact match | Chlorophyll a |
has close match | chlorophyll a content |
has related match | |
examples | exact match: Leaf chlorophyll content per leaf dry mass (Chl a) [TRY:3474] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | chlorophyll_A_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002084 |
Leaf chlorophyll B content per unit leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002085 |
alternative label | leaf_chlorophyll_B_per_area |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of chlorophyll b [CHEBI:27888] in a leaf [PO:0025034] to leaf area [PATO:0001323]. The ratio of the mass of chlorophyll b in a leaf to leaf area. |
comments | |
value type | continuous variable |
unit |
umol{chlorophyllB}/m2 micromole per square metre |
minAllowedValue | 10 |
maxAllowedValue | 1000 |
has broader | pigment content trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword |
chlorophyll b chlorophyll chloroplast |
scope note | |
has exact match | |
has close match |
Chlorophyll b chlorophyll b content |
has related match | |
examples | exact match: Leaf chlorophyll content per leaf area (Chl b) [TRY:3477] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | chlorophyll_B_per_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002085 |
Leaf chlorophyll B content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002086 |
alternative label | leaf_chlorophyll_B_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of chlorophyll b [CHEBI:27888] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of chlorophyll b in a leaf to leaf dry mass. |
comments | |
value type | continuous variable |
unit |
mmol{chlorophyllB}/kg millimole per kilogram |
minAllowedValue | 0.01 |
maxAllowedValue | 10 |
has broader | pigment content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
chlorophyll b chlorophyll chloroplast |
scope note | |
has exact match | Chlorophyll b |
has close match | chlorophyll b content |
has related match | |
examples | exact match: Leaf chlorophyll content per leaf dry mass (Chl b) [TRY:3475] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | chlorophyll_B_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002086 |
Ratio of leaf chlorophyll A content to leaf chlorophyll B content
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002087 |
alternative label | leaf_chlorophyll_A_B_ratio |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of chlorophyll a [CHEBI:18230] in a leaf [PO:0025034] to the mass of chlorophyll b [CHEBI:27888] in the leaf. The ratio of the mass of chlorophyll a in a leaf to the mass of chlorophyll b in the leaf. |
comments | |
value type | continuous variable |
unit |
umol{chlorophyllA}/umol{chlorophyllB} micromole per micromole |
minAllowedValue | 0.1 |
maxAllowedValue | 6 |
has broader | pigment content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion dimensionless ratio |
keyword |
chlorophyll a chlorophyll b chlorophyll chloroplast |
scope note | |
has exact match |
Chlorophyll a to b ratio chlorophyll ratio |
has close match | |
has related match | |
examples | exact match: Leaf chlorophyll a/b ratio [TRY:416] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | chlorophyll_A_B_ratio |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002087 |
Leaf rubisco content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002090 |
alternative label | leaf_rubisco_per_leaf_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of rubisco [MESH:D012273] in a leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of rubisco in a leaf to leaf dry mass. |
comments | This trait is most commonly measured on leaf tissue. If the Rubisco concentration of a different tissue is measured, this should be explicitly noted in the methods or as a method context. |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 5 |
maxAllowedValue | 50 |
has broader | protein content trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
Ribulose-Bisphosphate Carboxylase chloroplast protein |
scope note | |
has exact match | Leaf rubisco content |
has close match | rubisco content |
has related match | |
examples | close match: Leaf Rubisco content per leaf area [TRY:504] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | cell_rubisco_concentration |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002090 |
Stem soluble starch content per unit stem dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002127 |
alternative label | stem_soluble_starch_per_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] soluble [PATO:0001537] starch [CHEBI:28017] in a stem [PO:0009047] to stem dry mass. The ratio of the mass of water soluble starch in a stem to stem dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | carbohydrate content trait |
plant structure | stem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
starch carbohydrate |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002127 |
Stem soluble sugar content per unit stem dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002131 |
alternative label | stem_soluble_sugars_per_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of sugar [APD:glossary/40106] in a stem [PO:0009047] to stem dry mass, where ‘sugar’ refers to an informal grouping of carbohydrates [CHEBI:16646] that are soluble in [PATO:0001537] water [CHEBI:15377], including both monosaccharides [CHEBI:35381] and disaccharides [CHEBI:36233]. The ratio of the mass of sugar in a stem to stem dry mass, where ‘sugar’ refers to an informal grouping of carbohydrates that are soluble in water, including both monosaccharides and disaccharides. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 1 |
maxAllowedValue | 200 |
has broader | carbohydrate content trait |
plant structure | stem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
carbohydrate monosaccharide disaccharide sugar |
scope note | |
has exact match | |
has close match | |
has related match | sugar content |
examples | exact match: Stem sugar content per stem dry mass [TOP914] (https://top-thesaurus.org/index) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002131 |
Bark cellulose content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002224 |
alternative label | bark_cellulose_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of cellulose [CHEBI:62967] in bark [PO:0004518] to bark dry mass. The ratio of the mass of cellulose in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/mg milligram per milligram |
minAllowedValue | 0.1 |
maxAllowedValue | 1 |
has broader | carbohydrate content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | amorphous cellulose |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Bark cellulose content per bark dry mass [TOP813] (https://top-thesaurus.org/index) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002224 |
Bark lignin content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002250 |
alternative label | bark_lignin_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of lignin [CHEBI:6457] in bark [PO:0004518] to bark dry mass. The ratio of the mass of lignin in bark to bark dry mass. |
comments | |
value type | continuous variable |
unit |
mg/mg milligram per milligram |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader | phenolic compound content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword | lignin |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Bark lignin content per bark dry mass [TOP838] (https://top-thesaurus.org/index) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002250 |
Bark tannin content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002255 |
alternative label | bark_tannin_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of tannins [CHEBI:26848] (polyphenols [CHEBI:26195]) in bark [PO:0004518] to bark dry mass. The ratio of the mass of tannins (polyphenols) in bark to bark dry mass. |
comments | Tannins are a specific class of polyphenolic compounds found in plants. |
value type | continuous variable |
unit |
mg/mg milligram per milligram |
minAllowedValue | 1e-05 |
maxAllowedValue | 1 |
has broader | phenolic compound content trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
tannin polyphenol |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Salminen & Karonen 2011 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002255 |
Root soluble starch content per unit root dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002327 |
alternative label | root_soluble_starch_per_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] soluble [PATO:0001537] starch [CHEBI:28017] in roots [PO:0009005] to root dry mass. The ratio of the mass of water soluble starch in roots to root dry mass. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | carbohydrate content trait |
plant structure | root |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
starch carbohydrate |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Root starch content per dry mass [TRY:3147] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002327 |
Root soluble sugar content per unit root dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002331 |
alternative label | root_soluble_sugars_per_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of sugar [APD:glossary/40106] in roots [PO:0009005] to root dry mass, where ‘sugar’ refers to an informal grouping of carbohydrates [CHEBI:16646] that are soluble in [PATO:0001537] water [CHEBI:15377], including both monosaccharides [CHEBI:35381] and disaccharides [CHEBI:36233]. The ratio of the mass of sugar in roots to root dry mass, where ‘sugar’ refers to an informal grouping of carbohydrates that are soluble in water, including both monosaccharides and disaccharides. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 1 |
maxAllowedValue | 200 |
has broader | carbohydrate content trait |
plant structure | root |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
carbohydrate monosaccharide disaccharide sugar |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Root sugar content per root dry mass trait [TOP921] (https://top-thesaurus.org/index) exact match: Root sugar content per root dry mass [TRY:662] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002331 |
Seed protein content per unit seed dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002534 |
alternative label | seed_protein_per_seed_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of protein [CHEBI:36080] in a seed [PO:0009010] to seed dry mass [TO:0000181]. The ratio of the mass of protein in a seed to seed dry mass. |
comments |
It is best practice for the denominator to be seed dry mass. If data are reported on a per seed fresh mass basis, this should be explicitly noted in the methods or as a method context.
|
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 1e-05 |
maxAllowedValue | 1 |
has broader | protein content trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
protein seed weight, seed mass |
scope note | |
has exact match | seed protein content |
has close match | |
has related match | |
examples | exact match: Seed protein content per seed mass [TRY:97] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | seed_protein_content |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002534 |
Seed oil content per unit seed dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002544 |
alternative label | seed_oil_per_seed_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of lipids [CHEBI:18059] in a seed [PO:0009010] to seed dry mass [TO:0000181]. The ratio of the mass of lipids in a seed to seed dry mass. |
comments |
It is best practice for the denominator to be seed dry mass. If data are reported on a per seed fresh mass basis, this should be explicitly noted in the methods or as a method context.
|
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 1e-04 |
maxAllowedValue | 1 |
has broader | lipid content trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
lipid seed weight, seed mass |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Seed lipid content per seed dry mass [TOP880] (https://top-thesaurus.org/index) exact match: Seed oil content per seed mass [TRY:96] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | seed_oil_content |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002544 |
Leaf ash content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002822 |
alternative label | leaf_ash_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of leaf [PO:0025034] ash [ENVO:02000090] remaining after a combustion process [ENVO:01000839] to the leaf dry mass before the combustion process. The ratio of the mass of leaf ash remaining after a combustion process to the leaf dry mass before the combustion process. |
comments | Includes measurements on leaf analogs, including cladodes and phylloclades. |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 1e-04 |
maxAllowedValue | 1 |
has broader |
live leaf mineral and ion content trait fire response trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
ash combustion process fire |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf ash content per leaf dry mass [TRY:333] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | leaf_ash_content_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002822 |
Bark ash content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0002824 |
alternative label | bark_ash_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of bark [PO:0004518] ash [ENVO:02000090] remaining after a combustion process [ENVO:01000839] to the bark dry mass before the combustion process. The ratio of the mass of bark ash remaining after a combustion process to the bark dry mass before the combustion process. |
comments | |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 1e-04 |
maxAllowedValue | 1 |
has broader |
stem mineral and ion content trait fire response trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
ash combustion process fire |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | bark_ash_content_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0002824 |
Bark stable carbon isotope composition (delta13C)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0003011 |
alternative label | bark_delta13C |
description |
Carbon stable isotope ratio [ECSO:00001142], d13C [ECSO:00000669], of bark [PO:0004518]. Carbon stable isotope ratio, d13C, of bark. |
comments | delta13C is calculated as the ratio of, 13C/12C in a sample to 13C/12C in a standard, minus 1. The result is expressed in parts per thousand, commonly referred to as per mille. A more negative value for delta13C indicates the sample has a lower ratio of 13C/12C relative to the standard. |
value type | continuous variable |
unit |
{delta}[ppth] parts per thousand |
minAllowedValue | -50 |
maxAllowedValue | 0 |
has broader | stable isotope ratio determination |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
carbon stable isotope ratio d13C carbon-13 atom isotope |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Bark carbon (C) isotope signature (delta 13C) [TRY:829] (https://www.try-db.org/de/de.php) related match: Integrated water-use efficiency [BROT:16] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0003011 |
Leaf stable carbon isotope composition (delta13C)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0003012 |
alternative label | leaf_delta13C |
description |
Carbon stable isotope ratio [ECSO:00001142], d13C [ECSO:00000669], of leaves [PO:0025034]. Carbon stable isotope ratio, d13C, of leaves. |
comments | delta13C is calculated as the ratio of, 13C/12C in a sample to 13C/12C in a standard, minus 1. The result is expressed in parts per thousand, commonly referred to as per mille. A more negative value for delta13C indicates the sample has a lower ratio of 13C/12C relative to the standard. |
value type | continuous variable |
unit |
{delta}[ppth] parts per thousand |
minAllowedValue | -50 |
maxAllowedValue | 0 |
has broader | stable isotope ratio determination |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
carbon stable isotope ratio d13C carbon-13 atom isotope |
scope note | |
has exact match | Delta C13 |
has close match | |
has related match | |
examples |
exact match: Leaf carbon isotope signature (delta 13C) [TRY:89] (https://www.try-db.org/de/de.php) related match: Integrated water-use efficiency [BROT:16] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0003012 |
Stem stable carbon isotope composition (delta13C)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0003013 |
alternative label | stem_delta13C |
description |
Carbon stable isotope ratio [ECSO:00001142], d13C [ECSO:00000669], of stems [PO:0009047]. Carbon stable isotope ratio, d13C, of stems. |
comments | delta13C is calculated as the ratio of, 13C/12C in a sample to 13C/12C in a standard, minus 1. The result is expressed in parts per thousand, commonly referred to as per mille. A more negative value for delta13C indicates the sample has a lower ratio of 13C/12C relative to the standard. |
value type | continuous variable |
unit |
{delta}[ppth] parts per thousand |
minAllowedValue | -50 |
maxAllowedValue | 0 |
has broader | stable isotope ratio determination |
plant structure | stem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
carbon stable isotope ratio d13C carbon-13 atom isotope |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Stem carbon isotope ratio (delta 13C) [TRY:4049] (https://www.try-db.org/de/de.php) related match: Integrated water-use efficiency [BROT:16] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 29/03/2023 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0003013 |
Root stable carbon isotope composition (delta13C)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0003014 |
alternative label | root_delta13C |
description |
Carbon stable isotope ratio [ECSO:00001142], d13C [ECSO:00000669], of roots [PO:0009005]. Carbon stable isotope ratio, d13C, of roots. |
comments | delta13C is calculated as the ratio of, 13C/12C in a sample to 13C/12C in a standard, minus 1. The result is expressed in parts per thousand, commonly referred to as per mille. A more negative value for delta13C indicates the sample has a lower ratio of 13C/12C relative to the standard. |
value type | continuous variable |
unit |
{delta}[ppth] parts per thousand |
minAllowedValue | -50 |
maxAllowedValue | 0 |
has broader | stable isotope ratio determination |
plant structure | root |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
carbon stable isotope ratio d13C carbon-13 atom isotope |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Root carbon isotope signature (delta 13C) [TRY:90] (https://www.try-db.org/de/de.php) related match: Integrated water-use efficiency [BROT:16] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0003014 |
Wood stable carbon isotope composition (delta13C)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0003015 |
alternative label | wood_delta13C |
description |
Carbon stable isotope ratio [ECSO:00001142], d13C [ECSO:00000669], of wood [NCIT:C93062]. Carbon stable isotope ratio, d13C, of wood. |
comments | delta13C is calculated as the ratio of, 13C/12C in a sample to 13C/12C in a standard, minus 1. The result is expressed in parts per thousand, commonly referred to as per mille. A more negative value for delta13C indicates the sample has a lower ratio of 13C/12C relative to the standard. |
value type | continuous variable |
unit |
{delta}[ppth] parts per thousand |
minAllowedValue | -50 |
maxAllowedValue | 0 |
has broader | stable isotope ratio determination |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
carbon stable isotope ratio d13C wood carbon-13 atom isotope |
scope note | |
has exact match | Wood Carbon content |
has close match | |
has related match | |
examples |
exact match: Wood carbon (C) isotope signature (delta 13C) [TRY:1213] (https://www.try-db.org/de/de.php) related match: Integrated water-use efficiency [BROT:16] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0003015 |
Bark stable nitrogen isotope composition (delta15N)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0003031 |
alternative label | bark_delta15N |
description |
Nitrogen stable isotope ratio [ECSO:00001737], d15N [ECSO:00001738], of bark [PO:0004518]. Nitrogen stable isotope ratio, d15N, of bark. |
comments | delta15N is calculated as the ratio of, 15N/14N in a sample to 15N/14N in a standard, minus 1. The result is expressed in parts per thousand, commonly referred to as per mille. A lower value for delta15N indicates the sample has a lower ratio of 15N/14N relative to the standard. |
value type | continuous variable |
unit |
{delta}[ppth] parts per thousand |
minAllowedValue | -25 |
maxAllowedValue | 75 |
has broader | stable isotope ratio determination |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
stable nitrogen isotope ratio d15N nitrogen-15 atom isotope |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Bark nitrogen (N) isotope signature (delta 15N) [TRY:832] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0003031 |
Leaf stable nitrogen isotope composition (delta15N)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0003032 |
alternative label | leaf_delta15N |
description |
Nitrogen stable isotope ratio [ECSO:00001737], d15N [ECSO:00001738], of leaves [PO:0025034]. Nitrogen stable isotope ratio, d15N, of leaves. |
comments | delta15N is calculated as the ratio of, 15N/14N in a sample to 15N/14N in a standard, minus 1. The result is expressed in parts per thousand, commonly referred to as per mille. A lower value for delta15N indicates the sample has a lower ratio of 15N/14N relative to the standard. |
value type | continuous variable |
unit |
{delta}[ppth] parts per thousand |
minAllowedValue | -25 |
maxAllowedValue | 75 |
has broader | stable isotope ratio determination |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
stable nitrogen isotope ratio d15N nitrogen-15 atom isotope |
scope note | |
has exact match | Delta 15N |
has close match | |
has related match | |
examples | exact match: Leaf nitrogen (N) isotope signature (delta 15N) [TRY:78] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0003032 |
Stem stable nitrogen isotope composition (delta15N)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0003033 |
alternative label | stem_delta15N |
description |
Nitrogen stable isotope ratio [ECSO:00001737], d15N [ECSO:00001738], of stems [PO:0009047]. Nitrogen stable isotope ratio, d15N, of stems. |
comments | delta15N is calculated as the ratio of, 15N/14N in a sample to 15N/14N in a standard, minus 1. The result is expressed in parts per thousand, commonly referred to as per mille. A lower value for delta15N indicates the sample has a lower ratio of 15N/14N relative to the standard. |
value type | continuous variable |
unit |
{delta}[ppth] parts per thousand |
minAllowedValue | -25 |
maxAllowedValue | 75 |
has broader | stable isotope ratio determination |
plant structure | stem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
stable nitrogen isotope ratio d15N nitrogen-15 atom isotope |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Root nitrogen (N) isotope signature (delta 15N) [TRY:81] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 29/03/2023 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0003033 |
Root stable nitrogen isotope composition (delta15N)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0003034 |
alternative label | root_delta15N |
description |
Nitrogen stable isotope ratio [ECSO:00001737], d15N [ECSO:00001738], of roots [PO:0009005]. Nitrogen stable isotope ratio, d15N, of roots. |
comments | delta15N is calculated as the ratio of, 15N/14N in a sample to 15N/14N in a standard, minus 1. The result is expressed in parts per thousand, commonly referred to as per mille. A lower value for delta15N indicates the sample has a lower ratio of 15N/14N relative to the standard. |
value type | continuous variable |
unit |
{delta}[ppth] parts per thousand |
minAllowedValue | -25 |
maxAllowedValue | 75 |
has broader | stable isotope ratio determination |
plant structure | root |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
stable nitrogen isotope ratio d15N nitrogen-15 atom isotope |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Root nitrogen (N) isotope signature (delta 15N) [TRY:81] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0003034 |
Wood stable nitrogen isotope composition (delta15N)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0003035 |
alternative label | wood_delta15N |
description |
Nitrogen stable isotope ratio [ECSO:00001737], d15N [ECSO:00001738], of wood [NCIT:C93062]. Nitrogen stable isotope ratio, d15N, of wood. |
comments | delta15N is calculated as the ratio of, 15N/14N in a sample to 15N/14N in a standard, minus 1. The result is expressed in parts per thousand, commonly referred to as per mille. A lower value for delta15N indicates the sample has a lower ratio of 15N/14N relative to the standard. |
value type | continuous variable |
unit |
{delta}[ppth] parts per thousand |
minAllowedValue | -25 |
maxAllowedValue | 75 |
has broader | stable isotope ratio determination |
plant structure plant structure |
stem wood, secondary xylem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
stable nitrogen isotope ratio d15N wood nitrogen-15 atom isotope |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Wood nitrogen (N) isotope signature (delta 15N) [TRY:1230] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0003035 |
Leaf xylem stable nitrogen isotope composition (delta15N)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0003052 |
alternative label | leaf_xylem_delta15N |
description |
Nitrogen stable isotope ratio [ECSO:00001737], d15N [ECSO:00001738], of xylem sap [PO:0025539] from leaf [PO:0025034] xylem vessels [PO:0025417]. Nitrogen stable isotope ratio, d15N, of xylem sap from leaf xylem vessels. |
comments | delta15N is calculated as the ratio of, 15N/14N in a sample to 15N/14N in a standard, minus 1. The result is expressed in parts per thousand, commonly referred to as per mille. A lower value for delta15N indicates the sample has a lower ratio of 15N/14N relative to the standard. |
value type | continuous variable |
unit |
{delta}[ppth] parts per thousand |
minAllowedValue | -25 |
maxAllowedValue | 75 |
has broader | stable isotope ratio determination |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
stable nitrogen isotope ratio d15N xylem vessel nitrogen-15 atom isotope xylem sap |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0003052 |
Root xylem stable nitrogen isotope composition (delta15N)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0003053 |
alternative label | root_xylem_delta15N |
description |
Nitrogen stable isotope ratio [ECSO:00001737], d15N [ECSO:00001738], of xylem sap [PO:0025539] from root [PO:0009005] xylem vessels [PO:0025417]. Nitrogen stable isotope ratio, d15N, of xylem sap from root xylem vessels. |
comments | delta15N is calculated as the ratio of, 15N/14N in a sample to 15N/14N in a standard, minus 1. The result is expressed in parts per thousand, commonly referred to as per mille. A lower value for delta15N indicates the sample has a lower ratio of 15N/14N relative to the standard. |
value type | continuous variable |
unit |
{delta}[ppth] parts per thousand |
minAllowedValue | -25 |
maxAllowedValue | 75 |
has broader | stable isotope ratio determination |
plant structure | root |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
stable nitrogen isotope ratio d15N xylem vessel nitrogen-15 atom isotope xylem sap |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0003053 |
Leaf stable oxygen isotope composition (delta18O)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0003072 |
alternative label | leaf_delta18O |
description |
Oxygen stable isotope ratio [ECSO:00001740], d18O [ECSO:00001677], of leaves [PO:0025034]. Oxygen stable isotope ratio, d18O, of leaves. |
comments | delta18O is calculated as the ratio of, 18O/16O in a sample to 18O/16O in a standard, minus 1. The result is expressed in parts per thousand, commonly referred to as per mille. A lower value for delta18O indicates the sample has a lower ratio of 18O/16O relative to the standard. |
value type | continuous variable |
unit |
{delta}[ppth] parts per thousand |
minAllowedValue | -10 |
maxAllowedValue | 50 |
has broader | stable isotope ratio determination |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
stable oxygen isotope ratio d18O oxygen-18 atom |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf oxygen (O) isotope signature (delta 18O) [TRY:3358] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0003072 |
Stem water stable oxygen isotope composition (delta18O)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0003092 |
alternative label | stem_water_delta18O |
description |
Oxygen stable isotope ratio [ECSO:00001740], d18O [ECSO:00001677], of water [CHEBI:15377] in stems [PO:0009047]. Oxygen stable isotope ratio, d18O, of water in stems. |
comments | delta18O is calculated as the ratio of, 18O/16O in a sample to 18O/16O in a standard, minus 1. The result is expressed in parts per thousand, commonly referred to as per mille. A lower value for delta18O indicates the sample has a lower ratio of 18O/16O relative to the standard. |
value type | continuous variable |
unit |
{delta}[ppth] parts per thousand |
minAllowedValue | -10 |
maxAllowedValue | 50 |
has broader | stable isotope ratio determination |
plant structure | stem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
stable oxygen isotope ratio d18O water oxygen-18 atom d18O in water |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0003092 |
Plant canopy width
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010021 |
alternative label | plant_width |
description |
A whole plant morphology trait [TO:0000398] which is the maximum [NCIT:C25564] width [PATO:0000600] dimension of a plant canopy [ENVO:01001242] for a taxon [NCIT:C40098] in a given population [PCO:0000001] or location [NCIT:C25341]. This is a plant’s larger [NCIT:C49508] width dimension and is orthogonal to its height and breadth. Maximum width dimension of a plant’s vegetative canopy for a taxon in a given location; this is the larger width dimension and is orthogonal to its height and breadth. |
comments | This trait is not meant to document the width of all individuals sampled, but instead the maximum width for a typical mature individual within a population or across a taxon. |
value type | continuous variable |
unit |
m metre |
minAllowedValue | 0.001 |
maxAllowedValue | 20 |
has broader | whole plant morphology trait |
plant structure | whole plant |
measured characteristic |
width size |
keyword |
canopy vegetation |
scope note | |
has exact match | plant width |
has close match | Crown size |
has related match | |
examples | exact match: Crown (canopy) width [TRY:325] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010021 |
Plant canopy breadth
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010022 |
alternative label | plant_breadth |
description |
A whole plant morphology trait [TO:0000398] which is the smaller [NCIT:C25376] width [PATO:0000600] dimension of a plant canopy [ENVO:01001242]. Shortest width dimension of a plant’s vegetative canopy; orthogonal to its height and width. |
comments | This trait is not meant to document the breadth of all individuals sampled, but instead the maximum breadth for a typical mature individual within a population or across a taxon. |
value type | continuous variable |
unit |
m metre |
minAllowedValue | 0.001 |
maxAllowedValue | 20 |
has broader | whole plant morphology trait |
plant structure | whole plant |
measured characteristic |
width size |
keyword |
canopy vegetation |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010022 |
Plant vegetative height
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010023 |
alternative label | plant_height |
description |
A whole plant morphology trait [TO:0000398] which is the maximum [NCIT:C25564] vertical [PATO:0001854] height [PATO:0000119] of the vegetative shoot system [PO:0025607] for a taxon [NCIT:C40098] in a given population [PCO:0000001] or location [NCIT:C25341]. Maximum vertical height of the vegetative shoot system for a taxon in a given location. |
comments | This trait is not meant to document the height of all individuals sampled, but instead the maximum height for a typical mature individual within a population or across a taxon. The trait should only be scored for self-supporting plants, not climbers whose height is dependent on the surrounding vegetation. The documented height should be the maximum height achieved by vegetative shoots, not the height reached by reproductive shoots, as it represents the plant’s access to light. |
value type | continuous variable |
unit |
m metre |
minAllowedValue | 0.001 |
maxAllowedValue | 130 |
has broader | whole plant morphology trait |
plant structure plant structure |
whole plant stem |
measured characteristic |
height size |
keyword |
canopy vegetation vegetative shoot system |
scope note | self-supporting plants |
has exact match |
Tree height Tree height plant height |
has close match | plant height |
has related match | |
examples |
exact match: Plant height vegetative [TOP69] (https://top-thesaurus.org/index) exact match: Plant height vegetative [TRY:3106] (https://www.try-db.org/de/de.php) exact match: Plant_height_max [GIFT:1.6.2] (https://gift.uni-goettingen.de) exact match: maximum whole plant height [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: whole plant height [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) related match: minimum whole plant height [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Average height [BROT:10] (http://doi.org/10.1038/sdata.2018.135) exact match: MaxStemHeight_m [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) |
references |
Pérez-Harguindeguy 2013 Falster 2003a |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010023 |
Stem diameter at breast height
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010024 |
alternative label | plant_diameter_breast_height |
description |
A stem morphology trait [TO:0000361] which is the maximum [NCIT:C25564] diameter at breast height [ECSO:00000549] for a taxon [NCIT:C40098] in a given population [PCO:0000001] or location [NCIT:C25341]. Maximum diameter at breast height (DBH) for a taxon in a given location. It is commonly referred to as ‘DBH’. |
comments | This trait is always meant to be measured at ‘breast height’, 1.4 m above the ground surface. However, for short plants this will not always be the case, so it is advised to read the methods to confirm at what height plant diameters have been recorded. This trait is not meant to document the DBH of all individuals sampled, but instead the maximum DBH for a typical mature individual within a population or across a taxon. |
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 5000 |
has broader | stem morphology trait |
plant structure plant structure |
stem whole plant |
measured characteristic |
diameter size |
keyword |
tree diameter at breast height vegetation |
scope note | |
has exact match |
Stem diameter tree breast height diameter |
has close match |
Stem diameter stem diameter |
has related match | |
examples |
exact match: Stem diameter [TRY:21] (https://www.try-db.org/de/de.php) exact match: DBH_max [GIFT:1.8.2] (https://gift.uni-goettingen.de) exact match: diameter at breast height (1.3 m) [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: MaxStemDia_cm [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | basal_diameter |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010024 |
Stem count
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010025 |
alternative label | stem_count |
description |
A shoot system morphology trait [TO:0000077] which is the count [NCIT:C25463] of stems [PO:0009047] on multi-stemmed plants [PO:0000003]. Count of stems on multi-stemmed plants. |
comments | |
value type | continuous variable |
unit | {count} |
minAllowedValue | 0 |
maxAllowedValue | 5 |
has broader | stem morphology trait |
plant structure | stem |
measured characteristic |
has number of count |
keyword | branchiness |
scope note | |
has exact match | stem number |
has close match | |
has related match | |
examples | close match: Plant biomass and allometry: Shoots per plant [TRY:1034] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | stem_count_categorical |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010025 |
Height of a climbing plant
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010026 |
alternative label | plant_height_climbing_plant |
description |
A whole plant morphology trait [TO:0000398] which is the maximum [NCIT:C25564] vertical [PATO:0001854] height [PATO:0000119] of the vegetative shoot system [PO:0025607] of a climbing plant that is not self-supporting and therefore has a height that depends on the surrounding vegetation. Maximum vertical height of the vegetative shoot system of a non-self-supporting taxon (i.e. a vine, liana, or other climbing plant) in a given location. |
comments | While this trait is intended to indicate the height of climbing plants, the height of an epiphyte relative to the soil surface could also be documented here. All heights reported for this trait will be dependent on the height of the surrounding vegetation. |
value type | continuous variable |
unit |
m metre |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | whole plant morphology trait |
plant structure | whole plant |
measured characteristic |
height size |
keyword |
canopy vegetation vegetative shoot system |
scope note | applicable to plants that are not self-supporting |
has exact match | |
has close match | |
has related match | plant height |
examples |
related match: Plant height [TRY:18] (https://www.try-db.org/de/de.php) related match: Average height [BROT:10] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010026 |
Plant reproductive height
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010027 |
alternative label | plant_height_reproductive |
description |
A whole plant morphology trait [TO:0000398] which is the maximum [NCIT:C25564] vertical [PATO:0001854] height [PATO:0000119] of the reproductive shoot system [PO_0025082]. Maximum vertical height of the reproductive shoot system for a taxon in a given location. |
comments |
This trait can be scored for any species, but is intended as an alternative to plant_height (maximum vegetative height) for species that do not have vegetative stems, but instead only leaves and reproductive stems that extend past the soil surface.
|
value type | continuous variable |
unit |
m metre |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | whole plant morphology trait |
plant structure | whole plant |
measured characteristic |
height size |
keyword |
vegetation reproductive shoot system |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | related match: Plant height [TRY:18] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 03/06/2025 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010027 |
Stem length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010028 |
alternative label | stem_length |
description |
A shoot system morphology trait [TO:0000077] which is the maximum [NCIT:C25564] length [PATO_0000122] of a plant’s stems [PO_0009047]. Maximum length or extent of a plant’s stems. |
comments |
This trait can be scored for any species, but is intended as an alternative to plant_height (maximum vegetative height) for species that are prostrate, crawling, creeping or similar.
|
value type | continuous variable |
unit |
m metre |
minAllowedValue | 0.01 |
maxAllowedValue | 10 |
has broader | stem morphology trait |
plant structure plant structure |
stem whole plant |
measured characteristic |
length size |
keyword |
vegetation vegetative shoot system |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Stem length [TRY:326] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 03/06/2025 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010028 |
Plant spinescence
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010070 |
alternative label | plant_spinescence |
description |
A plant structure morphology trait [TO:0000839] which summarises the extent of physical structures a plant uses for defence [NCIT:C61556], including the size [PATO:0000117], strength [PATO:0001230], and density [PATO:0001019] of spine leaves [PO:0025173], spine stipules [PO:0025174], thorns [PO:0025172], and/or prickles [PO:0025169] and the pain [HP:0012531] inflicted by these structures. Degree to which a plant is defended by spines, thorns and/or prickles, as defined by P<U+00C3><U+00A9>rez-Harguindeguy et al. 2013. |
comments |
The values for this trait are exactly those defined by P<U+00C3><U+00A9>rez-Harguindeguy et al. 2013 (doi:10.1071/BT12225). See the trait plant_physical_defence for individual plant structures a plant uses for physical defence.
|
value type | categorical variable |
has narrower |
plant_spinescence_no_spines No spines. (level 0) plant_spinescence_low_density_soft_spines Low or very local density of soft spines <5mm long; plant may sting or prickle when hit carelessly but not impart strong pain. (level 1) plant_spinescence_high_density_soft_spines High density of soft spines, intermediate density of spines of intermediate hardness, or low density of hard, sharp spines >5mm long; plant causes actual pain when hit carelessly. (level 2) plant_spinescence_high_density_hard_spines_to_5mm Intermediate or high density of hard, sharp spines >5mm long; plant causes strong pain when hit carelessly. (level 3) plant_spinescence_high_density_hard_spines_to_20mm Intermediate or high density of hard, sharp spines >20mm long; plant may cause significant wounds when hit carelessly. (level 4) plant_spinescence_high_density_hard_spines_to_100mm Intermediate or high density of hard, sharp spines >100mm long; plant is dangerous to careless large mammals, including humans. (level 5) |
has broader |
leaf shape trait whole plant phenotype trait plant structure morphology trait |
plant structure plant structure plant structure |
leaf stem whole plant |
measured characteristic |
structure surface feature shape |
keyword |
spine leaf spine stipule thorn prickle defense pain spiny |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
close match: Leaf emergences (pubescence, pruinescence, hairs, spines, thorns) [TRY:677] (https://www.try-db.org/de/de.php) close match: Spinescence [BROT:21] (http://doi.org/10.1038/sdata.2018.135) close match: Armature [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) |
references | Pérez-Harguindeguy 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | spinescence |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010070 |
Embryo colour
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010110 |
alternative label | embryo_colour |
description |
A plant embryo cotyledon morphology trait [TO:0000775] which is the colour [PATO:0000014] of the plant embryo cotyledon [PO:0025470]. Binary variable distinguishing between embryos that are green versus colourless. |
comments | |
value type | categorical variable |
has narrower |
embryo_colour_colourless Colourless embryo. embryo_colour_green Green embryo. |
has broader | plant embryo morphology trait |
plant structure | whole plant |
measured characteristic | colour / color |
keyword |
plant embryo cotyledon plant embryo |
scope note | |
has exact match | plant embryo cotyledon color |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010110 |
Cotyledon function
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010111 |
alternative label | cotyledon_function |
description |
A plant embryo morphology trait [TO:0000064] which indicates if the cotyledons [PO:0020030] have a photosynthesis [GO:0015979] or energy [PATO:0001021] storage [OBI:0302893] function [NCIT:C25518]. Binary variable distinguishing between cotyledons that function as leaves and can photosynthesise versus ones that function as energy reserve organs. |
comments | |
value type | categorical variable |
has narrower |
cotyledon_function_foliaceous Cotyledons are photosynthetic and function as leaves. cotyledon_function_reserve Cotyledons function as energy reserve organs. |
has broader |
plant embryo morphology trait leaf morphology trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
organismal quality function |
keyword |
cotyledon photosynthesis energy storage plant embryo seedling plant embryo cotyledon storage organ |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010111 |
Cotyledon position at germination
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010112 |
alternative label | cotyledon_position |
description |
A plant embryo morphology trait [TO:0000064] which indicates if the cotyledons [PO:0020030] emerge from the seed coat [PO:0009088] at germination [GO:0009845]. Binary variable distinguishing between seedlings where the cotyledon remains within the seed coat versus emerges from the seed coat at germination. |
comments | |
value type | categorical variable |
has narrower |
cotyledon_position_cryptocotylar A type of seed germination in which the cotyledons remain within the seed coat at germination. cotyledon_position_phanerocotylar A type of seed germination in which the cotyledons emerge from the seed coat. |
has broader | plant embryo morphology trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
organismal quality structure position |
keyword |
cotyledon seed coat seed germination plant embryo seedling plant embryo cotyledon |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010112 |
Cotyledon hairiness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010113 |
alternative label | cotyledon_hairs |
description |
A plant embryo cotyledon morphology trait [TO:0000775] which is the pilosity [PATO:0000066] of the cotyledons [PO:0020030]. Binary variable distinguishing between glabrous versus hairy cotyledons. |
comments | |
value type | categorical variable |
has narrower |
cotyledon_hairs_glabrous Cotyledons lack hairs. cotyledon_hairs_hairy Cotyledons have hairs. |
has broader | plant embryo morphology trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
texture pilosity |
keyword |
cotyledon plant embryo hairy seedling plant embryo cotyledon trichome |
scope note | |
has exact match | cotyledon pilosity |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010113 |
Hypocotyl hairiness
Seedling first true leaf type
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010160 |
alternative label | seedling_first_node_leaf_type |
description |
A plant embryo true leaf formation stage [PO:0001095] morphology trait which is whether the leaf [PO:0025034] at the first stem node [PO:0020141] above the epicotyl [PO:0020035] in a true leaf or a scale leaf. Binary variable distinguishing between seedlings where the first leaf is scale-like (cataphyll) versus leaf-like. |
comments | |
value type | categorical variable |
has narrower |
seedling_first_node_leaf_type_scale-like The leaf at the first stem node above the epicotyl is scale-like, also referred to as a cataphyll. seedling_first_node_leaf_type_leaf-like The leaf at the first stem node above the epicotyl is leaf-like (broad). |
has broader | plant embryo morphology trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
organismal quality structure |
keyword |
plant embryo true leaf formation stage stem node epicotyl seedling |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | seedling_first_leaf |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010160 |
Seedling first node leaf count
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010161 |
alternative label | seedling_first_node_leaf_count |
description |
A plant embryo true leaf formation stage [PO:0001095] morphology trait which is the leaf count [NCIT:C25463] at the first stem node [PO:0020141] above the epicotyl [PO:0020035]. Binary variable distinguishing between seedlings where the leaves at the first node are single versus paired. |
comments | |
value type | categorical variable |
has narrower |
seedling_first_node_leaf_count_single There is a single leaf at the first stem node above the epicotyl. seedling_first_node_leaf_count_paired There is a pair of leaves at the first stem node above the epicotyl. |
has broader | plant embryo morphology trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
has number of count |
keyword |
plant embryo true leaf formation stage stem node epicotyl seedling |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | seedling_first_node |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010161 |
Seedling germination location
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0010162 |
alternative label | seedling_germination_location |
description |
A plant embryo cotyledon morphology trait [TO:0000775] which is the position [PATO:0000140] of seed germination [GO:0009845] relative to the soil surface. Binary variable distinguishing between seedlings that germinate above versus below ground. |
comments | |
value type | categorical variable |
has narrower |
seedling_germination_location_epigeal Germinant with one or more cotyledons emerging aboveground. seedling_germination_location_hypogeal Germinant with all cotyledons remaining belowground. |
has broader | plant embryo morphology trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
organismal quality position |
keyword |
seed germination plant embryo seedling |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0010162 |
Leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011211 |
alternative label | leaf_area |
description |
A leaf area trait [TO:0000540] which is the 2-D [PATO:0001709] area [PATO:0001323] of the leaf lamina [PO:0020039] and petiole [PO:0020038]. For some species the area of a leaf analogue is reported, possibly a leaflet [PO:0020049], cladode [PO:0025354], or phyllode [PO:0025335]. The 2-dimensional projected (scanned) area of the surface of a leaf or a leaf analogue (leaflet, cladode, phyllode). |
comments |
This trait includes measurements of leaves and leaf analogues, including leaflets, cladodes, and phyllodes. When a measurement is made on a leaf analogue, the tissue measured should be documented as part of the methods or noted as a context or under measurement_remarks . Leaflet area can alternatively be mapped to the trait leaflet_area . It is most common for leaf area measurements to include the petiole; the measurement methods should indicate if the petiole is included in or excluded from the leaf area measurements. For terete leaves, leaf area should still be recorded as the 2-dimensional projected area.
|
value type | continuous variable |
unit |
mm2 square millimetre |
minAllowedValue | 0.1 |
maxAllowedValue | 1e+07 |
has broader | leaf size trait |
plant structure | leaf |
measured characteristic |
area 2-D extent size |
keyword |
leaf lamina petiole leaflet cladode phyllode |
scope note | Plants with leaves. |
has exact match |
leaf area trait Leaf area |
has close match | |
has related match | leaf size |
examples |
exact match: Leaf area [TOP25] (https://top-thesaurus.org/index) exact match: Leaf area (in case of compound leaves: leaf, undefined if petiole in- or excluded) [TRY:3112] (https://www.try-db.org/de/de.php) close match: Leaf size SLA, leaf mass & LDMC [LEDA:2.1] (https://uol.de/en/landeco/research/leda/standards) exact match: Leaf size [GIFT:4.4] (https://gift.uni-goettingen.de) exact match: leaf area [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Average leaf area [BROT:6] (http://doi.org/10.1038/sdata.2018.135) |
references | Pérez-Harguindeguy 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011211 |
Leaflet area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011212 |
alternative label | leaflet_area |
description |
A leaf area trait [TO:0000540] which is the 2-D [PATO:0001709] area [PATO:0001323] of a single leaflet [PO:0020049] lamina [PO:0025060]. This measurement will not include the petiole [PO:0020038]. The 2-dimensional projected (scanned) area of the surface of the lamina of a single leaflet. |
comments | |
value type | continuous variable |
unit |
mm2 square millimetre |
minAllowedValue | 0.1 |
maxAllowedValue | 1e+06 |
has broader | leaf size trait |
plant structure | leaf |
measured characteristic |
area 2-D extent size |
keyword |
leaflet leaf lamina |
scope note | |
has exact match | leaflet area |
has close match | |
has related match | leaf size |
examples |
close match: leaf area [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) close match: Average leaf area [BROT:6] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011212 |
Leaf length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011213 |
alternative label | leaf_length |
description |
Length [PATO:0000122] of the leaf [PO:0025034] (including the petiole [PO:0020038]), from the leaf apex [PO:0020137] to the leaf axil [PO:0009023] (leaf base [PO:0020040]). Length of a leaf or a leaf analogue, from the leaf apex to the leaf axil (base), including the petiole. |
comments |
If a leaf analogue (leaflet, cladode, or phyllode) is measured instead of a true leaf, this should be noted as a context or under measurement_remarks .
|
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 0.1 |
maxAllowedValue | 1e+05 |
has broader | leaf size trait |
plant structure | leaf |
measured characteristic |
length size |
keyword |
petiole leaf apex leaf base leaf lamina |
scope note | Plants with leaves. |
has exact match | leaf length |
has close match | |
has related match | leaf size |
examples |
exact match: Leaf length [TOP13] (https://top-thesaurus.org/index) exact match: Leaf length [TRY:144] (https://www.try-db.org/de/de.php) exact match: Leaf length [GIFT:4.6] (https://gift.uni-goettingen.de) close match: maximum leaf length [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) close match: minimum leaf length [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) close match: Max_Blade_Length_m [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) close match: Max_Rachis_Length_m [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) close match: Max_Petiole_length_m [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) |
references | Pérez-Harguindeguy 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011213 |
Leaf width
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011214 |
alternative label | leaf_width |
description |
The maximum [NCIT:C25564] width [PATO:0000921] axis of a leaf [PO:0025034] measured perpendicular to [PATO:0002434] the leaf length [PATO:0000122]. Maximum width axis of a leaf or a leaf analogue (a leaflet, cladode, or phyllode), measured perpendicular to the leaf length. |
comments |
This trait refers to the single line marking the maximum width of the leaf lamina. For a compound leaf the correct measure is the maximum width of the total leaf blade. It is the width measure that will be reported in taxonomic treatments. It is not the effective_leaf_width , a trait that records the diameter of the largest circle that can be drawn within the leaf lamina. If a leaf analogue (leaflet, cladode, or phyllode) is measured instead of a true leaf, this should be noted as a context or under measurement_remarks .
|
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 1e+05 |
has broader | leaf size trait |
plant structure | leaf |
measured characteristic |
width size |
keyword | leaf lamina |
scope note | Plants with leaves. |
has exact match | leaf width |
has close match | |
has related match | leaf size |
examples |
exact match: Leaf width [TOP17] (https://top-thesaurus.org/index) exact match: Leaf width [TRY:145] (https://www.try-db.org/de/de.php) exact match: Leaf width [GIFT:4.7] (https://gift.uni-goettingen.de) close match: maximum leaf width [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) close match: minimum leaf width [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011214 |
Leaf thickness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011215 |
alternative label | leaf_thickness |
description |
The thickness [PATO:0000915] of the leaf lamina [PO:0020039], measured away from the midrib [PO:0020139]. Thickness of the leaf lamina, generally measured away from the midrib. |
comments |
Leaf thickness measurements submitted from the ecological literature will generally avoid the midrib, but not avoid lower order leaf veins. In contrast, leaf thickness measurements from the taxonomic literature will usually include any veins or midribs, because in this literature leaf thickness is generally measured on succulent plants. The methods field should document whether the midrib was explicitly included, excluded, or ignored.
|
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 51 |
has broader | leaf size trait |
plant structure | leaf |
measured characteristic |
thickness size |
keyword | leaf lamina |
scope note | Plants with leaves. |
has exact match | leaf thickness |
has close match | |
has related match | |
examples |
exact match: Leaf thickness [TOP20] (https://top-thesaurus.org/index) exact match: Leaf thickness [TRY:46] (https://www.try-db.org/de/de.php) exact match: Leaf thickness [GIFT:4.8] (https://gift.uni-goettingen.de) exact match: leaf thickness [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | Pérez-Harguindeguy 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011215 |
Leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011216 |
alternative label | leaf_dry_mass |
description |
A leaf mass trait [TO:0000505] which is the dry [PATO:0001824] mass [PATO:0000125] of a leaf [PO:0025034] or leaf analogue (a leaflet [PO:0020049], cladode [PO:0025354], or phyllode [PO:0025335]). The oven dry mass of a leaf or leaf analogue (leaflet, cladode, phyllode). |
comments |
This trait includes measurements of leaves and leaf analogues, including leaflets, cladodes, and phyllodes. When a measurement is made on a leaf analogue, the tissue measured should be documented as part of the methods or noted as a context or under measurement_remarks . Leaflet dry mass can alternatively be mapped to the trait leaflet_dry_mass . It is most common for leaf dry mass measurements to include the petiole; the measurement methods should indicate if the petiole is included in or excluded from the leaf dry mass measurements.
|
value type | continuous variable |
unit |
mg milligram |
minAllowedValue | 0.01 |
maxAllowedValue | 15000 |
has broader | leaf mass trait |
plant structure | leaf |
measured characteristic | mass |
keyword |
leaf weight, leaf mass leaflet cladode phyllode |
scope note | |
has exact match |
leaf dry weight, leaf dry mass Leaf dry mass |
has close match | |
has related match | leaf size |
examples |
exact match: Leaf dry mass [TOP40] (https://top-thesaurus.org/index) exact match: Leaf dry mass (single leaf) [TRY:55] (https://www.try-db.org/de/de.php) close match: Leaf size SLA, leaf mass & LDMC [LEDA:2.1] (https://uol.de/en/landeco/research/leda/standards) exact match: leaf dry mass [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | Pérez-Harguindeguy 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011216 |
Leaflet dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011217 |
alternative label | leaflet_dry_mass |
description |
A leaf dry mass trait [TO:0001014] which is the dry mass of a single leaflet [PO:0020049]. This measurement will not include the petiole [PO:0020038]. The oven dry mass of a single leaflet. |
comments | |
value type | continuous variable |
unit |
mg milligram |
minAllowedValue | 0.005 |
maxAllowedValue | 15000 |
has broader | leaf mass trait |
plant structure | leaf |
measured characteristic | mass |
keyword |
leaflet leaf weight, leaf mass |
scope note | |
has exact match | |
has close match | leaflet weight |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011217 |
Leaf fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011218 |
alternative label | leaf_fresh_mass |
description |
A leaf mass trait [TO:0000505] which is the mass [PATO:0000125] of a fresh [EnvThes:21976] leaf [PO:0025034], indicating its mass at the time it is picked. For some species the mass of a leaf analogue is reported, possibly a leaflet [PO:0020049], cladode [PO:0025354], or phyllode [PO:0025335]. The fresh mass of a leaf or leaf analogue (leaflet, cladode, phyllode). |
comments |
This trait includes measurements of leaves and leaf analogues, including leaflets, cladodes, and phyllodes. When a measurement is made on a leaf analogue, the tissue measured should be documented as part of the methods or noted as a context or under measurement_remarks . It is most common for leaf fresh mass measurements to include the petiole; the measurement methods should indicate if the petiole is included in or excluded from the leaf fresh mass measurements. A source of variation for this trait will be how leaves are stored and if they are partially rehydrated before weighing; these details should be documented in the methods.
|
value type | continuous variable |
unit |
mg milligram |
minAllowedValue | 0.1 |
maxAllowedValue | 30000 |
has broader | leaf mass trait |
plant structure | leaf |
measured characteristic | mass |
keyword |
leaf weight, leaf mass leaflet cladode phyllode |
scope note | Plants with leaves |
has exact match | leaf wet weight |
has close match | |
has related match | |
examples |
exact match: Leaf fresh mass [TOP35] (https://top-thesaurus.org/index) exact match: Leaf fresh mass [TRY:163] (https://www.try-db.org/de/de.php) exact match: leaf fresh mass [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | Pérez-Harguindeguy 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011218 |
Petiole length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011219 |
alternative label | petiole_length |
description |
Length [PATO:0000122] of the petiole [PO:0020038]), from the leaf base [PO:0020040] to the leaf axil [PO:0009023]. Length of the petiole from the leaf base to the leaf axil. |
comments | |
value type | continuous variable |
unit | cm |
minAllowedValue | 0 |
maxAllowedValue | 1000 |
has broader | leaf size trait |
plant structure | leaf |
measured characteristic |
length size |
keyword | petiole |
scope note | |
has exact match |
petiole length Petiole length |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 31/05/2023 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011219 |
Petiole width
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011220 |
alternative label | petiole_width |
description |
Width [PATO:0000921] of the petiole [PO:0020038]. Width of the petiole. |
comments | |
value type | continuous variable |
unit | cm |
minAllowedValue | 0 |
maxAllowedValue | 200 |
has broader | leaf size trait |
plant structure | leaf |
measured characteristic |
width size |
keyword | petiole |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 31/05/2023 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011220 |
Number of leaflets per leaf
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011221 |
alternative label | leaflet_count |
description |
A leaf morphology trait [TO:0000748] which is the count [NCIT:C25463] of leaflets [PO:0020049] in a compound leaf [PO:0020043]. The count of leaflets that comprise a single leaf . |
comments | |
value type | continuous variable |
unit | {count} |
minAllowedValue | 1 |
maxAllowedValue | 1000 |
has broader | leaf morphology trait |
plant structure plant structure |
leaf leaflet |
measured characteristic |
has number of count |
keyword |
leaflet compound leaf morphology trait compound leaf |
scope note | |
has exact match | leaflet number |
has close match | |
has related match | |
examples | exact match: Leaflet number per leaf [TRY:759] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 31/03/2025 |
date modified | 31/03/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011221 |
Leaflet length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011222 |
alternative label | leaflet_length |
description |
A leaf morphology trait [TO:0000748] which is length [PATO:0000122] of a leaflet [PO:0020049], from the leaflet apex [PO:0020137] to where the leaflet attaches to the leaf [PO:0025034] rachis [PO:020055]. The length of a single leaflet comprising a botanical leaf. |
comments | This trait is intended to only apply to compound leaves, those with multiple leaflets per botanical leaf. |
value type | continuous variable |
unit | cm |
minAllowedValue | 0.1 |
maxAllowedValue | 10 |
has broader | leaf size trait |
plant structure plant structure |
leaf leaflet |
measured characteristic |
length size |
keyword |
leaflet compound leaf morphology trait compound leaf |
scope note | applicable to plants with compound leaves. |
has exact match | leaflet length |
has close match | |
has related match | |
examples |
exact match: Leaflet_length [TOP14] (https://top-thesaurus.org/index) exact match: Leaflet length [TRY:985] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011222 |
Leaflet width
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011223 |
alternative label | leaflet_width |
description |
A leaf morphology trait [TO:0000748] which is the maximum [NCIT:C25564] width [PATO:0000921] axis of a single leaflet [PO:0020049] measured perpendicular to [PATO:0002434] the leaflet length [PATO:0000122]. Maximum width axis of a single leaflet, measured perpendicular to the leaflet length. |
comments | This trait is intended to only apply to compound leaves, those with multiple leaflets per botanical leaf. |
value type | continuous variable |
unit | cm |
minAllowedValue | 0.1 |
maxAllowedValue | 10 |
has broader | leaf size trait |
plant structure plant structure |
leaf leaflet |
measured characteristic |
width size |
keyword |
leaflet compound leaf morphology trait compound leaf |
scope note | applicable to plants with compound leaves. |
has exact match | leaflet width |
has close match | |
has related match | |
examples |
exact match: Leaflet_width [TOP18] (https://top-thesaurus.org/index) exact match: Leaflet width [TRY:986] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011223 |
Leaf mass per area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011230 |
alternative label | leaf_mass_per_area |
description |
A leaf morphology trait [TO:0000748] which is the ratio [PATO:0001470] of the leaf dry [PATO:0001824] mass [PATO:0000125] to the leaf [PO:0025034] area [PATO:0001323], measured on an entire leaf, including the entire leaf lamina [PO:0020039] and the petiole [PO:0020038]. The ratio of leaf dry mass to leaf area, measured on an entire leaf including the petiole; LMA. (The inverse of specific leaf area, SLA.) |
comments |
Leaf mass per area includes measurements submitted as specific_leaf_area (SLA); they are simply inverted. Leaf mass per area is explicitly measured on an entire leaf, including the petiole. Measurements made on a piece of the leaf lamina, excluding petiole and midrib, are a separate trait leaf_lamina_mass_per_area . If measurements are made on the entire leaf lamina, but the petiole is excluded, this should be noted in the methods or under measurement_remarks .
|
value type | continuous variable |
unit |
g/m2 gram per square metre |
minAllowedValue | 1 |
maxAllowedValue | 3000 |
has broader |
leaf size trait leaf mass trait |
plant structure | leaf |
measured characteristic |
area ratio; proportion mass per unit area area density |
keyword |
leaf weight, leaf mass biomass allocation leaf lamina petiole |
scope note | |
has exact match |
specific leaf area Leaf mass per leaf area |
has close match | |
has related match | |
examples |
exact match: Leaf mass per area [TOP53] (https://top-thesaurus.org/index) close match: Specific leaf area [TOP50] (https://top-thesaurus.org/index) exact match: Leaf area per leaf dry mass (specific leaf area, SLA or 1/LMA): undefined if petiole is in- or exclu [TRY:3117] (https://www.try-db.org/de/de.php) exact match: Leaf area per leaf dry mass (specific leaf area, SLA or 1/LMA): petiole included [TRY:3116] (https://www.try-db.org/de/de.php) close match: Leaf size SLA, leaf mass & LDMC [LEDA:2.1] (https://uol.de/en/landeco/research/leda/standards) exact match: Specific Leaf Area (SLA) [GIFT:4.1] (https://gift.uni-goettingen.de) exact match: leaf area per leaf dry mass [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Average specific leaf area [BROT:8] (http://doi.org/10.1038/sdata.2018.135) |
references |
Pérez-Harguindeguy 2013 Wright 2004 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | specific_leaf_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011230 |
Leaf lamina mass per area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011231 |
alternative label | leaf_lamina_mass_per_area |
description |
A leaf morphology trait [TO:0000748] which is the ratio [PATO:0001470] of the leaf dry [PATO:0001824] mass [PATO:0000125] to leaf [PO:0025034] area [PATO:0001323], measured on a piece of the leaf lamina [PO:0020039] located away from major leaf lamina veins [PO:0020138]. The ratio of leaf dry mass to leaf area, measured on a piece of the leaf lamina that does not include the petiole or major veins. |
comments |
This trait only includes data made on subsamples of a leaf, usually a leaf punch sample associated with leaf strength measurements or from the herbivory literature. For whole-leaf LMA/SLA data, see the trait leaf_mass_per_area
|
value type | continuous variable |
unit |
g/m2 gram per square metre |
minAllowedValue | 0.1 |
maxAllowedValue | 500 |
has broader |
leaf size trait leaf mass trait |
plant structure | leaf |
measured characteristic |
area ratio; proportion mass per unit area area density |
keyword |
leaf weight, leaf mass biomass allocation leaf lamina |
scope note | Plants with leaves. |
has exact match | |
has close match | |
has related match | specific leaf area |
examples |
related match: Leaf mass per area [TOP53] (https://top-thesaurus.org/index) related match: Specific leaf area [TOP50] (https://top-thesaurus.org/index) exact match: Leaf area per leaf dry mass (specific leaf area, SLA or 1/LMA): petiole excluded [TRY:3115] (https://www.try-db.org/de/de.php) close match: Leaf area per leaf dry mass (specific leaf area, SLA or 1/LMA) petiole, rhachis and midrib excluded [TRY:3086] (https://www.try-db.org/de/de.php) related match: Leaf area per leaf dry mass (specific leaf area, SLA or 1/LMA): undefined if petiole is in- or exclu [TRY:3117] (https://www.try-db.org/de/de.php) related match: Leaf area per leaf dry mass (specific leaf area, SLA or 1/LMA): petiole included [TRY:3116] (https://www.try-db.org/de/de.php) related match: Leaf size SLA, leaf mass & LDMC [LEDA:2.1] (https://uol.de/en/landeco/research/leda/standards) |
references | Pérez-Harguindeguy 2013 |
date created | 31/10/2022 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011231 |
Leaf tissue density
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011232 |
alternative label | leaf_density |
description |
The ratio [PATO:0001470] of leaf [PO:0025034] dry [PATO:0001824] mass [PATO:0000125] to leaf fresh [EnvThes:21976] volume [PATO:0000918]. The ratio of leaf dry mass to leaf fresh volume. |
comments | |
value type | continuous variable |
unit |
mg/mm3 milligram per cubic millimetre |
minAllowedValue | 0.05 |
maxAllowedValue | 1.1 |
has broader | leaf mass trait |
plant structure | leaf |
measured characteristic |
mass density, density mass ratio; proportion |
keyword |
leaf weight, leaf mass biomass allocation |
scope note | |
has exact match | leaf mass density |
has close match | |
has related match | |
examples |
exact match: Leaf density [TOP56] (https://top-thesaurus.org/index) exact match: Leaf density (leaf tissue density, leaf dry mass per leaf volume) [TRY:48] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011232 |
Leaf area ratio (LAR)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011260 |
alternative label | leaf_area_ratio |
description |
A leaf area trait [TO:0000540] which is the ratio [PATO:0001470] of a plant’s [PO:0000003] total [NCIT:C25304] leaf [PO:0025034] area [PATO:0001323] to total plant dry mass [TO_0000352]. The ratio of total plant leaf area to total plant dry mass; LAR. |
comments | Since the total plant dry mass is required for leaf area ratio measurements, this is standardly measured only on young plants or plants grown for experiments where the entire plant can be harvested. It is best practice for leaf area measurements to include the petiole. |
value type | continuous variable |
unit |
mm2/mg square millimetre per milligram |
minAllowedValue | 0.05 |
maxAllowedValue | 100 |
has broader | leaf size trait |
plant structure plant structure |
leaf whole plant |
measured characteristic |
area size ratio; proportion |
keyword |
whole plant dry mass biomass allocation |
scope note | Plants with leaves. |
has exact match | leaf area ratio |
has close match | Leaf area |
has related match | |
examples |
exact match: Leaf area ratio [TOP88] (https://top-thesaurus.org/index) exact match: Leaf area per plant dry mass (leaf area ratio, LAR) [TRY:109] (https://www.try-db.org/de/de.php) |
references | Poorter & Remkes 1990 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011260 |
Leaf mass fraction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011261 |
alternative label | leaf_mass_fraction |
description |
A leaf mass trait [TO:0000505] which is the ratio [PATO:0001470] of a plant’s total leaf dry mass [APD:glossary/40080] to total plant dry mass [TO:0000352]. The ratio of leaf dry mass to total plant dry mass. |
comments | |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader | leaf mass trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
leaf weight, leaf mass biomass allocation whole plant dry mass whole plant stem dry mass |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf mass ratio [TOP85] (https://top-thesaurus.org/index) exact match: Plant biomass and allometry: Leaf dry mass per plant dry mass (leaf weight ratio, LWR) [TRY:110] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011261 |
Leaf dry matter content (LDMC)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011262 |
alternative label | leaf_dry_matter_content |
description |
A leaf mass trait [TO:0000505] which is the ratio [PATO:0001470] of leaf dry mass [TO:0001014] to leaf [PO:0025034] fresh mass [APD:glossary/40044]. The ratio of leaf dry mass to leaf fresh mass; LDMC. |
comments |
Two similar traits are leaf_water_content_per_dry_mass , the ratio of leaf water content to leaf dry mass and leaf_water_content_per_fresh_mass , the ratio of leaf water content to leaf fresh mass.
|
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.001 |
maxAllowedValue | 2 |
has broader | leaf mass trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
leaf weight, leaf mass biomass allocation fresh mass |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf dry matter content [TOP45] (https://top-thesaurus.org/index) exact match: Leaf dry mass per leaf fresh mass (leaf dry matter content, LDMC) [TRY:47] (https://www.try-db.org/de/de.php) exact match: Leaf dry matter content (LDMC) [GIFT:4.9] (https://gift.uni-goettingen.de) exact match: leaf dry mass per leaf fresh mass [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Leaf dry matter content [BROT:14] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011262 |
Leaf fresh mass per leaf area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011263 |
alternative label | leaf_fresh_mass_per_area |
description |
A leaf area trait [TO:0000540] which is the ratio [PATO:0001470] of the leaf [PO:0025034] fresh mass [APD:glossary/40044]. to the leaf area [PATO:0001323], measured on an entire leaf, including the entire leaf lamina [PO:0020039] and the petiole [PO:0020038]. The ratio of leaf fresh mass to leaf area, measured on an entire leaf including the petiole. |
comments | Leaf fresh mass per area is explicitly measured on an entire leaf, including the petiole. |
value type | continuous variable |
unit |
g/m2 gram per square metre |
minAllowedValue | 200 |
maxAllowedValue | 2000 |
has broader |
leaf size trait leaf mass trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword |
leaf weight, leaf mass biomass allocation fresh mass leaf lamina petiole |
scope note | Plants with leaves. |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf area per leaf fresh mass (specific leaf area (SLA or 1/LMA) based on leaf fresh mass) [TRY:125] (https://www.try-db.org/de/de.php) |
references | Pérez-Harguindeguy 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011263 |
Leaf water content per unit leaf area (leaf succulence)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011264 |
alternative label | leaf_water_content_per_area |
description |
A leaf mass trait [TO:0000505] which is the ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] in a fresh [EnvThes:21976] leaf [PO:0025034] to leaf area [PATO:0001323]. The ratio of the mass of water in a fresh leaf (leaf water content) to leaf surface area; leaf succulence. |
comments | |
value type | continuous variable |
unit |
g/m2 gram per square metre |
minAllowedValue | 10 |
maxAllowedValue | 5000 |
has broader | leaf mass trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion |
keyword |
leaf weight, leaf mass water leaf water content |
scope note | |
has exact match | |
has close match | tissue succulence |
has related match | leaf moisture content |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011264 |
Leaf water content per unit leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011265 |
alternative label | leaf_water_content_per_dry_mass |
description |
A leaf mass trait [TO:0000505] which is the ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] in a fresh [EnvThes:21976] leaf [PO:0025034] to leaf dry mass [TO:0001014]. The ratio of the mass of water in a fresh leaf (leaf water content) to leaf dry mass. |
comments |
A similar trait that is recorded by a greater number of studies is leaf_dry_matter_content , the ratio of a leaf dry mass to leaf fresh mass.
|
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 20 |
has broader | leaf mass trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
leaf weight, leaf mass water leaf water content |
scope note | |
has exact match | |
has close match | |
has related match | leaf moisture content |
examples | exact match: Leaf water content per leaf dry mass (not saturated) [TRY:3120] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011265 |
Leaf water content per unit leaf fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011266 |
alternative label | leaf_water_content_per_fresh_mass |
description |
A leaf mass trait [TO:0000505] which is the ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] in a fresh [EnvThes:21976] leaf [PO:0025034] to leaf fresh mass [APD:glossary/40044]. The ratio of the mass of water in a fresh leaf (leaf water content) to leaf fresh mass |
comments |
A similar trait that is recorded by a greater number of studies is leaf_dry_matter_content , the ratio of a leaf dry mass to leaf fresh mass.
|
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 10 |
has broader | leaf mass trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
leaf weight, leaf mass water leaf water content fresh mass |
scope note | |
has exact match | |
has close match | |
has related match | leaf moisture content |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011266 |
Leaf water content per unit saturated leaf mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011267 |
alternative label | leaf_water_content_per_saturated_mass |
description |
A leaf mass trait [TO:0000505] which is the ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] in a saturated leaf [PO:0025034] to the mass of a saturated leaf. A saturated leaf is one that has been hydrated to its maximum [NCIT:C25564] water holding capacity [IOBC:200906064703668091], known as full turgor [PATO:0001620]. The ratio of the mass of water in a leaf (leaf water content) to the mass of a saturated leaf. A saturated leaf is one that has been hydrated to its maximal water holding capacity and is at full turgor. |
comments | |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 10 |
has broader | leaf mass trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
leaf weight, leaf mass water leaf water content fresh mass water holding capacity turgor |
scope note | |
has exact match | |
has close match | |
has related match | leaf moisture content |
examples | close match: Leaf water content per leaf dry mass (at saturation) [TRY:3122] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011267 |
Leaf cell wall fraction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011268 |
alternative label | leaf_cell_wall_fraction |
description |
A leaf mass trait [TO:0000505] which is the ratio [PATO:0001470] of cell wall [GO:0009505] dry mass to leaf dry mass [TO:0001014]. The ratio of leaf cell wall dry mass to leaf dry mass. This is the fraction of cell wall material that can be recovered from total leaf biomass. |
comments | |
value type | continuous variable |
unit |
mg/mg milligram per milligram |
minAllowedValue | 0.1 |
maxAllowedValue | 1 |
has broader | leaf mass trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
leaf weight, leaf mass plant-type cell wall biomass allocation cell |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf cell wall mass per leaf dry mass [TRY:3375] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011268 |
Leaf type
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011310 |
alternative label | leaf_type |
description |
A leaf shape trait [TO:0000492] which is inclusive [NCIT:C166400] categories describing the shape [PATO:0000052] of a leaf [PO:0025034] as broad, needle-like, or scale-like. Variable distinguishing between general leaf form (shape) categories. |
comments |
Terms identifying the plant organ responsible for photosynthesis are mapped to the trait plant_photosynthetic_organ , while leaf_form_general only includes terms pertaining to the general form of the leaf. The trait leaf_shape provides detailed vocabulary to describe a leaf’s shape.
|
value type | categorical variable |
has narrower |
leaf_type_broadleaf Flat leaf lamina, regardless of whether the leaves are or are not toothed, lobed, or compound. leaf_type_needle Needle or awl-shaped leaf that is generally 3-dimensional. leaf_type_scale Leaf reduced to a small scale. leaf_type_leafless An adult stage plant that lacks leaves throughout the year. |
has broader | leaf shape trait |
plant structure | leaf |
measured characteristic |
shape structure |
keyword | leaf shape |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
related match: Leaf form [TOP225] (https://top-thesaurus.org/index) related match: Leaf type [TRY:43] (https://www.try-db.org/de/de.php) exact match: Leaf_form_1 [GIFT:4.11.1] (https://gift.uni-goettingen.de) close match: Basic leaf shape [BROT:5] (http://doi.org/10.1038/sdata.2018.135) |
references |
Pérez-Harguindeguy 2013 Burrows 2001 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011310 |
Leaf shape
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011311 |
alternative label | leaf_shape |
description |
A leaf shape trait [TO:0000492] which is the shape [PATO:0000052] and form of a leaf [PO:0025034], considering the ratio [PATO:0001470] of leaf length [PATO:0000122] to leaf width [PATO:0000921], the position [PATO:0000140] of the maximum [NCIT:C25564] width dimension relative to the length axis [NCIT:C25154], and the curvature [PATO:0001591] of the leaf margin [PO:0020128]. Shapes of a leaf or leaflet. |
comments |
This trait includes terms to describe the shape of leaves, regardless of if they are broad leaves, scale-like leaves, or needle-like leaves. For compound leaves, it is generally the shape of the leaflet that is recorded. See the trait leaf_type for broad terms referencing leaf form (broadleaf, needle, scale) and plant_photosynthetic_organ for terms indicating which plant organ or tissue functions as the plant’s primary photosynthetic organ (e.g. phyllode, cladode, article).
|
value type | categorical variable |
has narrower |
leaf_shape_linear A 2-dimensional shape that is very long and narrow, has parallel sides and a length:width ratio between 12:1 and 6:1. leaf_shape_narrowly_oblong A 2-dimensional shape that is long and narrow, has parallel sides and a length:width ratio between 6:1 and 3:1. (Synonyms, lorate) leaf_shape_oblong A 2-dimensional shape that is somewhat elongated with parallel sides and a length:width ratio between 2:1 and 3:2. leaf_shape_linear_elliptical A 2-dimensional shape that is a very narrow oval, with curved margins, lacking a distinct point, and a length:width ratio between 12:1 and 6:1. leaf_shape_narrowly_elliptical A 2-dimensional shape that is a narrow oval, with curved margins, lacking a distinct point, and a length:width ratio between 6:1 and 3:1. leaf_shape_elliptical A 2-dimensional shape that is an oval, with curved margins, lacking a distinct point, and a length:width ratio between 2:1 and 3:2. (Synonyms, oval) leaf_shape_widely_elliptical A 2-dimensional shape that is a broad oval, with curved margins, lacking a distinct point, and a length:width ratio of approximately 6:5. leaf_shape_orbicular A 2-dimensional shape that is approximately circular. (Synonyms, circular) leaf_shape_oblate A 2-dimensional shape that is a broad oval, with curved margins, lacking a distinct point, and a length:width ratio of approximately 5:6. The petiole attaches along the broader side. leaf_shape_narrowly_lanceolate A 2-dimensional shape that is very narrowly egg-shaped or teardrop-shaped, with a length:width ratio between 12:1 and 6:1. The petiole attaches near the wide, curved portion of the leaf lamina. leaf_shape_lanceolate A 2-dimensional shape that is narrowly egg-shaped or teardrop-shaped, with a length:width ratio between 6:1 and 3:1. The petiole attaches near the wide, curved portion of the leaf lamina. leaf_shape_narrowly_ovate A 2-dimensional shape that is narrowly egg-shaped, with a length:width ratio between 3:1 and 2:1. The petiole attaches near the wide, curved portion of the leaf lamina. (Synonyms, lance_ovate, widely_lanceolate) leaf_shape_ovate A 2-dimensional shape that is egg-shaped, with a length:width ratio between 2:1 and 3:2. The petiole attaches near the wide, curved portion of the leaf lamina. leaf_shape_widely_ovate A 2-dimensional shape that is broadly egg-shaped with a length:width ratio of approximately 6:5. The petiole attaches near the wide, curved portion of the leaf lamina. leaf_shape_narrowly_oblanceolate A 2-dimensional shape that is very narrowly teardrop-shaped, with a length:width ratio between 12:1 and 6:1. The leaf lamina has curved outer margins and narrows nearly to a point where it attaches to the petiole. (Synonyms, linear_oblanceolate) leaf_shape_oblanceolate A 2-dimensional shape that is narrowly teardrop-shaped, with a length:width ratio between 6:1 and 3:1. The leaf lamina has curved outer margins and narrows nearly to a point where it attaches to the petiole. leaf_shape_narrowly_obovate A 2-dimensional shape that is narrowly egg-shaped or teardrop-shaped with a length:width ratio between 3:1 and 2:1. The leaf lamina has curved outer margins and narrows nearly to a point where it attaches to the petiole. (Synonyms, oblance-obovate) leaf_shape_obovate A 2-dimensional shape that is egg-shaped with a length:width ratio between 2:1 and 3:2. The leaf lamina has curved outer margins and narrows nearly to a point where it attaches to the petiole. leaf_shape_widely_obovate A 2-dimensional shape that is broadly egg-shaped with a length:width ratio of approximately 6:5. The leaf lamina has curved outer margins and narrows nearly to a point where it attaches to the petiole. leaf_shape_narrowly_triangular A 2-dimensional shape that is narrowly triangular to wedge-shaped, with a length:width ratio 6:1 to 3:1 and the petiole attaching near the widest portion of the leaf. (Synonyms, triangular) leaf_shape_triangular A 2-dimensional shape that is triangular to wedge-shaped, with a length:width ratio 2:1 to 3:2 and the petiole attaching near the widest portion of the leaf. leaf_shape_deltate A 2-dimensional shape that is triangular to wedge-shaped, with a length:width ratio of 1:1 and the petiole attaching along one of the broad sides. leaf_shape_obtriangular A 2-dimensional shape that is triangular to fan-shaped or wedge-shaped, with a length:width ratio 2:1 to 3:2 and the petiole attaching near the narrowest portion of the leaf. (Synonyms, flabelliform, fan-shaped, wedge-shaped, cuneate) leaf_shape_narrowly_rhomboidal A 2-dimensional shape that is like a narrow diamond, with approximately straight edges, widest near the middle, and a length:width ratio 6:1 to 3:1. The petiole attaches near one of the points. leaf_shape_rhomboidal A 2-dimensional shape that is approximately diamond or parallelogram-shaped, with approximately straight edges, widest near the middle, and a length:width ratio 2:1 to 3:2. The petiole attaches near one of the points. (Synonyms, rhombic, diamond) leaf_shape_trullate A 2-dimensional shape that is approximately parallelogram-shaped, widest near where the petiole attaches (base), and with a length:width ratio 2:1 to 3:2. leaf_shape_narrowly_obtrullate A 2-dimensional shape that is narrowly parallelogram-shaped, widest near the tip, and with a length:width ratio 3:1 to 6:1. leaf_shape_obtrullate A 2-dimensional shape that is approximately parallelogram-shaped, widest near the tip, and with a length:width ratio 2:1 to 3:2. leaf_shape_widely_obtrullate A 2-dimensional shape that is broadly parallelogram-shaped, widest near the tip, and with a length:width ratio of approximately 6:5. leaf_shape_acicular A 2-dimensional or 3-dimensional shape with a needlelike tip, often round in cross-section, with margins straight and parallel, and a length:width ratio greater than 12:1. (Synonyms, needle-shaped) leaf_shape_terete A 3-dimensional shape that is a long, narrow cylinder approximately circular in cross-section. Terete leaves often taper toward the tip. (Synonym, cylindrical) leaf_shape_cordate A 2-dimensional heart shape, approximately ovate with a cordate base, with the petiole attaching at the notch between the lobes. (Synonyms, cordiform) leaf_shape_obcordate A 2-dimensional heart shape, approximately ovate with a cordate apex, and the petiole attaching along the broad, curve side. leaf_shape_falcate A 2-dimensional sickle-shape, approximately lanceolate to linear and curved on one side. (Synonyms, scimitar-shaped, sickle-shaped, falciform, crescent-shaped) leaf_shape_reniform A 2-dimensional shape that is roughly kidney-shaped, wider than long with a rounded apex and two rounded, basal lobes that are smoothly concave at their intersection. (Synonyms, kidney-shaped) leaf_shape_spathulate A 2-dimensional shape that can be approximately oblong, obovate, or oblanceolate in outline with a long attenuate base, like a spoon. (Synonyms, spoon-shaped, clavate) leaf_shape_strap-shaped A 2-dimensional shape that is strap-shaped with a rounded tip and a length:width ratio greater than 12:1. leaf_shape_ensiform A 2-dimensional shape that is sword-shaped with a pointed tip and a length:width ratio greater than 12:1. (Synonyms, sword-shaped) leaf_shape_subulate A 2-dimensional shape that is awl-shaped, approximately narrowly oblong to narrowly triangular with a broad base. (Synonyms, awl-shaped) leaf_shape_peltate A 2-dimensional orbicular shape, distinguished by the petiole attaching near the center of the leaf lamina. leaf_shape_filiform A 2-dimensional shape that is long, thin, and typically flexuous, threadlike, filamentous. |
has broader | leaf shape trait |
plant structure | leaf |
measured characteristic |
shape length curvature structure |
keyword |
leaf shape leaf margin |
scope note | Plants with leaves. |
has exact match | leaf shape |
has close match | |
has related match | leaflet shape |
examples |
close match: Leaf form [TOP225] (https://top-thesaurus.org/index) close match: Leaf shape [TRY:154] (https://www.try-db.org/de/de.php) |
references |
Simpson 2019 Ellis 2009 Systematics Association Committee for Descriptive Terminology 1962 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011311 |
Leaf base shape
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011312 |
alternative label | leaf_base_shape |
description |
A leaf shape trait [TO:0000492] which is the variation in shapes and forms of a leaf base [PO:0020040], especially considering the curvature [PATO:0001591] of the leaf margin [PO:0020128] near where it attaches to the petiole [PO:0020038]. The shape of the basal margin of a leaf. |
comments | |
value type | categorical variable |
has narrower |
leaf_base_shape_acute Two sides of the leaf meet at an angle that is less than 90<U+00B0>. leaf_base_shape_attenuate Basal leaf margin abruptly incurved (concave), the two sides intersecting at an angle of less than 45<U+00B0>. leaf_base_shape_auriculate Basal leaf margin with two rounded lobes. The leaf margin above the lobes is concave. The petiole attaches in the incised region between the lobes. leaf_base_shape_cordate Basal leaf margin with two rounded lobes and the petiole attaches in the incised region between the lobes. The leaf margin above the lobes is rounded. leaf_base_shape_cuneate Basal leaf margin approximately straight, the two sides intersecting at an angle between 45<U+00B0> to 90<U+00B0>. leaf_base_shape_hastate Basal leaf margin with two lobes oriented outward, such that they are at approximately 90<U+00B0> relative to the central axis and the leaf margin is fairly flat at the base. leaf_base_shape_oblique The leaf base is asymmetrical, with the midrib not lying in the middle of the leaf where it attaches to the petiole. leaf_base_shape_obtuse Two sides of the leaf meet at an angle that is greater than 90<U+00B0>. leaf_base_shape_rounded Basal leaf margin is rounded. leaf_base_shape_sagittate Basal leaf margin with two lobes oriented downward, away from apex. The petiole attaches in the concave region between the lobes. leaf_base_shape_sheathing The leaf base is broad and envelops the stem. leaf_base_shape_truncate The basal leaf margin is cut straight across with the two sides intersecting at approximately 180<U+00B0>. |
has broader | leaf shape trait |
plant structure | leaf |
measured characteristic |
shape curvature |
keyword |
leaf shape leaf base leaf margin petiole |
scope note | Plants with leaves. |
has exact match | Lamina shape |
has close match | |
has related match | |
examples | |
references |
Simpson 2019 Ellis 2009 |
date created | 31/10/2022 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011312 |
Leaf margin
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011313 |
alternative label | leaf_margin |
description |
A leaf shape trait [TO:0000492] which is the edge shape [PATO:0002267] of the leaf margin [PO:0020128], in particular the presence or absence of leaf lamina teeth [PO:0025518] and the shape [PATO:0000052] of the leaf lamina teeth (serrate, dentate, or crenate). Shape of the leaf margin, referencing incisions or projections in the outermost 1/8 of the leaf lamina. |
comments |
Terms describing leaf lamina projections and incisions that are greater than 1/8 of the distance to the midrib are captured under the traits leaf_lobation and leaf_division_detailed .
|
value type | categorical variable |
has narrower |
leaf_margin_entire Leaf margin lacks projections or indentations that extend less than 1/8 of the distance to the midrib. leaf_margin_toothed Leaf margin has small projections or lobes along the edge of the leaf lamina. This is a broad term that includes serrate, dentate, and crenulate. leaf_margin_toothed_serrate Type of toothed leaf margin with sharp teeth that are angled toward the tip of the leaf. (Synonyms, saw-toothed) leaf_margin_toothed_dentate Type of toothed leaf margin with sharp teeth that point outwards at right angles to the leaf margin. leaf_margin_toothed_crenate Type of toothed leaf margin with teeth that are rounded or obtuse, rather than having a sharp apex. [PO:0025519] |
has broader | leaf shape trait |
plant structure | leaf |
measured characteristic |
shape edge shape curvature |
keyword |
leaf shape leaf margin leaf lamina tooth |
scope note | Plants with broad leaves. |
has exact match | leaf margin morphology trait |
has close match | leaf margin serrated |
has related match | |
examples |
exact match: Leaf margin type [TRY:963] (https://www.try-db.org/de/de.php) exact match: Leaf_margin_1 [GIFT:4.12.1] (https://gift.uni-goettingen.de) |
references |
Simpson 2019 Ellis 2009 Hickey 1973 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011313 |
Leaf margin posture
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011314 |
alternative label | leaf_margin_posture |
description |
A leaf shape trait [TO:0000492] which is the degree of curvature [PATO:0001591] or curling [PATO:0000405] of the leaf margin [PO:0020128] along the side of the leaf, at the leaf apex [PO:0020137], and at the leaf base [PO:0020040]. The posture (curvature or curling) of the leaf margin. |
comments | This trait captures the posture of the leaf margin, where posture refers to the placement of different parts of the leaf’s margin relative to a flat plane. This trait’s definition and allowable levels will be further refined once more data are available to map onto possible trait values. |
value type | categorical variable |
has narrower |
leaf_margin_posture_involute Leaf margins along the side of the leaf are rolled upward, such that the margin of the adaxial (upper) leaf surface is rolled inward. (Synonym, inrolled, incurved) leaf_margin_posture_revolute Leaf margins along the side of the leaf are rolled under or downward, such that the margin of the abaxial (lower) leaf surface is rolled inward. [PATO:0001963] (Synonym, recurved) leaf_margin_posture_flat Leaf lamina, including margins, is a 2-dimensional plane. [PATO:0000407] leaf_margin_posture_undulate Leaf margins are wavy in their 2-dimensional plane. (Synonyms, wavy, rippled, sinuate) |
has broader | leaf shape trait |
plant structure | leaf |
measured characteristic |
shape curvature |
keyword |
leaf shape curled leaf margin leaf apex leaf base |
scope note | Plants with leaves |
has exact match | |
has close match | |
has related match | |
examples | |
references | Simpson 2019 |
date created | 31/10/2022 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011314 |
Leaf lobation
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011315 |
alternative label | leaf_lobation |
description |
A leaf shape trait [TO:0000492] which is the presence or absence of leaf lamina lobes [PO:0025517] along the leaf margin [PO:0020128] and how far the lobes extend toward the midrib [PO:0020139]. A trait that indicates whether a leaf lamina or leaflets display any divisions or dissections on a 2-dimensional plane that extend greater than 1/8 of the distance to the midrib. |
comments |
For terms pertaining to 2-dimensional leaf lamina divisions and incisions that are less than 1/8 of the distance to the midrib, see the trait leaf_margin . See also the trait leaf_division for more detailed leaf lobation (and leaf compoundness) trait values. Note that there might be some species that grade from deeply lobed simple leaves to compound leaves.
|
value type | categorical variable |
has narrower |
leaf_lobation_unlobed Leaf margin lacks projections or indentations that extend more than 1/8 of the distance to the midrib. leaf_lobation_lobed Leaf margin has incisions, either rounded or sharp-tipped, that extend more than 1/8 of the distance to the midrib. leaf_lobation_lobed_deep Leaf margin with lobes that extend more than halfway to the midrib. (Synonyms, parted, divided) leaf_lobation_lobed_shallow Leaf margin with lobes that extend less than halfway to the midrib. (Synonyms, cleft, sinuate) |
has broader | leaf shape trait |
plant structure | leaf |
measured characteristic |
shape edge shape curvature |
keyword |
leaf shape leaf lamina lobes leaf margin leaf midvein, midrib |
scope note | Plants with well-developed leaves. |
has exact match | leaf lamina lobes |
has close match | |
has related match | |
examples | |
references |
Simpson 2019 Ellis 2009 Hickey 1973 Wikipedia 2022 Glossary of leaf morphology |
date created | 31/10/2022 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011315 |
Leaf compoundness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011316 |
alternative label | leaf_compoundness |
description |
A leaf shape trait [TO:0000492] which is whether a leaf [PO:0025034] is a simple leaf [PO:0020042] or is divided into leaflets [PO:0020049] making it a compound leaf [PO:0020043]. A binary trait that indicates whether a leaf lamina is simple or divided into discontinuous leaflets (compound). |
comments |
See also the trait ‘leaf_division’ for more detailed leaf compoundness trait values. Note that there might be some species that grade from deeply lobed simple leaves (see trait leaf_lobation ) to compound leaves.
|
value type | categorical variable |
has narrower |
leaf_compoundness_simple A leaf with a single undivided blade. [PO:0020042] leaf_compoundness_compound A leaf that is divided into multiple leaflets. [PO:0020043] |
has broader | leaf shape trait |
plant structure | leaf |
measured characteristic |
shape spatial pattern, distribution |
keyword |
leaf shape simple leaf leaflet compound leaf leaf midvein, midrib |
scope note | Plants with well-developed leaves. |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Leaf compoundness [TOP222] (https://top-thesaurus.org/index) exact match: Leaf compoundness [TRY:17] (https://www.try-db.org/de/de.php) exact match: leaf compoundness [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Leaf division degree [BROT:2] (http://doi.org/10.1038/sdata.2018.135) |
references | Ellis 2009 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011316 |
Leaf divisions
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011317 |
alternative label | leaf_lamina_division |
description |
A leaf shape trait [TO:0000492] which indicates types [NCIT:C25284] of lobed leaves [PO:0025517] and compound leaves [PO:0020043], including the arrangement [NCIT:C61532] of the lobes or leaflets [PO:0020049] with respect to the midrib [PO:0020139] or other primary leaf veins [PO:0025413] and the number of orders of axes [NCIT:C25154] across which there are incisions or divisions. A trait that captures the types of lobed leaves and compound leaves, including the arrangement of the lobes or leaflets relative to the midrib or other primary veins and the number of orders of axes across which there are incisions or divisions. |
comments |
This trait provides detailed description of leaf divisions, beyond what is captured in leaf_compoundness (simple versus compound) and leaf_lobation (entire versus lobed). The term ‘divided’ is meant to indicate lobing, such as ‘trichotomously divided’, but as ‘divided’ is also used in some context to indicate the divisions of leaves into leaflets, it is avoided as a trait value for this trait.
|
value type | categorical variable |
has narrower |
leaf_lamina_division_pinnately_lobed Leaf with divisions that are symmetrical across a central axis, usually the midvein. leaf_lamina_division_palmately_lobed Leaf with divisions that radiate from a single point, usually the basal junction of major veins. leaf_lamina_division_pinnatifid Leaf with lobes that extend less than half-way to the midrib. leaf_lamina_division_bipinnatifid Leaf that is twice pinnatifid, with two series of lobes that extend less than half-way to the midrib. leaf_lamina_division_pinnatipartite Leaf with lobes that extend more than half-way to the midrib. leaf_lamina_division_pinnatisect Leaf with lobes that extend nearly to the midrib but the divisions are not separated into distinct leaflets. leaf_lamina_division_bipinnatipartite Leaf that is twice pinnatipartite, with two series of lobes that extend more than half-way to the midrib. leaf_lamina_division_bipinnatisect Leaf that is twice pinnatisect, with two series of lobes that extend nearly to the midrib but the divisions are not separated into distinct leaflets. leaf_lamina_division_trichotomously_lobed Leaf divided repeatedly into three lobes. leaf_lamina_division_dichotomously_lobed Leaf divided repeatedly into two lobes. leaf_lamina_division_bipartite Leaf divided into two lobes. leaf_lamina_division_tripartite Leaf divided into three lobes. leaf_lamina_division_pinnately_compound Leaf divided into leaflets that attach along a central axis. [PATO_0000410] leaf_lamina_division_palmately_compound Leaf divided into leaflets that attach to a central point. (Synonyms, digitate) leaf_lamina_division_bipinnate Leaf that is twice pinnate, having pinnate leaflets that are themselves pinnately divided. leaf_lamina_division_tripinnate Leaf that is three times pinnate, with pinnate leaflets that are twice more pinnately divided. leaf_lamina_division_trifoliate Leaf divided into three leaflets. (Synonyms, ternate, trifoliolate) |
has broader | leaf shape trait |
plant structure | leaf |
measured characteristic |
spatial pattern, distribution shape arrangement |
keyword |
leaf shape leaf lamina lobes compound leaf leaflet leaf midvein, midrib leaf margin pinnate |
scope note | Plants with broad leaves. |
has exact match | |
has close match | |
has related match | |
examples |
related match: Leaf compoundness [TOP222] (https://top-thesaurus.org/index) related match: Leaf compoundness [TRY:17] (https://www.try-db.org/de/de.php) |
references |
Simpson 2019 Ellis 2009 Hickey 1973 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | leaf_division |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011317 |
Leaf lamina posture (leaf 3-dimensionality)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011318 |
alternative label | leaf_posture_numeric |
description |
A leaf shape trait [TO:0000492] which is the maximum [NCIT:C25564] perpendicular [PATO:0002434] height [PATO:0000119] of a leaf [PO:0025034] placed on a flat surface, indicating the 3-D extent [PATO:0001710] of the leaf. This generally corresponds with whether the leaf is curled [FLOPO:0010468]. The maximum perpendicular height of a leaf when positioned on a flat surface. |
comments | A measure of how planar versus 3-dimensional a leaf is. The term posture refers to the placement of different parts of the leaf’s lamina relative to a flat plane. |
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 0 |
maxAllowedValue | 100 |
has broader | leaf shape trait |
plant structure | leaf |
measured characteristic |
height shape 3-D extent |
keyword |
leaf shape leaf lamina |
scope note | Plants with leaves |
has exact match | |
has close match | |
has related match | |
examples | |
references |
Simpson 2019 Grootemaat 2017 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | leaf_curliness |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011318 |
Leaf lamina posture (leaf 3-dimensional shape)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011319 |
alternative label | leaf_lamina_posture |
description |
A leaf shape trait [TO:0000492] which is the 3-D shape [PATO:0002266] of the surface [NCIT:C25245] of the leaf lamina [PO:0020039], including its degree of curvature [PATO:0001591] and whether it is bent [PATO:0000617]. The 3-dimension shape of the surface of the leaf lamina, including its degree of curvature and bending. |
comments | |
value type | categorical variable |
has narrower |
leaf_lamina_posture_concave A longitudinal posture term indicating the leaf lamina is curved upward along the central axis, such that the upper leaf lamina surface is concave. leaf_lamina_posture_conduplicate A longitudinal posture term indicating the leaf lamina is folded upward along the central axis. (Synonym, folded) leaf_lamina_posture_convex A longitudinal posture term indicating the leaf lamina is curved downward along the central axis, such that the lower leaf lamina surface is concave. (Synonym, concavoconvex, planoconvex) leaf_lamina_posture_convolute Leaf lamina is contorted. (Synonym, twisted) leaf_lamina_posture_flat The leaf lamina is a 2-dimensional plane. leaf_lamina_posture_incurved Leaf tip is curved upward. leaf_lamina_posture_involute A longitudinal posture term indicating the outer portions of the leaf lamina are rolled inward or upward. leaf_lamina_posture_plicate Leaf margin is pleated, with a series of longitudinal folds. leaf_lamina_posture_recurved Leaf tip is curved outward or downward. [PATO:0002211] leaf_lamina_posture_revolute A longitudinal posture term indicating the outer portions of the leaf lamina are rolled outward or downward. leaf_lamina_posture_undulate The leaf lamina surface is rippled or wavy in its 2-dimensional plane. [PATO:0000967] (Synonyms, wavy, rippled, sinuate) |
has broader | leaf shape trait |
plant structure | leaf |
measured characteristic |
shape 3-D shape 3-D extent |
keyword |
leaf shape leaf lamina |
scope note | Plants with leaves |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 07/06/2023 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011319 |
Leaf glaucousness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011360 |
alternative label | leaf_glaucousness |
description |
A leaf morphology trait [TO:0000748] which is the presence or absence of epicuticular wax [PO:0025388] on the leaf lamina [PO:0020039] of a fully expanded adult phase leaf [PO:0006340], giving the leaf lamina surface a white-coloured [PATO:0000014] or blue-coloured waxy [PATO:0002384] appearance, termed glaucous. Variable describing whether mature adult phase leaves have a glaucous appearance, the colour due to being covered with a smooth, usually whitish to bluish epicuticular wax that can easily be rubbed off. |
comments | The accompanying methods should specify if the trait was scored on the upper (adaxial) or lower (abaxial) surface of the leaf; in the absence of any notes, it is assumed the trait was scored on the upper (adaxial) leaf surface. |
value type | categorical variable |
has narrower |
leaf_glaucousness_glaucous Mature (fully expanded) leaves on adult plants have a waxy coating, giving them a glaucous appearance. (Synonyms, waxy bloom, pruinose) leaf_glaucousness_not_glaucous Mature (fully expanded) leaves on adult plants do not have a glaucous appearance. |
has broader | leaf morphology trait |
plant structure | leaf |
measured characteristic |
colour / color texture |
keyword |
epicuticular wax leaf lamina waxy |
scope note | Plants with leaves. |
has exact match | leaf gloss |
has close match | |
has related match | |
examples | |
references | Simpson 2019 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | glaucous |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011360 |
Mature leaf hairiness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011361 |
alternative label | leaf_hairs_adult_leaves |
description |
A leaf pubescence trait [TO:0002722] which is the presence or absence of trichomes [PO:0006504] (hairs) on the leaf lamina [PO:0020039] of a fully expanded adult phase leaf [PO:0006340]. Variable describing whether mature (fully expanded) adult phase leaves on adult plants have hairs (trichomes). |
comments | This trait captures the presence or absence of hairs on mature (fully expanded), adult phase leaves on adult plants. Best practice is to sample leaves that are recently fully expanded, since older leaves have often shed many of their hairs. The accompanying methods should specify if the trait was scored on the upper (adaxial) or lower (abaxial) surface of the leaf; in the absence of any notes, it is assumed the trait was scored on the upper (adaxial) leaf surface. |
value type | categorical variable |
has narrower |
leaf_hairs_adult_leaves_glabrous Mature (fully expanded) leaves on adult plants do not have hairs (trichomes). leaf_hairs_adult_leaves_hairy Mature (fully expanded) leaves on adult plants have hairs (trichomes). |
has broader | leaf morphology trait |
plant structure | leaf |
measured characteristic |
texture pilosity |
keyword |
leaf pubescence leaf trichome leaf lamina vestiture hairy adult vascular leaf pilosity trichome |
scope note | Plants with leaves. |
has exact match | leaf lamina pubescence |
has close match | |
has related match | leaf trichome density |
examples | close match: Leaf emergences (pubescence, pruinescence, hairs, spines, thorns) [TRY:677] (https://www.try-db.org/de/de.php) |
references |
Hanley 2007 Simpson 2019 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | leaf_hairs_adult |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011361 |
Juvenile phase leaf hairiness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011362 |
alternative label | leaf_hairs_juvenile_leaves |
description |
A leaf pubescence trait [TO:0002722] which is the presence or absence of trichomes [PO:0006504] (hairs) on the leaf lamina [PO:0020039] of a juvenile vascular leaf [PO:0006339] (on adult or juvenile plants). Variable describing whether fully expanded juvenile phase leaves (on adult or juvenile plants) have hairs (trichomes). |
comments | This trait captures the presence or absence of hairs on fully-expanded juvenile phase leaves. It is best practice for the methods to specify whether these leaves were sampled from adult or juvenile plants. The accompanying methods should also specify if the trait was scored on the upper (adaxial) or lower (abaxial) surface of the leaf; in the absence of any notes, it is assumed the trait was scored on the upper (adaxial) leaf surface. |
value type | categorical variable |
has narrower |
leaf_hairs_juvenile_leaves_glabrous Juvenile phase leaves do not have hairs (trichomes). leaf_hairs_juvenile_leaves_hairy Juvenile phase leaves have hairs (trichomes). |
has broader | leaf morphology trait |
plant structure | leaf |
measured characteristic |
texture pilosity |
keyword |
leaf pubescence leaf trichome leaf lamina vestiture hairy juvenile vascular leaf pilosity trichome |
scope note | Plants with leaves. |
has exact match | |
has close match | leaf lamina pubescence |
has related match | leaf trichome density |
examples | close match: Leaf emergences (pubescence, pruinescence, hairs, spines, thorns) [TRY:677] (https://www.try-db.org/de/de.php) |
references |
Hanley 2007 Simpson 2019 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | leaf_hairs_juvenile |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011362 |
Immature leaf hairiness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011363 |
alternative label | leaf_hairs_immature_leaves |
description |
A leaf pubescence trait [TO:0002722] which is the presence or absence of trichomes [PO:0006504] (hairs) on the leaf lamina [PO:0020039] of an adult phase leaf [PO:0006340] still in the vascular leaf expansion stage [PO:0001052]. Variable describing whether immature (still expanding) adult phase leaves on adult plants have hairs (trichomes). |
comments | This trait captures the presence or absence of hairs on immature (still expanding) leaves on adult plants. The accompanying methods should specify if the trait was scored on the upper (adaxial) or lower (abaxial) surface of the leaf; in the absence of any notes, it is assumed the trait was scored on the upper (adaxial) leaf surface. |
value type | categorical variable |
has narrower |
leaf_hairs_immature_leaves_glabrous Immature (still expanding) leaves do not have hairs (trichomes). leaf_hairs_immature_leaves_hairy Immature (still expanding) leaves have hairs (trichomes). |
has broader | leaf morphology trait |
plant structure | leaf |
measured characteristic |
texture pilosity |
keyword |
leaf pubescence leaf trichome leaf lamina vestiture hairy adult vascular leaf vascular leaf expansion stage trichome |
scope note | Plants with leaves. |
has exact match | |
has close match | leaf lamina pubescence |
has related match | leaf trichome density |
examples | close match: Leaf emergences (pubescence, pruinescence, hairs, spines, thorns) [TRY:677] (https://www.try-db.org/de/de.php) |
references |
Hanley 2007 Simpson 2019 |
date created | 31/10/2022 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011363 |
Leaf surface colour
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011364 |
alternative label | leaf_surface_colour |
description |
A leaf morphology trait [TO:0000748] which is which is the dominant (primary [NCIT:C25251]) colour [PATO:0000014] of the leaf lamina [PO:0020039]. Human visible dominant colour of the surface of a leaf. |
comments | |
value type | categorical variable |
has narrower |
leaf_surface_colour_green Leaf lamina surface is green. leaf_surface_colour_grey_green Leaf lamina surface is grey-green. leaf_surface_colour_dark_green Leaf lamina surface is dark green. leaf_surface_colour_pale_green Leaf lamina surface is pale green. leaf_surface_colour_pale_grey_green Leaf lamina surface is pale grey-green. leaf_surface_colour_dark_grey_green Leaf lamina surface is dark grey-green. leaf_surface_colour_red Leaf lamina surface is red. leaf_surface_colour_purple Leaf lamina surface is purple. |
has broader | leaf morphology trait |
plant structure | leaf |
measured characteristic | colour / color |
keyword |
leaf lamina adult vascular leaf |
scope note | |
has exact match | leaf lamina color |
has close match | |
has related match | |
examples | exact match: Leaf color [TRY:582] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011364 |
Leaf surface reflectivity
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011365 |
alternative label | leaf_surface_reflectivity |
description |
A leaf morphology trait [TO:0000748] which is the reflectivity [PATO:0001297] of the surface [NCIT:C25245] of a mature [PATO:0001701] leaf lamina [PO:0020039]. Surface reflectivity of a leaf, indicating whether the leaf lamina is shiny or dull. |
comments |
There will be overlap between this trait and the trait leaf_glaucousness . This trait can be used to document surface reflectivity more broadly, not only distinguishing between leaf lamina that are glaucous versus not glaucous.
|
value type | categorical variable |
has narrower |
leaf_surface_reflectivity_dull Leaf surface appears dull, indicating it has a low reflectivity. leaf_surface_reflectivity_shiny Leaf surface appears shiny or glossy, indicating it has a high reflectivity. (Synonyms, glossy, lustrous, polished) |
has broader | leaf morphology trait |
plant structure | leaf |
measured characteristic |
texture morphology reflectivity |
keyword |
leaf lamina adult vascular leaf |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011365 |
Leaf phyllotaxis
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011410 |
alternative label | leaf_phyllotaxis |
description |
A leaf [PO:0025034] spatial pattern [PATO:0000060] trait which is the phyllotaxy [TO:0006014] of leaves, indicating a leaf’s position [TO:0000541] relative to other leaves at a stem node [PO:0020141]. Leaf arrangement at a stem node, indicating the relative number and position of leaves at a single stem note. |
comments |
This trait only includes true phyllotaxis, the arrangement of leaves at a single node, while the trait leaf arrangement indicates how the leaves are presented along the entire shoot system. See the trait stem_growth_habit for whole-plant leaf pattern terms, such as rosette .
|
value type | categorical variable |
has narrower |
leaf_phyllotaxis_alternate A single leaf is attached at each stem node. leaf_phyllotaxis_opposite A pair of leaves are attached opposite to one another at each stem node. leaf_phyllotaxis_whorled Three or more leaves are attached at each stem node, arranged in a symmetrical pattern around the stem. (Synonyms, verticillate) |
has broader | leaf position trait |
plant structure | leaf |
measured characteristic |
spatial pattern, distribution arrangement |
keyword |
phyllotaxy stem node |
scope note | Plants with leaves. |
has exact match | phyllotaxy |
has close match | |
has related match | |
examples |
close match: Leaf distribution along the shoot axis (arrangement type) [TRY:16] (https://www.try-db.org/de/de.php) close match: Leaf_arrangement [GIFT:4.15.1] (https://gift.uni-goettingen.de) |
references |
Simpson 2019 Ellis 2009 Wikipedia 2022 Leaf arrangement on the stem |
date created | 31/10/2022 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011410 |
Leaf arrangement
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011411 |
alternative label | leaf_arrangement |
description |
A leaf [PO:0025034] spatial pattern [PATO:0000060] trait which is the position [TO:0000541] and arrangement [NCIT:C61532] of leaves between stem nodes [PO:0020141], indicating how leaves align and cluster along the vegetative shoot system [PO:0025607]. Leaf arrangement across stem nodes, indicating the 3-dimensional arrangement of leaves along the length of the stem. |
comments |
Leaf arrangement, as defined for this trait, indicates patterns of leaf arrangement across nodes, including both formal terms (decussate, distichous, spiral) as well as indications of leaf clustering due to variation in internode length. See the trait leaf phyllotaxis for terms describing leaf arrangement at a single node. See the trait stem_growth_habit for whole-plant leaf pattern terms, such as rosette .
|
value type | categorical variable |
has narrower |
leaf_arrangement_decussate When sequential pairs of opposite leaves attach at right angles to the pair above or below. leaf_arrangement_distichous When alternate or opposite leaves are arranged in two opposite rows. leaf_arrangement_scattered When leaves are attached along the entire length of stem. leaf_arrangement_spiral When alternate leaves are attached in a progressive spiral pattern along the stem. leaf_arrangement_fasciculate A tight bundle or cluster of leaves attaches to the stem in a single location, generally due to the shortening of internodes. (Synonym, tufted) leaf_arrangement_clustered When leaves are in any type of cluster, where the type of cluster is not further specified. The leaves may be clustered toward the base of the plant (a rosette), toward the top of the plant, toward the end of branches, or in distinct tuft (fascicles), but more information is not provided. leaf_arrangement_clustered_basal When leaves are clustered or crowded to the base of the stem, arranged in a rosette or other basal clustering. (Synonym, rosette) leaf_arrangement_crowded When internode length varies considerably along a stem, such that leaves appear crowded or tufted. (Synonym, congested) leaf_arrangement_rosette When leaves radiate from a central point at or near ground level. leaf_arrangement_imbricate When leaves lay tightly against the stem and are overlapping. |
has broader | leaf position trait |
plant structure | leaf |
measured characteristic |
spatial pattern, distribution arrangement |
keyword |
stem node vegetative shoot system phyllotaxy |
scope note | Plants with leaves. |
has exact match | |
has close match | |
has related match | |
examples |
close match: Leaf distribution along the shoot axis (arrangement type) [TRY:16] (https://www.try-db.org/de/de.php) close match: Leaf_arrangement [GIFT:4.15.1] (https://gift.uni-goettingen.de) |
references |
Simpson 2019 Ellis 2009 Wikipedia 2022 Leaf arrangement on the stem |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011411 |
Leaf axil angle
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011412 |
alternative label | leaf_axil_angle |
description |
A leaf position trait [TO:0000541] which is the angle [PATO:0002326] of a leaf axil [PO:0009023], the space between a leaf [PO:0025034] and the stem [PO:0009047] to which it is attached. The angle between a shoot and a leaf that connects to the shoot axis. |
comments |
This trait records the angle between the upper surface of a leaf and the stem to which it is attached. The slope of the leaf lamina relative to the solar zenith is a separate trait, leaf_inclination_angle .
|
value type | continuous variable |
unit |
deg plane angle degree |
minAllowedValue | 0 |
maxAllowedValue | 180 |
has broader | leaf position trait |
plant structure | leaf |
measured characteristic |
angle orientation spatial pattern, distribution |
keyword |
leaf axil leaf attitude leaf lamina leaf angle |
scope note | Plants with leaves |
has exact match | leaf angle |
has close match | |
has related match | |
examples | related match: Leaf angle (inclination, orientation) [TRY:3] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 31/10/2022 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011412 |
Leaf inclination angle
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011413 |
alternative label | leaf_inclination_angle |
description |
A leaf position trait [TO:0000541] which is the inclination angle [PATO:0002326] of the adaxial [PATO:0002047] leaf lamina [PO:0020039] surface relative to a horizontal [PATO:0001855] plane, such that an adaxial leaf surface facing the solar zenith [ECSO:00002723] has an angle of 0. The inclination angle of the upper (adaxial) leaf lamina surface relative to a horizontal plane, such that a leaf surface facing the solar zenith has an angle of 0. |
comments |
This trait records the slope of the leaf lamina relative to the ground surface. The angle between a stem and the leaf lamina is a separate trait, leaf_axil_angle . Complanate leaves can be scored as having a leaf_inclination_angle of 0.
|
value type | continuous variable |
unit |
deg plane angle degree |
minAllowedValue | -90 |
maxAllowedValue | 90 |
has broader | leaf position trait |
plant structure | leaf |
measured characteristic |
angle orientation spatial pattern, distribution |
keyword |
leaf lamina solar zenith angle leaf attitude |
scope note | Plants with leaves |
has exact match | |
has close match | leaf attitude |
has related match | |
examples | exact match: Leaf angle (inclination, orientation) [TRY:3] (https://www.try-db.org/de/de.php) |
references |
Niinemets 2010 Falster 2003b |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | leaf_angle |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011413 |
Leaf pendulousness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011414 |
alternative label | leaf_pendulousness |
description |
A leaf position trait [TO:0000541] which indicates whether leaves [PO:0025034] are pendulous [APD:glossary/40066], hanging loosely downward and possessing the ability to flutter. Binary variable describing whether leaves are pendulous, hanging loosely downward and possessing the ability to flutter. |
comments |
This is a binary categorical trait, scoring whether leaves are pendulous and therefore hanging loosely downward and able to flutter. Two additional traits, leaf_inclination_angle and leaf_axil_angle document the actual angle of the leaf lamina relative to, respectively, the solar zenith and the stem.
|
value type | categorical variable |
has narrower |
leaf_pendulousness_pendulous Leaves are pendulous. leaf_pendulousness_not_pendulous Leaves are not pendulous. |
has broader | leaf position trait |
plant structure | leaf |
measured characteristic |
spatial pattern, distribution orientation angle |
keyword |
leaf angle pendulous |
scope note | Plants with leaves |
has exact match | |
has close match | leaf attitude |
has related match | |
examples | close match: Leaf angle (inclination, orientation) [TRY:3] (https://www.try-db.org/de/de.php) |
references | Curtis 2012 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | pendulous_leaves |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011414 |
Cuticle thickness on the lower leaf surface
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011510 |
alternative label | leaf_cuticle_thickness_abaxial |
description |
A portion of plant tissue morphology trait [TO:0000843] which is the thickness [PATO:0000915] of cuticle [PO:0000022] on the abaxial [PATO:0002046] (lower) leaf lamina [PO:0020039]. Thickness of the cuticle on the lower leaf surface. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | portion of plant tissue morphology trait |
plant structure | leaf |
measured characteristic | thickness |
keyword |
plant cuticle abaxial leaf lamina |
scope note | |
has exact match | |
has close match | plant cuticle thickness |
has related match | |
examples | close match: Leaf cuticula thickness [TRY:716] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | lower_cuticle_thickness |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011510 |
Cuticle thickness on the upper leaf surface
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011511 |
alternative label | leaf_cuticle_thickness_adaxial |
description |
A portion of plant tissue morphology trait [TO:0000843] which is the thickness [PATO:0000915] of cuticle [PO:0000022] on the adaxial [PATO:0002047] (upper) leaf lamina [PO:0020039]. Thickness of the cuticle on the upper leaf surface. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | portion of plant tissue morphology trait |
plant structure | leaf |
measured characteristic | thickness |
keyword |
plant cuticle adaxial leaf lamina |
scope note | |
has exact match | |
has close match | plant cuticle thickness |
has related match | |
examples | close match: Leaf cuticula thickness [TRY:716] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | upper_cuticle_thickness |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011511 |
Leaf epidermis thickness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011512 |
alternative label | leaf_epidermis_thickness |
description |
A portion of plant tissue morphology trait [TO:0000843] which is the thickness [PATO:0000915] of epidermis [PO:0005679] tissue [CARO:0000043] , in samples where the leaf lamina [PO:0020039] side (abaxial [PATO:0002046] versus adaxial [PATO:0002047]) is not specified. Thickness of the epidermis, where the leaf lamina side is not specified. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 1 |
maxAllowedValue | 100 |
has broader | portion of plant tissue morphology trait |
plant structure | leaf |
measured characteristic | thickness |
keyword |
tissue epidermis leaf lamina abaxial adaxial |
scope note | |
has exact match | |
has close match | epidermis thickness |
has related match | |
examples | exact match: Leaf epidermis thickness [TRY:101] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | epidermis_thickness |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011512 |
Lower leaf side epidermis thickness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011513 |
alternative label | leaf_epidermis_thickness_abaxial |
description |
A portion of plant tissue morphology trait [TO:0000843] which is the thickness [PATO:0000915] of epidermis [PO:0005679] tissue [CARO:0000043] on the abaxial [PATO:0002046] (lower) side of the leaf lamina [PO:0020039]. Thickness of the epidermis on the lower side of the leaf. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 1 |
maxAllowedValue | 100 |
has broader | portion of plant tissue morphology trait |
plant structure | leaf |
measured characteristic | thickness |
keyword |
tissue epidermis abaxial leaf lamina |
scope note | |
has exact match | |
has close match | epidermis thickness |
has related match | |
examples | close match: Leaf epidermis thickness [TRY:101] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | epidermis_thickness_lower_leaf_surface |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011513 |
Upper leaf side epidermis thickness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011514 |
alternative label | leaf_epidermis_thickness_adaxial |
description |
A portion of plant tissue morphology trait [TO:0000843] which is the thickness [PATO:0000915] of epidermis [PO:0005679] tissue [CARO:0000043] on the adaxial [PATO:0002047] (upper) side of the leaf lamina [PO:0020039]. Thickness of the epidermis on the upper side of the leaf. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 1 |
maxAllowedValue | 100 |
has broader | portion of plant tissue morphology trait |
plant structure | leaf |
measured characteristic | thickness |
keyword |
tissue epidermis adaxial leaf lamina |
scope note | |
has exact match | |
has close match | epidermis thickness |
has related match | |
examples | close match: Leaf epidermis thickness [TRY:101] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | epidermis_thickness_upper_leaf_surface |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011514 |
Average leaf epidermal cell density
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011515 |
alternative label | leaf_epidermal_cell_density_both_sides |
description |
A plant cell morphology trait [TO:0002683] which is the ratio [PATO:0001470] of the count [NCIT:C25463] of epidermal cells [PO:0004013] to leaf lamina [PO:0020039] area [PATO_0001323], averaged across the abaxial [PATO:0002046] (lower) and adaxial [PATO:0002047] (upper) sides of the leaf lamina. Epidermal cell density averaged across the upper and lower sides of the leaf. |
comments | |
value type | continuous variable |
unit |
{count}/mm2 reciprocal square millimetre |
minAllowedValue | 100 |
maxAllowedValue | 10000 |
has broader |
plant cell morphology trait leaf morphology trait |
plant structure | leaf |
measured characteristic |
has number of count density ratio; proportion count per unit area |
keyword |
cell epidermal cell abaxial adaxial leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | epidermal_cell_density_both_sides |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011515 |
Lower leaf side epidermal cell density
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011516 |
alternative label | leaf_epidermal_cell_density_abaxial |
description |
A plant cell morphology trait [TO:0002683] which is the ratio [PATO:0001470] of the count [NCIT:C25463] of epidermal cells [PO:0004013] on the abaxial [PATO:0002046] (lower) side of the leaf lamina [PO:0020039] to leaf lamina area [PATO_0001323]. Epidermal cell density on the lower side of the leaf. |
comments | |
value type | continuous variable |
unit |
{count}/mm2 reciprocal square millimetre |
minAllowedValue | 100 |
maxAllowedValue | 10000 |
has broader |
plant cell morphology trait leaf morphology trait |
plant structure | leaf |
measured characteristic |
has number of count density ratio; proportion count per unit area |
keyword |
cell epidermal cell abaxial leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | epidermal_cell_density_abaxial |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011516 |
Upper leaf side epidermal cell density
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011517 |
alternative label | leaf_epidermal_cell_density_adaxial |
description |
A plant cell morphology trait [TO:0002683] which is the ratio [PATO:0001470] of the count [NCIT:C25463] of epidermal cells [PO:0004013] on the adaxial [PATO:0002047] (upper) side of the leaf lamina [PO:0020039] to leaf lamina area [PATO_0001323]. Epidermal cell density on the upper side of the leaf. |
comments | |
value type | continuous variable |
unit |
{count}/mm2 reciprocal square millimetre |
minAllowedValue | 100 |
maxAllowedValue | 10000 |
has broader |
plant cell morphology trait leaf morphology trait |
plant structure | leaf |
measured characteristic |
has number of count density ratio; proportion count per unit area |
keyword |
cell epidermal cell adaxial leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | epidermal_cell_density_adaxial |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011517 |
Lower leaf side hypodermis thickness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011518 |
alternative label | leaf_hypodermis_thickness_abaxial |
description |
A portion of plant tissue morphology trait [TO:0000843] which is the thickness [PATO:0000915] of hypodermis [PO:0005051] tissue [CARO:0000043] on the abaxial [PATO:0002046] (lower) side of the leaf lamina [PO:0020039]. Thickness of the hypodermis on the lower side of the leaf. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 1 |
maxAllowedValue | 100 |
has broader | portion of plant tissue morphology trait |
plant structure | leaf |
measured characteristic | thickness |
keyword |
tissue hypodermis abaxial leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Leaf hypodermis thickness [TRY:806] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | lower_hypodermis_thickness |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011518 |
Upper leaf side hypodermis thickness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011519 |
alternative label | leaf_hypodermis_thickness_adaxial |
description |
A portion of plant tissue morphology trait [TO:0000843] which is the thickness [PATO:0000915] of hypodermis [PO:0005051] tissue [CARO:0000043] on the adaxial [PATO:0002047] (upper) side of the leaf lamina [PO:0020039]. Thickness of the hypodermis on the upper side of the leaf. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 1 |
maxAllowedValue | 100 |
has broader | portion of plant tissue morphology trait |
plant structure | leaf |
measured characteristic | thickness |
keyword |
tissue hypodermis adaxial leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Leaf hypodermis thickness [TRY:806] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | upper_hypodermis_thickness |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011519 |
Lower palisade mesophyll thickness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011520 |
alternative label | leaf_palisade_tissue_thickness_abaxial |
description |
A portion of plant tissue morphology trait [TO:0000843] which is the thickness [PATO:0000915] of palisade mesophyll [PO:0005648] tissue [CARO:0000043] on the abaxial [PATO:0002046] (lower) side of the leaf lamina [PO:0020039]. Thickness of palisade mesophyll tissue on the lower side of the leaf. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 10 |
maxAllowedValue | 1000 |
has broader | portion of plant tissue morphology trait |
plant structure | leaf |
measured characteristic | thickness |
keyword |
tissue palisade mesophyll abaxial leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | lower_palisade_cell_thickness |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011520 |
Upper palisade mesophyll thickness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011521 |
alternative label | leaf_palisade_tissue_thickness_adaxial |
description |
A portion of plant tissue morphology trait [TO:0000843] which is the thickness [PATO:0000915] of palisade mesophyll [PO:0005648] tissue [CARO:0000043] on the adaxial [PATO:0002047] (upper) side of the leaf lamina [PO:0020039]. Thickness of palisade mesophyll tissue on the upper side of the leaf. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 10 |
maxAllowedValue | 1000 |
has broader | portion of plant tissue morphology trait |
plant structure | leaf |
measured characteristic | thickness |
keyword |
tissue palisade mesophyll adaxial leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | upper_palisade_cell_thickness |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011521 |
Palisade cell length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011522 |
alternative label | leaf_palisade_cell_length |
description |
A plant cell morphology trait [TO:0002683] which is the length [PATO:0000122] of individual palisade mesophyll cells [PO:0006206]. Length of individual leaf palisade cells. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 10 |
maxAllowedValue | 1000 |
has broader |
plant cell morphology trait leaf morphology trait |
plant structure | leaf |
measured characteristic | length |
keyword |
cell palisade mesophyll cell leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | plant cell length |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | palisade_cell_length |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011522 |
Palisade cell width
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011523 |
alternative label | leaf_palisade_cell_width |
description |
A plant cell morphology trait [TO:0002683] which is the width [PATO:0000921] of individual palisade mesophyll cells [PO:0006206]. Width of individual leaf palisade cells. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 1 |
maxAllowedValue | 50 |
has broader |
plant cell morphology trait leaf morphology trait |
plant structure | leaf |
measured characteristic | width |
keyword |
cell palisade mesophyll cell leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | palisade_cell_width |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011523 |
Number of layers of palisade cells
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011524 |
alternative label | leaf_palisade_layer_number |
description |
A portion of plant tissue morphology trait [TO:0000843] which is the count [NCIT:C25463] of cell layers [UBERON:0000119] of palisade mesophyll cells [PO:0006206]. The number of layers of palisade cells in a leaf. |
comments | |
value type | continuous variable |
unit | {count} |
minAllowedValue | 1 |
maxAllowedValue | 10 |
has broader |
portion of plant tissue morphology trait leaf morphology trait |
plant structure | leaf |
measured characteristic |
has number of count |
keyword |
cell palisade mesophyll cell palisade mesophyll leaf lamina tissue |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | palisade_layer_number |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011524 |
Spongy mesophyll cell thickness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011525 |
alternative label | leaf_spongy_mesophyll_thickness |
description |
A portion of plant tissue morphology trait [TO:0000843] which is the thickness [PATO:0000915] of spongy mesophyll [PO:0005647] tissue [CARO:0000043] within the leaf lamina [PO:0020039]. Thickness of spongy mesophyll tissue in a leaf. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 10 |
maxAllowedValue | 1000 |
has broader |
portion of plant tissue morphology trait leaf morphology trait |
plant structure | leaf |
measured characteristic | thickness |
keyword |
tissue spongy mesophyll leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf mesophyll spongiophyll thickness [TRY:805] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | spongy_mesophyll_thickness |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011525 |
Cell cross-sectional area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011526 |
alternative label | cell_cross-sectional_area |
description |
A plant cell size [TO:0002684] trait which is the cross-sectional [NCIT:C63795] area [PATO:0001323] of a cell [CL:0000000]. Cell cross-sectional area. |
comments |
This trait can be used to map the area of cell types that are not already explicitly listed as their own trait. The cell type and tissue/organ being measured needs to be specified under measurement_remarks or as a method_context .
|
value type | continuous variable |
unit |
um2 square micrometre |
minAllowedValue | 100 |
maxAllowedValue | 10000 |
has broader | plant cell morphology trait |
plant structure | whole plant |
measured characteristic |
area 2-D extent size |
keyword |
cell plant cell size cross section |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
close match: Leaf epidermis cell area [TRY:338] (https://www.try-db.org/de/de.php) close match: Leaf mesophyll cell area [TRY:573] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011526 |
Stomatal density on the lower leaf surface
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011610 |
alternative label | leaf_stomatal_density_abaxial |
description |
A leaf stomatal complex frequency trait [TO:0000566] which is the ratio [PATO:0001470] of the count [NCIT:C25463] of stomata [PO:0008032] on the abaxial [PATO:0002046] (lower) leaf lamina [PO:0020039] to the leaf lamina area [PATO:0001323]. Density of stomata on the lower leaf surface. |
comments | |
value type | continuous variable |
unit |
{count}/mm2 reciprocal square millimetre |
minAllowedValue | 1 |
maxAllowedValue | 1000 |
has broader | leaf stomatal complex morphology trait |
plant structure | leaf |
measured characteristic |
has number of count density ratio; proportion count per unit area |
keyword |
leaf stomatal complex frequency stomata; stomatal pore abaxial leaf lamina |
scope note | |
has exact match | abaxial stomatal frequency |
has close match | Stomatal density |
has related match | |
examples |
exact match: Stomata density abaxial [TOP371] (https://top-thesaurus.org/index) close match: Stomata density [TRY:63] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | stomatal_density_abaxial |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011610 |
Stomatal density on the upper leaf surface
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011611 |
alternative label | leaf_stomatal_density_adaxial |
description |
A leaf stomatal complex frequency trait [TO:0000566] which is the ratio [PATO:0001470] of the count [NCIT:C25463] of stomata [PO:0008032] on the adaxial [PATO:0002047] (upper) leaf lamina [PO:0020039] to the leaf lamina area [PATO:0001323]. Density of stomata on the upper leaf surface. |
comments | |
value type | continuous variable |
unit |
{count}/mm2 reciprocal square millimetre |
minAllowedValue | 0 |
maxAllowedValue | 1000 |
has broader | leaf stomatal complex morphology trait |
plant structure | leaf |
measured characteristic |
has number of count density ratio; proportion count per unit area |
keyword |
leaf stomatal complex frequency stomata; stomatal pore adaxial leaf lamina |
scope note | |
has exact match | adaxial stomatal frequency |
has close match | Stomatal density |
has related match | |
examples |
exact match: Stomata density adaxial [TOP372] (https://top-thesaurus.org/index) close match: Stomata density [TRY:63] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | stomatal_density_adaxial |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011611 |
Stomatal density averaged across both leaf surfaces
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011612 |
alternative label | leaf_stomatal_density_average |
description |
A leaf stomatal complex frequency trait [TO:0000566] which is the ratio [PATO:0001470] of the count [NCIT:C25463] of stomata [PO:0008032] to leaf lamina [PO:0020039] area [PATO:0001323], averaged the across the abaxial [PATO:0002046] and adaxial [PATO:0002047] sides of the leaf lamina. Density of stomata averaged across both leaf surfaces. |
comments | |
value type | continuous variable |
unit |
{count}/mm2 reciprocal square millimetre |
minAllowedValue | 0 |
maxAllowedValue | 1000 |
has broader | leaf stomatal complex morphology trait |
plant structure | leaf |
measured characteristic |
has number of count density ratio; proportion count per unit area |
keyword |
leaf stomatal complex frequency stomata; stomatal pore abaxial adaxial leaf lamina |
scope note | |
has exact match | Stomatal density |
has close match | |
has related match | |
examples |
exact match: Stomata density trait [TOP370] (https://top-thesaurus.org/index) exact match: Stomata density [TRY:63] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | stomatal_density_average |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011612 |
Stomatal distribution
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011613 |
alternative label | leaf_stomatal_distribution |
description |
A leaf stomatal complex frequency trait [TO:0000566] which indicates whether stomata [PO:0008032] occur on the abaxial [PATO:0002046] and/or adaxial [PATO:0002047] leaf lamina [PO:0020039]. Distribution of stomatal across the two leaf surfaces. |
comments | |
value type | categorical variable |
has narrower |
leaf_stomatal_distribution_amphistomatic Leaves with stomata on both leaf surfaces. leaf_stomatal_distribution_amphistomatic_uneven Leaves with stomata on both leaf surfaces but more stomata on the lower leaf surface. leaf_stomatal_distribution_epistomatic Leaves that only have stomata on the upper (adaxial) leaf surface. leaf_stomatal_distribution_hypostomatic Leaves that only have stomata on the lower (abaxial) leaf surface. |
has broader | leaf stomatal complex morphology trait |
plant structure | leaf |
measured characteristic | spatial pattern, distribution |
keyword |
leaf stomatal complex frequency stomata; stomatal pore abaxial adaxial leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Stomata distribution to ab- and adaxial leaf surfaces [TRY:781] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | stomatal_distribution |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011613 |
Stomatal hairiness
Guard cell length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011615 |
alternative label | leaf_guard_cell_length |
description |
A leaf stomatal complex frequency trait [TO:0000566] which indicates the length [PATO:0000122] of a guard cell [PO:0000293]. Length of guard cells. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 10 |
maxAllowedValue | 200 |
has broader | leaf stomatal complex morphology trait |
plant structure | leaf |
measured characteristic | length |
keyword |
cell leaf stomatal complex frequency guard cell stomata; stomatal pore |
scope note | |
has exact match | |
has close match | |
has related match | plant cell length |
examples | exact match: Stomata guard cell size [TRY:733] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | guard_cell_length |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011615 |
Leaf visible light transmission
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011710 |
alternative label | leaf_transmission |
description |
A leaf [PO:0025034] optical [NCIT:C16940] properties trait which is the proportion [PATO:0001470] of incoming visible light [NCIT:C17732] that is transmitted [SWEET:procWave/Transmission] through a leaf. Proportion of incoming visible light (between 400-700 nm) that is transmitted through a leaf. |
comments | |
value type | continuous variable |
unit |
umol/umol micromole per micromole |
minAllowedValue | 0.001 |
maxAllowedValue | 1 |
has broader | leaf optical properties trait |
plant structure | leaf |
measured characteristic |
dimensionless ratio ratio; proportion electromagnetic property radiation |
keyword |
optics visible light transmission photosynthetically active radiation |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf light transmittance [TRY:535] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011710 |
Leaf visible light absorption
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011711 |
alternative label | leaf_absorption |
description |
A leaf [PO:0025034] optical [NCIT:C16940] properties trait which is the proportion [PATO:0001470] of incoming visible light [NCIT:C17732] that is absorbed [SWEET:procWave/Absorption] by a leaf. Proportion of incoming visible light (between 400-700 nm) that is absorbed by a leaf. |
comments | |
value type | continuous variable |
unit |
umol/umol micromole per micromole |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader | leaf optical properties trait |
plant structure | leaf |
measured characteristic |
dimensionless ratio ratio; proportion electromagnetic property radiation |
keyword |
optics visible light absorption photosynthetically active radiation |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf light absorption (extinction) [TRY:10] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011711 |
Leaf visible light reflection
Leaf infra-red light reflection
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011713 |
alternative label | leaf_reflectance_near_infrared |
description |
A leaf [PO:0025034] optical [NCIT:C16940] properties trait which is the proportion [PATO:0001470] of incoming infrared radiation [ENVO:21001214] that is reflected [SWEET:procWave/Reflection] by a leaf. Proportion of incoming near infra-red light (between 750-10500 nm) that is reflected by a leaf. |
comments | |
value type | continuous variable |
unit |
umol/umol micromole per micromole |
minAllowedValue | 0.1 |
maxAllowedValue | 1 |
has broader | leaf optical properties trait |
plant structure | leaf |
measured characteristic |
dimensionless ratio ratio; proportion electromagnetic property radiation |
keyword |
infrared radiation optics reflection radiation |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011713 |
Stem cross-sectional area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011811 |
alternative label | stem_cross_sectional_area |
description |
A stem morphology trait [TO:0000361] which is the cross-sectional [NCIT:C63795] area [PATO:0001323] of a stem [PO:0009047] segment which includes the bark [PO:0004518]. Cross-sectional area of a stem, including both wood and bark. |
comments | This is not a trait itself, since it is dependent on the location sampled. However, values might be reported that are effectively contexts for another trait, such as bark thickness or Huber value. |
value type | continuous variable |
unit |
mm2 square millimetre |
minAllowedValue | 1 |
maxAllowedValue | 1000 |
has broader | stem morphology trait |
plant structure | stem |
measured characteristic |
area size |
keyword | cross section |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | stem_cross_section_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011811 |
Wood cross-sectional area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011812 |
alternative label | sapwood_cross_sectional_area |
description |
A stem morphology trait [TO:0000361] which is the cross-sectional [NCIT:C63795] area [PATO:0001323] of a stem [PO:0009047] segment from which the bark [PO:0004518] has been removed; this includes both sapwood [PO:0004513] and, if present heartwood [PO:0004512]. Cross-sectional area of a stem without bark. |
comments | This is not a trait itself, since it is dependent on the location sampled. However, values might be reported that are effectively contexts for another trait, such as bark thickness or Huber value. Although it is defined as the diameter of the entire stem without bark, it is generally measured on narrow branches that have not yet developed heartwood and therefore is the cross-section of sapwood. |
value type | continuous variable |
unit |
mm2 square millimetre |
minAllowedValue | 1 |
maxAllowedValue | 1000 |
has broader | stem morphology trait |
plant structure | stem |
measured characteristic |
area size |
keyword |
sapwood cross section wood, secondary xylem |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | stem_cross_sectional_area_no_bark |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011812 |
Terminal twig cross-sectional area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011813 |
alternative label | branch_terminal_twig_cross_sectional_area |
description |
A stem morphology trait [TO:0000361] which is the cross-sectional [NCIT:C63795] area [PATO:0001323] of the most distal [PATO:0001234] branch [PO:0025073]. Cross-sectional area of the terminal twig, measured just beyond the final branching node. |
comments | |
value type | continuous variable |
unit |
mm2 square millimetre |
minAllowedValue | 0.05 |
maxAllowedValue | 50 |
has broader | stem morphology trait |
plant structure | stem |
measured characteristic |
area size |
keyword |
branch cross section |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | twig_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011813 |
Terminal twig length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011814 |
alternative label | branch_terminal_twig_length |
description |
A stem morphology trait [TO:0000361] which is the length [PATO:0000122] of the most distal [PATO:0001234] branch [PO:0025073]. Length of the terminal twig, the length of stem beyond the final branching node. |
comments | |
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 1 |
maxAllowedValue | 1000 |
has broader | stem morphology trait |
plant structure | stem |
measured characteristic | length |
keyword | branch |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Twig length [TRY:1202] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | twig_length |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011814 |
Wood density
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011815 |
alternative label | wood_density |
description |
A stem morphology trait [TO:0000361] which is the ratio [PATO:0001470] of the mass [PATO:0000125] of a unit of wood [NCIT:C93062] from a stem [PO:0009047] assessed after drying to its volume [PATO:0000918] assessed without drying. The ratio of wood dry mass to wood fresh volume, measured on a stem segment without bark. |
comments | |
value type | continuous variable |
unit |
mg/mm3 milligram per cubic millimetre |
minAllowedValue | 0.05 |
maxAllowedValue | 1.4 |
has broader | stem morphology trait |
plant structure | stem |
measured characteristic |
mass volume density ratio; proportion mass density, density |
keyword |
wood wood, secondary xylem biomass allocation |
scope note | |
has exact match |
secondary xylem volumetric density, wood volumetric density Wood density |
has close match | |
has related match | |
examples |
exact match: Wood density [TOP284] (https://top-thesaurus.org/index) exact match: Stem specific density (SSD, stem dry mass per stem fresh volume) or wood density [TRY:4] (https://www.try-db.org/de/de.php) exact match: Stem specific density (SSD) [GIFT:4.3] (https://gift.uni-goettingen.de) exact match: stem wood density [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Stem specific density [BROT:11] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011815 |
Herbaceous stem density
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011816 |
alternative label | stem_density |
description |
A stem morphology trait [TO:0000361] which is the ratio [PATO:0001470] of the mass [PATO:0000125] of a unit of herbaceous [PATO:0002352] stem [PO:0009047] assessed after drying to its volume [PATO:0000918] assessed without drying. The ratio of stem dry mass to stem fresh volume, measured on an herbaceous stem segment. |
comments | This trait is specifically for non-woody or partially woody stems that otherwise are outliers for wood density |
value type | continuous variable |
unit |
mg/mm3 milligram per cubic millimetre |
minAllowedValue | 0.1 |
maxAllowedValue | 1.4 |
has broader | stem morphology trait |
plant structure | stem |
measured characteristic |
mass volume density ratio; proportion mass density, density |
keyword |
herbaceous biomass allocation |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Stem specific density (SSD, stem dry mass per stem fresh volume) or wood density [TRY:4] (https://www.try-db.org/de/de.php) exact match: Stem specific density (SSD) [GIFT:4.3] (https://gift.uni-goettingen.de) exact match: stem wood density [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Stem specific density [BROT:11] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011816 |
Stem hairiness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011817 |
alternative label | stem_hairs |
description |
A stem morphology trait [TO:0000361] which is the presence or absence of trichomes [PO:0006504] (hairs) on a stem [PO_0009047]. Variable describing whether plant stems have hairs (trichomes). |
comments | As stems often lose hairs as they age, the context field should indicate the stem age. |
value type | categorical variable |
has narrower |
stem_hairs_glabrous Adult plant stems do not have hairs (trichomes). stem_hairs_hairy Adult plant stems have hairs (trichomes). |
has broader | stem morphology trait |
plant structure | stem |
measured characteristic |
texture pilosity |
keyword | trichome |
scope note | |
has exact match | stem hairiness |
has close match | |
has related match | |
examples | close match: Stem emergences (pubescence, hairs, spines, thorns) [TRY:1256] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011817 |
Xylem to leaf area ratio (XLA)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011910 |
alternative label | xylem_to_leaf_area_ratio |
description |
A leaf morphology trait [TO:0000748] which is the ratio [PATO:0001470] of xylem vessel [PO:0025417] area [PATO:0001323] in a petiole [PO:0020038] to the attached leaf lamina [PO:0020039] area. For a single leaf, the ratio of xyem cross-sectional area at the base of the petiole to the leaf lamina area. |
comments | This trait is similar to Huber value, but at the level of a single leaf, not the entire branch. |
value type | continuous variable |
unit | cm2{xylem}/mm2{leaf} |
minAllowedValue | 0.01 |
maxAllowedValue | 100 |
has broader | leaf morphology trait |
plant structure | leaf |
measured characteristic |
area size dimensionless ratio ratio; proportion |
keyword |
biomass allocation xylem water transport leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Blackman 2023 |
date created | 03/06/2025 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011910 |
Huber value
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011911 |
alternative label | huber_value |
description |
A stem morphology trait [TO:0000361] which is the ratio [PATO:0001470] of sapwood [PO:0004513] area [PATO:0001323] to the total distal [PATO:0001234] leaf [PO:0025034] area. For a single branch, the ratio of sapwood cross-sectional area at the base of the branch to the branch’s total leaf area. |
comments | |
value type | continuous variable |
unit |
mm2{sapwood}/mm2{leaf} square millimetre per square millimetre |
minAllowedValue | 1e-06 |
maxAllowedValue | 0.2 |
has broader | stem morphology trait |
plant structure plant structure |
leaf stem |
measured characteristic |
area size dimensionless ratio ratio; proportion |
keyword |
sapwood biomass allocation |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Stem, branch or twig sapwood cross-sectional area per supported leaf area (Huber value) [TRY:171] (https://www.try-db.org/de/de.php) |
references | Tyree & Ewers 1991 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011911 |
Leaf dry mass to stem dry mass ratio
Stem dry mass to vegetative shoot dry mass ratio (support fraction)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011913 |
alternative label | stem_mass_to_shoot_mass_ratio |
description |
A plant dry mass trait [TO:0000352] which is the ratio [PATO:0001470] of stem [PO:0009047] and branch [PO:0025073] dry [PATO:0001824] mass [PATO:0000125] to vegetative shoot system [PO:0025607] dry mass. The ratio of whole plant stem dry mass to whole plant vegetative shoot dry mass. That is, the proportion of aboveground vegetative biomass that is comprised of stems and branches, rather than leaves; support fraction. |
comments | |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0 |
maxAllowedValue | 1 |
has broader |
leaf mass trait stem mass trait |
plant structure plant structure plant structure |
leaf stem whole plant |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
branch vegetative shoot system biomass allocation whole plant stem dry mass whole plant leaf dry mass |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Plant biomass and allometry: Supportive structure (stem, twig, leaf petiole, leaf sheeth) dry mass p [TRY:3059] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | support_fraction |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011913 |
Side branch dry mass to whole plant dry mass ratio
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011914 |
alternative label | branch_mass_fraction |
description |
A plant dry mass trait [TO:0000352] which is the ratio [PATO:0001470] of side branch [PO:0025073] dry [PATO:0001824] mass [PATO:0000125] to whole plant [PO:0000003] dry mass. The ratio of side branch dry mass to whole plant dry mass. That is, the proportion of total plant biomass that is comprised of all branches off the main shoot axis. |
comments | |
value type | continuous variable |
unit |
mg/mg milligram per milligram |
minAllowedValue | 0 |
maxAllowedValue | 1 |
has broader | stem mass trait |
plant structure plant structure |
stem whole plant |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
branch biomass allocation whole plant dry mass |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Plant biomass and allometry: Branch dry mass per plant dry mass [TRY:137] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011914 |
Stem dry matter content (SDMC)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011915 |
alternative label | stem_dry_matter_content |
description |
A stem mass trait [TO:0000952] which is the ratio [PATO:0001470] of stem [PO:0009047] (or branch [PO:0025073]) dry [PATO:0001824] mass [PATO:0000125] to stem (or branch) fresh mass [APD:glossary/40044]. The ratio of stem (or branch) dry mass to stem (or branch) fresh mass; SDMC. |
comments |
A related trait is stem_water_content_per_saturated_mass .
|
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 100 |
maxAllowedValue | 1000 |
has broader | stem mass trait |
plant structure | stem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
branch fresh mass water |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Stem dry mass per stem fresh mass (stem dry matter content, StDMC) [TRY:1181] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011915 |
Stem water content per unit saturated stem mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011916 |
alternative label | stem_water_content_per_saturated_mass |
description |
A stem mass trait [TO:0000952] which is the ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] in a stem [PO:0009047] to stem fresh mass [APD:glossary/40044] in a stem that is at maximum [NCIT:C25564] water holding capacity [IOBC:200906064703668091], known as full turgor [PATO:0001620]. The ratio of the mass of water in a stem (stem water content) to total stem mass, measured in a saturated stem. A saturated stem is one that has been hydrated to its maximal water holding capacity and is at full turgor. |
comments |
A related trait is stem_dry_matter_content .
|
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 10 |
has broader | stem mass trait |
plant structure | stem |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
water water holding capacity turgor fresh mass |
scope note | |
has exact match | |
has close match | |
has related match | stem moisture content |
examples | close match: Wood (sapwood) water content [TRY:1097] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011916 |
Stem mass fraction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011917 |
alternative label | stem_mass_fraction |
description |
A plant dry mass trait [TO:0000352] which is the ratio [PATO:0001470] of whole plant [PO:0000003] stem [PO:0009047] dry [PATO:0001824] mass [PATO:0000125] to whole plant dry mass [APD:glossary/40080]. The ratio of stem dry mass to whole plant dry mass. That is, the proportion of total plant biomass that is comprised of stems and branches. |
comments | |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader | stem mass trait |
plant structure plant structure |
stem whole plant |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
biomass allocation whole plant stem dry mass whole plant dry mass |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Plant biomass and allometry: Stem dry mass per plant dry mass [TRY:136] (https://www.try-db.org/de/de.php) related match: stem dry mass [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011917 |
Stem saturated water content per unit stem dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0011918 |
alternative label | stem_saturated_water_content_per_dry_mass |
description |
A stem mass trait [TO:0000952] which is the ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] in a saturated stem [PO:0009047] to stem dry [PATO:0001824] mass [PATO:0000125], where a saturated stem is one at maximum [NCIT:C25564] water holding capacity [IOBC:200906064703668091]. The ratio of the mass of water in a saturated stem to stem dry mass. |
comments |
Similar traits include stem_dry_matter_content , the ratio of a stem dry mass to stem fresh mass and stem_water_content_per_saturated_mass the ratio of the mass of water in a stem to saturated stem mass.
|
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 20 |
has broader | stem mass trait |
plant structure plant structure |
stem whole plant |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
biomass allocation whole plant stem dry mass whole plant dry mass |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 03/06/2025 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0011918 |
Bark morphology, Eucalyptus
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012010 |
alternative label | bark_morphology_eucalyptus |
description |
A bark morphology trait which is the texture [PATO:0000150] of the bark [PO:0004518] of Eucalyptus taxa. Broad categories that describe the texture of Eucalyptus bark. |
comments | This trait just records the morphology of taxa in the genera Eucalyptus, Corymbia, and Angophora. |
value type | categorical variable |
has narrower |
bark_morphology_eucalyptus_eucalypt_box Eucalyptus, Corymbia or Angophora taxa with ‘Box’ type bark. bark_morphology_eucalyptus_eucalypt_gum Eucalyptus, Corymbia or Angophora taxa with ‘Gum’ type bark. bark_morphology_eucalyptus_eucalypt_stocking Eucalyptus, Corymbia or Angophora taxa with ‘Gum’ type bark above a rough barked stocking. bark_morphology_eucalyptus_eucalypt_ironbark Eucalyptus, Corymbia or Angophora taxa with ‘Ironbark’ type bark. bark_morphology_eucalyptus_eucalypt_peppermint Eucalyptus, Corymbia or Angophora taxa with ‘Peppermint’ type bark. bark_morphology_eucalyptus_eucalypt_stringybark Eucalyptus, Corymbia or Angophora taxa with ‘Stringy’ type bark. bark_morphology_eucalyptus_eucalypt_ribbonbark Eucalyptus, Corymbia or Angophora taxa with ‘Gum’ type bark that sheds in ribbons. |
has broader | bark morphology trait |
plant structure | bark |
measured characteristic |
structure texture |
scope note | taxa in the genera Eucalyptus, Corymbia, and Angophora |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012010 |
Bark thickness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012011 |
alternative label | bark_thickness |
description |
A bark morphology trait which is the thickness [PATO:0000915] of the bark [PO:0004518]. The corresponding stem [PO:0009047] diameter [PATO:0001334] should also be recorded so that a scaled measure, the bark thickness to stem diameter ratio, can also be calculated. Thickness of the bark on the stem. |
comments | The corresponding stem diameter should also be recorded so that a scaled measure, the bark thickness to stem diameter ratio, can also be calculated. |
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 200 |
has broader | bark morphology trait |
plant structure | bark |
measured characteristic | thickness |
scope note | |
has exact match | Bark thickness |
has close match | |
has related match | |
examples |
exact match: Bark thickness [TOP283] (https://top-thesaurus.org/index) exact match: Bark thickness [TRY:24] (https://www.try-db.org/de/de.php) exact match: Bark thickness (inner bark) [TRY:3355] (https://www.try-db.org/de/de.php) exact match: Bark thickness (outer bark) [TRY:3356] (https://www.try-db.org/de/de.php) exact match: Average bark thickness [BROT:9] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012011 |
Scaled bark thickness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012012 |
alternative label | bark_thickness_index |
description |
A bark morphology trait which is the ratio [PATO:0001470] of two times bark [PO:0004518] thickness [PATO:0000915] to the stem [PO:0009047] diameter [PATO:0001334]. The ratio of two times a single bark thickness measure to stem diameter, to adjust for increasing bark thickness with increasing stem diameter. |
comments | |
value type | continuous variable |
unit |
mm/mm millimetre per millimetre |
minAllowedValue | 0.001 |
maxAllowedValue | 1 |
has broader | bark morphology trait |
plant structure plant structure |
bark stem |
measured characteristic |
thickness index |
keyword | biomass allocation |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
close match: Bark thickness [TOP283] (https://top-thesaurus.org/index) close match: Bark thickness [TRY:24] (https://www.try-db.org/de/de.php) close match: Bark thickness (inner bark) [TRY:3355] (https://www.try-db.org/de/de.php) close match: Bark thickness (outer bark) [TRY:3356] (https://www.try-db.org/de/de.php) |
references | Lawes 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012012 |
Bark density
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012013 |
alternative label | bark_density |
description |
The ratio [PATO:0001470] of bark [PO:0004518] dry [PATO:0001824] mass [PATO:0000125] to the corresponding fresh [EnvThes:21976] bark volume [PATO:0000918]. The ratio of bark dry mass to bark fresh volume. |
comments | |
value type | continuous variable |
unit |
mg/mm3 milligram per cubic millimetre |
minAllowedValue | 0.1 |
maxAllowedValue | 1.1 |
has broader | bark morphology trait |
plant structure | bark |
measured characteristic |
mass volume density ratio; proportion mass density, density |
keyword | biomass allocation |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Bark density [TOP282] (https://top-thesaurus.org/index) exact match: Bark density (bark dry mass per bark volume) [TRY:248] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012013 |
Bark dry mass per unit bark surface area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012014 |
alternative label | bark_dry_mass_per_surface_area |
description |
The ratio [PATO:0001470] of bark [PO:0004518] dry [PATO:0001824] mass [PATO:0000125] to the corresponding bark surface area [EnvThes:21564]. The ratio of bark dry mass to bark surface area. |
comments | |
value type | continuous variable |
unit |
g/cm2 gram per square centimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader | bark morphology trait |
plant structure | bark |
measured characteristic |
mass area density per unit area ratio; proportion mass density, density |
keyword | biomass allocation |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | bark_mass_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012014 |
Bark water content per unit bark dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012015 |
alternative label | bark_water_content_per_dry_mass |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] in bark [PO:0004518] (bark water content [APD:glossary/40014]) to bark dry [PATO:0001824] mass. The ratio of the mass of water in bark (bark water content) to bark dry mass. |
comments | |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader | bark morphology trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
water bark water content |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012015 |
Bark water content per unit saturated bark mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012016 |
alternative label | bark_water_content_per_saturated_mass |
description |
A bark mass trait [TO:0000952] which is the ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] in bark [PO:0004518] to the fresh mass [APD:glossary/40044] of bark that is at maximum [NCIT:C25564] water holding capacity [IOBC:200906064703668091], known as full turgor [PATO:0001620]. The ratio of the mass of water in bark (bark water content) to total bark mass, measured in saturated bark. Saturated bark is bark that has been hydrated to its maximal water holding capacity and is at full turgor. |
comments | |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 10 |
has broader | bark morphology trait |
plant structure | bark |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
water water holding capacity turgor fresh mass |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012016 |
Root diameter
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012111 |
alternative label | root_diameter |
description |
A root morphology trait [TO:0000043] which is the maximum [NCIT:C25564] root [PO:0009005] diameter [PATO:0001334] of a plant. Maximum root diameter. |
comments | |
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 1000 |
has broader | root morphology trait |
plant structure | root |
measured characteristic |
diameter size |
keyword | root morphology trait |
scope note | |
has exact match | root width |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012111 |
Root system morphology
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012112 |
alternative label | root_system_classification |
description |
A root system morphology trait [TO:0000985] which are categorical [STATO:0000252] trait values that capture the branchiness [PATO:0002009] and texture [PATO:0000150] of the root system [PO:0025025] and the root system depth [TO:0001058]. Categorical root system descriptions that indicate the branchiness and texture of the root system and the depth of the root system. |
comments | The trait values listed are those specified in the root system classification scheme proposed by Cannon in 1949. |
value type | categorical variable |
has narrower |
root_system_classification_type_i The primary root is fibrous or fleshy and is relatively long; mesophytic. root_system_classification_type_ii The primary root is relatively short and is fibrous. Roots are well branched in a dry habitat but branch little in one that is wet. root_system_classification_type_iii The primary root is usually long and fibrous. The first order lateral roots are well branched and are usually short; they are rather evenly distributed along the primary root; xerophytic. root_system_classification_type_iv The primary root is usually long and slender like that of Type II. The first order lateral roots are well branched. Those closest to the surface of the ground, or not far below, are relatively long; xerophytic and mesophytic. root_system_classification_type_v The primary root is divided-forked or branched-and fibrous, and with few first order lateral roots, or, in age, apparently with none; xerophytic. root_system_classification_type_vi The primary root is usually as in Type V. The first order lateral roots are mostly on the upper portion of the primary root and are thus relatively superficial; xerophytic or in well aerated sandy soil where the rainfall is not light. root_system_classification_type_vii Adventitious roots that are in one group and arise on a short horizontal, or vertical, axis of the shoot. They are fibrous or fleshly; mesophytic and hydrophytic. root_system_classification_type_viii Adventitious roots that are in one group and are fibrous and fleshy, or fibrous and thick. The fibrous adventitious roots are absorbing-anchoring roots and are usually with laterals to the second order; meophytic. root_system_classification_type_ix Adventitious roots that arise on the aerial stem and branches of some herbaceous taxa, shrubs, and trees; on creepers, vines, and runners; and on subterranean rhizomes and stolons. |
has broader | root morphology trait |
plant structure | root |
measured characteristic |
volume 3-D extent size texture spatial pattern, distribution |
keyword |
root system root system depth root branchiness root texture |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Cannon 1949 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | root_morphology |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012112 |
Fine root volume to coarse root volume ratio
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012113 |
alternative label | root_fine_root_coarse_root_ratio |
description |
A root system morphology trait [TO:0000985] which is the ratio [PATO:0001470] of the volume [PATO:0000918] of fine roots [EnvThes:20581] (those <0.5mm in diameter) to the volume of coarse roots [APD:glossary/40026] (those >0.5 mm in diameter). The ratio of the volume of fine roots (<0.5mm diameter) to the volume of coarse roots (>0.5mm diameter). |
comments | |
value type | continuous variable |
unit |
mm3/mm3 cubic millimetre per cubic millimetre |
minAllowedValue | 0.05 |
maxAllowedValue | 50 |
has broader | root morphology trait |
plant structure | root |
measured characteristic |
volume ratio; proportion |
keyword |
fine root root branchiness coarse root |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Fine root dry mass fraction that is taproot (taproot dry mass per fine root dry mass) [TRY:2011] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012113 |
Root biomass depth distribution coefficient
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012114 |
alternative label | root_distribution_coefficient |
description |
A root system morphology trait [TO:0000985] which is a model parameter [STATO:0000034] indicating the distribution [PATO:0000060] of a plant’s roots [PO:0009005] with depth [PATO:0001595]. To calculate the model parameter, the required input is a plot of the cumulative root distribution from the surface, where [Y] is the cumulative fraction of roots from the surface to a depth [d]. An asymptotic nonlinear model is used to describe the vertical root distribution: Y = 1 - b^d where Y is the cumulative root fraction from the surface to soil depth d in centimeters and b the estimated parameter. Root biomass depth distribution coefficient (‘B’ from Gale & Grigal 1987), where high values indicate that root biomass is allocated deeper in the soil. To calculate the model parameter, the required input is a plot of the cumulative root distribution from the surface, where [Y] is the cumulative fraction of roots from the surface to a depth [d]. An asymptotic nonlinear model is used to describe the vertical root distribution: Y = 1 - b^d where Y is the cumulative root fraction from the surface to soil depth d in centimeters and b the estimated parameter. |
comments | |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 0.5 |
maxAllowedValue | 1 |
has broader | root morphology trait |
plant structure | root |
measured characteristic |
mass model parameter spatial pattern, distribution |
keyword |
root branchiness root system depth root system |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Root evenness of dry mass vertical distribution [TRY:3033] (https://www.try-db.org/de/de.php) |
references | Gale and Grigal 1987 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012114 |
Root system type (presence of taproot)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012115 |
alternative label | root_system_type |
description |
A root system morphology trait [TO:0000985] which indicates if the root system [PO:0025025] is one where the primary root [PO:0020127] remains the dominant root, developing into a taproot, a long [PATO:0000573], thick [PATO:0000591] root with few branches, or whether the lateral roots [PO:0020121] are of similar length to the primary root. Variable describing whether a plant has a tap root. |
comments | |
value type | categorical variable |
has narrower |
root_system_type_tap_root_absent Tap root not present. root_system_type_tap_root_present Tap root present. root_system_type_tap_root_sometimes_present Tap root sometimes present. |
has broader | root morphology trait |
plant structure | root |
measured characteristic |
structure spatial pattern, distribution |
keyword |
root system primary root lateral root root branchiness |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | tap_root; root_tap_root_status |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012115 |
Specific root length (SRL)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012116 |
alternative label | root_specific_root_length |
description |
A root morphology trait [TO:0000043] which is the ratio [PATO:0001470] of root [PO:0009005] length [PATO:0000122] to root dry mass [TO:0000078]. The ratio of root length to root dry mass; SRL. |
comments | |
value type | continuous variable |
unit |
m/g metre per gram |
minAllowedValue | 0.5 |
maxAllowedValue | 5000 |
has broader | root morphology trait |
plant structure | root |
measured characteristic |
length ratio; proportion mass |
keyword |
biomass allocation root system primary root lateral root |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Specific root length trait [TOP935] (https://top-thesaurus.org/index) exact match: Root length per root dry mass (specific root length, SRL) [TRY:1080] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | specific_root_length |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012116 |
Specific tap root length (STRL)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012117 |
alternative label | root_specific_taproot_length |
description |
A root morphology trait [TO:0000043] which is the ratio [PATO:0001470] of primary root [PO:0020127] length [PATO:0000122] to primary root dry mass [TO:0000078] The ratio of taproot length (primary root length) to taproot dry mass; STRL. |
comments | This trait is usually measured during the very early stage of growth, capturing how efficiently seedlings reach reliable water. |
value type | continuous variable |
unit |
m/g metre per gram |
minAllowedValue | 0.5 |
maxAllowedValue | 5000 |
has broader | root morphology trait |
plant structure | root |
measured characteristic |
length ratio; proportion mass |
keyword |
biomass allocation root system primary root |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Coarse root length per coarse root dry mass (specific coarse root length, SRL) [TRY:1550] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | specific_taproot_length |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012117 |
Root surface area per unit root dry mass (specific root area)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012118 |
alternative label | root_specific_root_area |
description |
A root morphology trait [TO:0000043] which is the ratio [PATO:0001470] of root [PO:0009005] surface area [EnvThes:21564] to root dry mass [TO:0000078]. The ratio of root surface area to root dry mass; specific root area. |
comments | |
value type | continuous variable |
unit |
mm2/mg square millimetre per milligram |
minAllowedValue | 0.001 |
maxAllowedValue | 1 |
has broader | root morphology trait |
plant structure | root |
measured characteristic |
area size ratio; proportion area density mass density, density |
keyword |
biomass allocation root system |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Root surface area per root dry mass (specific root area) [TRY:1089] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | specific_root_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012118 |
Root wood density
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012119 |
alternative label | root_wood_density |
description |
A root morphology trait [TO:0000043] which is the ratio [PATO:0001470] of the dry mass [PATO:0000125] of a unit of wood [PO_0005848] from a root [PO:0009005]to its fresh fresh [EnvThes:21976] volume [PATO:0000918]. The ratio of woody root dry mass to woody root fresh volume. |
comments | |
value type | continuous variable |
unit |
mg/mm3 milligram per cubic millimetre |
minAllowedValue | 0.05 |
maxAllowedValue | 10 |
has broader | root morphology trait |
plant structure | root |
measured characteristic |
mass volume density ratio; proportion mass density, density |
keyword |
biomass allocation root system wood, secondary xylem |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Root tissue density (root dry mass per root volume) [TRY:82] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012119 |
Root to shoot ratio
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012120 |
alternative label | root_shoot_ratio |
description |
A whole plant morphology trait [TO:0000398] which is the ratio [PATO:0001470] of a plant’s root dry mass [TO:0000078] to its shoot dry mass [TO:0000552]. The ratio of total root system dry mass to total shoot system dry mass. |
comments | This trait is usually measured on experimentally grown seedlings where it is possible to collect the entire root system. |
value type | continuous variable |
unit |
mg{root}/mg{shoot} milligram per milligram |
minAllowedValue | 0.01 |
maxAllowedValue | 15 |
has broader |
root morphology trait stem morphology trait |
plant structure plant structure plant structure |
root whole plant stem |
measured characteristic |
mass ratio; proportion ratio; proportion mass fraction mass density, density |
keyword |
biomass allocation root system |
scope note | |
has exact match | root to shoot ratio |
has close match | |
has related match | |
examples |
exact match: Root/shoot ratio [TRY:9] (https://www.try-db.org/de/de.php) exact match: Shoot:root ratio [BROT:22] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012120 |
Root dry matter content (RDMC)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012121 |
alternative label | root_dry_matter_content |
description |
A root mass trait [TO:0000279] which is the ratio [PATO:0001470] of root dry mass [TO:0000078] to root [PO:0009005] fresh mass [APD:glossary/40044]. The ratio of root dry mass to root fresh mass; root dry matter content, RDMC. |
comments | |
value type | continuous variable |
unit |
mg/g milligram per gram |
minAllowedValue | 10 |
maxAllowedValue | 1000 |
has broader | root morphology trait |
plant structure | root |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
biomass allocation root system fresh mass |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Root dry mass per root fresh mass (root dry matter content, RDMC) [TRY:785] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012121 |
Root mass fraction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012122 |
alternative label | root_mass_fraction |
description |
A root mass trait [TO:0000279] which is the ratio [PATO:0001470] of the total root dry mass [TO:0000078] to whole plant [PO:0000003] dry mass [APD:glossary/40080]. The ratio of total root system dry mass to whole plant dry mass. |
comments | |
value type | continuous variable |
unit |
mg/mg milligram per milligram |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader | root morphology trait |
plant structure plant structure |
root whole plant |
measured characteristic |
mass mass fraction ratio; proportion |
keyword |
biomass allocation whole plant dry mass root system |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Plant biomass and allometry: Root mass fraction (fraction of root dry mass per whole plant dry mass) [TRY:470] (https://www.try-db.org/de/de.php) related match: root dry mass [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012122 |
Root vascular anatomy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012123 |
alternative label | root_vascular_anatomy |
description |
A root system morphology trait [TO:0000985] which is the arrangement [NCIT:C61532] or type [NCIT:C25284] of the root [PO:0020127] vascular system [PO:0003011]. The arrangement or type of the root vascular system. |
comments | |
value type | categorical variable |
has narrower |
root_vascular_anatomy_cord_roots A root anatomy found within three genera of Mirbelieae (Daviesia, Euchilopsis, Phyllota) wherein networks of interlinking vascular strands exist (Crisp 2003; Pate and Dixon 1996). root_vascular_anatomy_unistelar_roots The commonly observed root anatomy, wherein there is a single vascular strand which displays secondary thickening. |
has broader | root morphology trait |
plant structure | root |
measured characteristic |
volume 3-D extent size texture spatial pattern, distribution |
keyword |
root system root vascular cambium |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Cannon 1949 |
date created | 03/06/2025 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012123 |
Storage organ length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012151 |
alternative label | storage_organ_length |
description |
A plant structure morphology trait [TO:0000839] which is the length [PATO:0000122] of a plant’s storage organ [EFO:0000997], where a storage organ is a plant part (organ [PO:0009008], tissue [PO:0009007], or other plant structure [PO:0009011]) whose function [NCIT:C25518] is carbohydrate [CHEBI:16646] (energy [PATO:0001021]) storage. The length of an underground plant structure (tissues, organs, or other structures) where a plant stores excess carbohydrates (energy). |
comments |
This can be the length of any of the structures documented in the trait storage_organ and should be documented as an entity context.
|
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 1 |
maxAllowedValue | 1000 |
has broader |
stem morphology trait root morphology trait |
plant structure plant structure |
root stem |
measured characteristic |
length size |
keyword |
storage organ energy |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012151 |
Storage organ diameter
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012152 |
alternative label | storage_organ_diameter |
description |
A plant structure morphology trait [TO:0000839] which is the diameter [PATO:0001334] of a plant’s storage organ [EFO:0000997], where a storage organ is a plant part (organ [PO:0009008], tissue [PO:0009007], or other plant structure [PO:0009011]) whose function [NCIT:C25518] is carbohydrate [CHEBI:16646] (energy [PATO:0001021]) storage. The width of an underground plant structure (tissues, organs, or other structures) where a plant stores excess carbohydrates (energy). |
comments |
This can be the length of any of the structures documented in the trait storage_organ and should be documented as an entity context.
|
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 1 |
maxAllowedValue | 1000 |
has broader |
stem morphology trait root morphology trait |
plant structure plant structure |
root stem |
measured characteristic |
diameter size |
keyword |
storage organ energy |
scope note | |
has exact match | |
has close match | tuberous root tuber diameter |
has related match | |
examples | exact match: Belowground plant organ diameter [TRY:2550] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012152 |
Seed accessory cost fraction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012221 |
alternative label | accessory_cost_fraction |
description |
A reproductive shoot system [PO:0025082] biomass allocation [EnvThes:21360] trait which is one minus the ratio [PATO:0001470] of total plant seed [PO:0009010] dry [PATO:0001824] mass [PATO:0000125] to total plant reproductive shoot system tissue dry mass where reproductive tissues include all flower buds [PO:0000056], flowers [PO:0009046], fruits [PO:0009001], dispersal [EnvThes:21038] tissues, and seeds produced during the developmental process involved in reproduction [GO:0003006]. The fraction of total reproductive investment required to mature a seed that is invested in non-seed tissues. It is calculated as one minus, the ratio of total biomass investment in seeds to total biomass investment in all reproductive tissues, including flower buds, flowers, fruits, dispersal tissues, aborted seeds, and successfully matured seeds. |
comments | |
value type | continuous variable |
unit |
mg/mg milligram per milligram |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader | reproductive shoot system morphology trait |
plant structure plant structure plant structure plant structure |
reproductive shoot system flower fruit seed |
measured characteristic | mass |
keyword |
biomass allocation reproduction accessory cost |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Plant biomass and allometry: Reproductive dry mass per plant dry mass (reproductive weight fraction) [TRY:1046] (https://www.try-db.org/de/de.php) |
references | Lord & Westoby 2006 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012221 |
Seed accessory cost mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012222 |
alternative label | accessory_cost_mass |
description |
A reproductive shoot system [PO:0025082] biomass allocation [EnvThes:21360] trait which is the sum of the dry [PATO:0001824] mass [PATO:0000125] of all flower buds [PO:0000055], flowers [PO:0009046], fruits [PO:0009001], aborted seeds, and dispersal [EnvThes:21038] tissues produced during the developmental process involved in reproduction [GO:0003006], but excludes mature [PATO:0001701] seed [PO:0009010] dry mass. The mass of seed accessory costs, which is the total biomass investment in all reproductive tissues, excluding biomass invested in successfully matured seeds; it includes all biomass invested in flower buds, flowers, fruits, dispersal tissues and aborted seeds. |
comments | |
value type | continuous variable |
unit |
mg milligram |
minAllowedValue | 0.01 |
maxAllowedValue | 10000 |
has broader | reproductive shoot system morphology trait |
plant structure plant structure plant structure plant structure |
reproductive shoot system flower fruit seed |
measured characteristic | mass |
keyword |
biomass allocation reproduction accessory cost |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Lord & Westoby 2006 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012222 |
Bud length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012301 |
alternative label | bud_length |
description |
A floral organ morphology trait [TO:0000862] which is the length [PATO:0000122] of the bud [PO:0000055] from the base of the receptable [PO:0009064] or the base of an inferior ovary [PO:0009072] to the tip of the bud. Linear dimension from the base to the apex of a bud, even if this is not the longest dimension. |
comments | |
value type | continuous variable |
unit | cm |
minAllowedValue | 0.01 |
maxAllowedValue | 200 |
has broader | floral organ morphology trait |
plant structure plant structure |
reproductive shoot system bud |
measured characteristic |
length size |
scope note | |
has exact match |
reproduction corolla perianth |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 05/02/2024 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012301 |
Bud width
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012302 |
alternative label | bud_width |
description |
A floral organ morphology trait [TO:0000862] which is the width [PATO:0000921] of the bud [PO:0000055] from the base of the receptable [PO:0009064] or the base of an inferior ovary [PO:0009072] to the tip of the bud. Width is the greatest linear dimension [PATO:0001708] perpendicular to [PATO:0002434] to the bud length [PATO:0000122] Greatest linear width dimension of a bud, sometimes referred to as ‘diameter’ in buds where the width and height are identical; orthogonal to the bud length, the base-to-apex dimension. |
comments | |
value type | continuous variable |
unit | cm |
minAllowedValue | 0.01 |
maxAllowedValue | 200 |
has broader | floral organ morphology trait |
plant structure plant structure |
reproductive shoot system bud |
measured characteristic |
width size |
scope note | |
has exact match |
reproduction corolla perianth |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 05/02/2024 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012302 |
Buds per inflorescence
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012351 |
alternative label | buds_per_inflorescence |
description |
A floral organ morphology trait [TO:0000862] which is the count [NCIT:C25463] of buds [PO:0000055] in an inflorescence [PO:0009049], where an inflorescence can be either a single cluster of flowers or the entire reproductive shoot system [PO:0025082]. The count of buds in an inflorescence, where an inflorescence can be either a single cluster of flowers or the entire reproductive shoot system. |
comments | |
value type | continuous variable |
unit | {count}/{count} |
minAllowedValue | 1 |
maxAllowedValue | 1000 |
has broader | floral organ morphology trait |
plant structure plant structure plant structure |
reproductive shoot system bud inflorescence |
measured characteristic |
has number of dimensionless ratio ratio; proportion count tolerance sensitivity |
scope note | |
has exact match |
reproduction reproductive shoot system inflorescence |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 05/02/2024 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012351 |
Inflorescence length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012352 |
alternative label | inflorescence_length |
description |
A floral organ morphology trait [TO:0000862] which is the vertical [PATO:0001854] length [PATO:0000122] (height [PATO:0000119]) of the inflorescence [PO:0009049], where an inflorescence can be either a single cluster of flowers [PO:0009046] or the entire reproductive shoot system [PO:0025082]. The vertical length (height) of an inflorescence. |
comments | |
value type | continuous variable |
unit | cm |
minAllowedValue | 0.01 |
maxAllowedValue | 1500 |
has broader | perianth morphology trait |
plant structure plant structure plant structure |
reproductive shoot system bud inflorescence |
measured characteristic |
length size |
keyword |
floral organ morphology trait flower reproductive shoot system inflorescence morphology trait |
scope note | |
has exact match | inflorescence length |
has close match | |
has related match | |
examples | exact match: Inflorescence length (height) [TRY:2817] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012352 |
Inflorescence diameter
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012353 |
alternative label | inflorescence_diameter |
description |
A floral organ morphology trait [TO:0000862] which is the diameter [PATO:0001334] of the inflorescence [PO:0009049], where an inflorescence can be either a single cluster of flowers [PO:0009046] or the entire reproductive shoot system [PO:0025082]. The diameter (of greatest width dimension) of an inflorescence. |
comments | |
value type | continuous variable |
unit | cm |
minAllowedValue | 0.01 |
maxAllowedValue | 1500 |
has broader | perianth morphology trait |
plant structure plant structure plant structure |
reproductive shoot system bud inflorescence |
measured characteristic |
diameter size |
keyword |
floral organ morphology trait flower reproductive shoot system inflorescence morphology trait |
scope note | |
has exact match | inflorescence diameter |
has close match | |
has related match | |
examples | exact match: Inflorescence diameter [TRY:3587] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012353 |
Number of androecium parts in each whorl (Androecium structural merism)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012410 |
alternative label | flower_androecium_structural_merism |
description |
An androecium morphology trait [TO:0000994] which is the total count [NCIT:C25463] of stamens [PO:0009029], staminodes [PO:0009077] or stamen bundles (fascicles [NCIT:C79692]) in each floral whorl [PO:0025023]. The number of stamens or stamen bundles (fascicles) in one whorl, considering both fertile stamens and staminodes. |
comments | This character is not applicable for spiral or irregular stamen arrangements, nor when there is a single structural stamen (i.e., one stamen, no staminodes; e.g., Chloranthus, Chloranthaceae). Definition derived from Schoenenberger et al. (2020) for their character ‘332. Androecium structural merism (C1)’ |
value type | continuous variable |
unit | {count} |
minAllowedValue | 0 |
maxAllowedValue | 100 |
has broader | androecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
has number of count |
keyword |
reproduction androecium stamen staminode fascicle merism whorl, floral whorl |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012410 |
Androecium structural phyllotaxis
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012411 |
alternative label | flower_androecium_structural_phyllotaxis |
description |
An androecium morphology trait [TO:0000994] which is the spatial pattern or distribution [PATO:0000060] (phyllotaxy [TO:0006014]) of stamen [PO:0009029], staminodes [PO:0009077] or stamen bundles (fascicles [NCIT:C79692]) in each floral whorl [PO:0025023]. Structural phyllotaxy of the androecium, considering both fertile stamens and staminodes. In cases of stamen fascicles, it is the phyllotaxis of fascicles, not individual stamens that are recorded. |
comments | This character is not applicable when there is a single structural stamen (i.e., one stamen, no staminodes; e.g., Chloranthus, Chloranthaceae). Definition and trait values derived from Schoenenberger et al. (2020) for their character ‘330. Androecium structural phyllotaxy (D1)’ |
value type | categorical variable |
has narrower |
flower_androecium_structural_phyllotaxis_whorled Stamens and staminodes arranged in whorls. flower_androecium_structural_phyllotaxis_spiral Stamens and staminodes have a spiral arrangement. flower_androecium_structural_phyllotaxis_irregular Stamens and staminodes have an irregular arrangement. |
has broader | androecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic | spatial pattern, distribution |
keyword |
reproduction androecium phyllotaxy stamen staminode fascicle whorl, floral whorl |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012411 |
Number of androecium structural whorls
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012412 |
alternative label | flower_androecium_structural_whorls_count |
description |
An androecium morphology trait [TO:0000994] which is the total count [NCIT:C25463] of whorls [PO:0025023] comprising the androecium [PO:0009061], considering both stamen [PO:0009029] and staminodes [PO:0009077]. If stamens are grouped into fascicles [NCIT:C79692], the trait is the count of whorls of fascicles. The number of whorls, considering both fertile stamens and staminodes. In cases of stamen fascicles, the count of whorls of fascicles is recorded. |
comments | This character is not applicable for spiral or irregular stamen arrangements, or when there is a single structural stamen (i.e., one stamen, no staminodes; e.g., Chloranthus, Chloranthaceae). Definition derived from Schoenenberger et al. (2020) for their character ‘331. Number of androecium structural whorls (C1)’ |
value type | continuous variable |
unit | {count} |
minAllowedValue | 0 |
maxAllowedValue | 100 |
has broader | androecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
has number of count |
keyword |
reproduction androecium stamen staminode fascicle merism whorl, floral whorl |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012412 |
Anther attachment
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012413 |
alternative label | flower_anther_attachment |
description |
An androecium morphology trait [TO:0000994] which indicates how the filament [PO:0009067] is attached to [PATO:0001667] the tissue [CARO:0000043] connecting the two thecae [PO:0009069] (pollen [PO:0025281] sacs) of the anthers [PO:0009066], affecting the spatial pattern [PATO:0000060] of the stamens [PO:0009029]. Anther attachment refers to the area of insertion of the filament on the anther connective (i.e. the tissue connecting the two thecae of an anther). |
comments | Definition and trait values derived from Schoenenberger et al. (2020) for their character ‘312. Anther attachment (D1)’ |
value type | categorical variable |
has narrower |
flower_anther_attachment_basifixed Filament attached to the base of the connective. Laminar stamens are classified as basifixed. flower_anther_attachment_dorsifixed Filament attached to the dorsal side of the anther. flower_anther_attachment_dorsifixed_at_base Filament attached to the dorsal side of the anther, at the base. flower_anther_attachment_ventrifixed Filament attached to the ventral side of the anther. |
has broader | androecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic | spatial pattern, distribution |
keyword |
reproduction androecium stamen anther pollen connective anther theca filament |
scope note | |
has exact match | |
has close match | |
has related match | anther attachment quality |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012413 |
Connective extension (apical)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012414 |
alternative label | flower_anther_connective_extension |
description |
An androecium morphology trait [TO:0000994] which is whether anthers [PO:0009066] have protrusions [NCIT:C50710] that extend above the two theca [PO:0009069] (pollen [PO:0025281] sacs), and, if present, the shape [PATO:0000052] and the relative length [PATO:0000122] of the protrusion relative to the length of the entire anther. Apical (distal) connective extensions (also called ‘distal connective protrusions’) are sterile anther structures that distally extend beyond the level of the thecae (i.e., the two lateral pairs of pollen sacs of a tetrasporangiate anther). |
comments | This trait records both absence or presence of anther connective extensions and also the shape of these extensions in terms of length in relation to the length of the thecae. Definition and trait values derived from Schoenenberger et al. (2020) for their character ‘314. Connective extension (apical) (D1)’ |
value type | categorical variable |
has narrower |
flower_anther_connective_extension_absent Apical connective extensions are lacking. flower_anther_connective_extension_short_extension Connective extension less than a third of the length of anther. flower_anther_connective_extension_long_extension Connective extension more than a third but less than length of anther; e.g. Idiospermum australiense. flower_anther_connective_extension_very_long_extension Connective extension more than length of anther; e.g. Galbulimima belgraveana. flower_anther_connective_extension_present_general Apical connective extensions are present but no information on their length relative to the anthers. |
has broader | androecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
structure shape length |
keyword |
reproduction androecium stamen anther pollen connective anther theca |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012414 |
Anther dehiscence
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012415 |
alternative label | flower_anther_dehiscence |
description |
An androecium morphology trait [TO:0000994] which is the length [PATO:0000122] and shape [PATO:0000052] of the stomia [PO:0020101] that form the anther dehiscence zone [PO:0005011]; stomia are the usually slit-like [PATO:0002482] openings in the anther [PO:0009066] through which pollen [PO:0025281] is released. Anther dehiscence refers to the type of opening of the anther when releasing its pollen through the stomia. |
comments | Definition and trait values derived from Schoenenberger et al. (2020) for their character ‘313. Anther dehiscence (D1)’ |
value type | categorical variable |
has narrower |
flower_anther_dehiscence_longitudinal_slit Anther with longitudinal slits that extend along the entire length of each theca. flower_anther_dehiscence_poricidal Anther where dehiscence of longitudinal slits is incomplete, with pollen exiting via a small pore at the tip. flower_anther_dehiscence_pores_many Anther with pollen exiting from many pores along its length. flower_anther_dehiscence_h_valvate Anther with two valves on longitudinal hinges, opening horizontally as salon doors; when the stomium bifurcates at its distal and/or proximal end and thus a valve is formed. flower_anther_dehiscence_flap_valvate Anther with one or more flap-like valves on horizontal hinges, opening vertically. flower_anther_dehiscence_transverse_slit Anther with horizontal slit. flower_anther_dehiscence_short_basal_slits Anther where dehiscence of longitudinal slits is incomplete and only occurs over a short extent at the base of the theca. flower_anther_dehiscence_short_central_slits Anther where dehiscence of longitudinal slits is incomplete and only occurs over a short extent at the center of the theca. flower_anther_dehiscence_short_apical_slits Anther where dehiscence of longitudinal slits is incomplete and only occurs over a short extent at the apical end of the theca. flower_anther_dehiscence_t_valvate Anther with T-shaped stomium; reduced transverse slit at base. flower_anther_dehiscence_common_stomium_confluent_thecae The two thecae of a single anther are fused at one end with a single pore through which pollen exits. flower_anther_dehiscence_circular Anther with a transverse slit that goes entirely around the anther. |
has broader | androecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
structure shape length |
keyword |
reproduction androecium stamen anther pollen stomium anther dehiscence zone |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012415 |
Anther orientation
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012416 |
alternative label | flower_anther_orientation |
description |
An androecium morphology trait [TO:0000994] which is the position [PATO:0000140] and orientation [PATO:0000133] of the stomia [PO:0020101] that form the anther dehiscence zone [PO:0005011]; stomia are the slit-like [PATO:0002482] openings in the anther [PO:0009066] through which pollen [PO:0025281] is released. Orientation of anther at anthesis. |
comments | Anthers of angiosperms are rather uniform in their basic structure. They normally have four microsporangia (pollen sacs) that are arranged pair-wise in two thecae. The two microsporangia of a theca usually release their pollen grains through a common opening (stomium). Often, it is difficult to establish anther orientation clearly in a flower as this is a gradual feature with many intermediate stages. Definition and trait values derived from Schoenenberger et al. (2020) for their character ‘311. Anther orientation (D1)’ |
value type | categorical variable |
has narrower |
flower_anther_orientation_apical When thecae are positioned in a transverse position at the tip of the connective and thus dehisce upward in the flower (e.g., Sinofranchetia, Endress and Hufford, 1989). flower_anther_orientation_extrorse When the stomia of the thecae face the floral periphery. flower_anther_orientation_introrse When the stomia of the thecae face the floral centre. flower_anther_orientation_latrorse When pollen is released toward the side (i.e., toward neighbouring anthers). |
has broader | androecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
spatial pattern, distribution orientation position |
keyword |
reproduction androecium stamen anther pollen stomium anther dehiscence zone |
scope note | |
has exact match | |
has close match | anther orientation |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012416 |
Flower colour
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012417 |
alternative label | flower_colour |
description |
A floral organ morphology trait [TO:0000862] which is the dominant (primary [NCIT:C25251]) colour [PATO:0000014] of the flower [PO:0009046. The petals [PO:0009032] (corolla [PO:0009059]), sepals [PO:0009031] (calyx [PO:0009060]), or the entire perianth [PO:0009058] may be responsible for the main colour observed. The dominant flower colour, where the entire flower, the petals, or the sepals may be responsible for the observed colour. |
comments |
Most data mapped to flower_colour has probably been scored based on perianth colour, but if a dataset does not differentiate between the two traits it is mapped to flower_colour .
|
value type | categorical variable |
has narrower |
flower_colour_blue_purple Flower colour is blue or purple. flower_colour_green Flower colour is green. flower_colour_pink Flower colour is pink. flower_colour_red_brown Flower colour is red or brown. flower_colour_white_cream Flower colour is white or cream. flower_colour_yellow_orange Flower colour is yellow or orange. flower_colour_grey Flower colour is grey. flower_colour_black Flower colour is black. |
has broader | perianth morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic | colour / color |
keyword |
reproduction petal corolla sepal calyx perianth |
scope note | |
has exact match | flower color |
has close match | corolla color |
has related match | |
examples |
exact match: Flower color [TOP242] (https://top-thesaurus.org/index) exact match: Flower color [TRY:207] (https://www.try-db.org/de/de.php) exact match: Flower_colour [GIFT:3.21.1] (https://gift.uni-goettingen.de) exact match: flower color [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012417 |
Perianth colour
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012418 |
alternative label | perianth_colour |
description |
A floral organ morphology trait [TO:0000862] which is the dominant (primary [NCIT:C25251]) colour [PATO:0000014] of the perianth [PO:0009058] parts (sepals [PO:0009031], petals [PO:0009032], and tepals [PO:0009033]). The dominant colour of the perianth parts (sepals, petals and tepals). |
comments |
This trait refers explicitly to the colour of the petals, sepals and tepals, while the trait ‘flower colour’ refers to the colour of the entire flower. See also data under flower_colour . Most data mapped to flower_colour has probably been scored based on perianth colour, but if a dataset does not differentiate between the two traits it is mapped to flower_colour .
|
value type | categorical variable |
has narrower |
perianth_colour_white Perianth colour is white. perianth_colour_yellow Perianth colour is yellow. perianth_colour_orange Perianth colour is orange. perianth_colour_red Perianth colour is red. perianth_colour_pink Perianth colour is pink. perianth_colour_purple Perianth colour is purple. perianth_colour_blue Perianth colour is blue. perianth_colour_green Perianth colour is green. perianth_colour_grey Perianth colour is grey. perianth_colour_brown Perianth colour is brown. perianth_colour_black Perianth colour is black. |
has broader | perianth morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic | colour / color |
keyword |
reproduction petal corolla sepal calyx perianth |
scope note | |
has exact match | |
has close match | corolla color |
has related match | |
examples |
exact match: Flower color [TOP242] (https://top-thesaurus.org/index) exact match: Flower color [TRY:207] (https://www.try-db.org/de/de.php) exact match: Flower_colour [GIFT:3.21.1] (https://gift.uni-goettingen.de) exact match: flower color [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | no linked references |
date created | 19/05/2023 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012418 |
Flower length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012419 |
alternative label | flower_length |
description |
A floral organ morphology trait [TO:0000862] which is the length [PATO:0000122] of the flower [PO:0009046] from the base of the receptable [PO:0009064] or the base of an inferior ovary [PO:0009072] to the tip of the flower, measured at anthesis [PO:0009068]. It excludes the length of the pedicel [PO:0030112]. The length of the flower. |
comments | |
value type | continuous variable |
unit | cm |
minAllowedValue | 0.01 |
maxAllowedValue | 200 |
has broader | perianth morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic | length |
keyword |
reproduction petal corolla sepal calyx perianth |
scope note | |
has exact match | flower length |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 19/05/2023 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012419 |
Flower diameter
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012420 |
alternative label | flower_diameter |
description |
A floral organ morphology trait [TO:0000862] which is the maximum diameter [PATO:0001334] of the flower [PO:0009046] at anthesis [PO:0009068], considering all floral organs, but most commonly the diameter from petal [PO:0009032] tip to petal tip. The maximum diameter of the flower at anthesis, considering all floral organs, but most commonly the diameter from petal tip to petal tip. |
comments | |
value type | continuous variable |
unit | cm |
minAllowedValue | 0.01 |
maxAllowedValue | 200 |
has broader | perianth morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic | diameter |
keyword |
reproduction petal corolla sepal calyx perianth |
scope note | |
has exact match | flower diameter |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 19/05/2023 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012420 |
Floral orientation
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012421 |
alternative label | flower_orientation |
description |
A floral organ morphology trait [TO:0000862] which is the position [PATO:0000140] and orientation [PATO:0000133] of the flower [PO:0009046]. The position and orientation of the flower. |
comments | |
value type | categorical variable |
has narrower |
flower_orientation_up Flower orientation is vertical, with the floral entrance pointing up. flower_orientation_lateral Flower orientation is horizontal, with the floral entrance perpendicular to main vertical axis. flower_orientation_down Flower orientation is pendant, with the floral entrance pointing down. flower_orientation_mixed Flower orientation is mixed, with different flowers exhibiting different orientations. |
has broader | perianth morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
spatial pattern, distribution orientation position |
keyword |
reproduction petal corolla sepal calyx perianth |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 19/05/2023 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012421 |
Maximum flower number
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012422 |
alternative label | flower_count_maximum |
description |
A floral organ morphology trait [TO:0000862] which is the maximum [NCIT:C25564] count [NCIT:C25463] of flowers [PO:0009046] on an individual [EFO:0000542]. Maximum flower number produced. |
comments | |
value type | continuous variable |
unit | {count} |
minAllowedValue | 0 |
maxAllowedValue | 1e+06 |
has broader | floral organ morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
has number of count maximum |
keyword |
reproduction perianth corolla |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Flower number per plant [TRY:2999] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012422 |
Number of fertile stamens
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012431 |
alternative label | flower_fertile_stamens_count |
description |
A floral organ morphology trait [TO:0000862] which is the count [NCIT:C25463] of fertile [PATO:0000955] stamens [PO:0009029] on a hermaphrodite [PATO:0001340] flower [PO:0009046] or male [PATO:0000384] flower. Count of fertile stamens in bisexual or male flowers; does not score female flowers. |
comments | Definition derived from Schoenenberger et al. (2020) for their character ‘301. Number of fertile stamens (C1)’ |
value type | continuous variable |
unit | {count} |
minAllowedValue | 0 |
maxAllowedValue | 10000 |
has broader | androecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
has number of count |
keyword |
reproduction androecium stamen |
scope note | male or hermaphroditic flowers |
has exact match | stamen number |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012431 |
Filament presence and shape
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012432 |
alternative label | flower_filament |
description |
A floral organ morphology trait [TO:0000862] which is whether a filament [PO:0009067] is present [PATO:0000467] or absent [PATO:0000462], and if present, the shape [PATO:0000052] and the relative length [PATO:0000122], width [PATO:0000921], and thickness [PATO:0000915] of the filament. Trait that considers the absence or presence of the filament, and in the latter case, the shape of the filament. Shape is considered in terms of length and width and is defined in relation to anther length/width. |
comments | The width of the filament may thus either be broad as in laminar (e.g., Eupomatiaceae) or bulky stamens (e.g., Chloranthaceae), or narrow (filamentous) as found in many core eudicots groups (e.g., Rosaceae). This trait is considered inapplicable when filaments are entirely fused with each other or to the perianth. Definition and trait values derived from Schoenenberger et al. (2020) for their character ‘305. Filament (D1)’ |
value type | categorical variable |
has narrower |
flower_filament_absent No filaments present flower_filament_present_general Filaments present, with no specific defining characteristics. flower_filament_long_and_narrow Filaments have a long and narrow shape. (Synonyms, filiform, slender) flower_filament_short_and_narrow Filaments have a short and narrow shape; subsessile anthers. flower_filament_long_and_wide Filaments have a long and wide laminar shape. flower_filament_short_and_wide Filaments have a short and wide laminar shape. flower_filament_long_and_very_wide Filaments have a long and very wide shape; for instance, the petal-like (outer) stamens of Nymphaea. flower_filament_petaloid Filaments are long and wide and colorful, e.g. Canna. flower_filament_fused_into_synandrium Filament structure formed when stamens fused together. flower_filament_fused_into_fascicle_stalks Special case where the stamens are fused into the stalk of a fascicle of flowers. flower_filament_long_and_narrow_divided_in_two Filaments have a long and narrow shape that is divided in two; e.g. Adoxa. flower_filament_short_general Filament is short relative to the anther. |
has broader | androecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
shape structure |
keyword |
reproduction androecium stamen filament anther |
scope note | inapplicable when filaments are entirely fused with each other or to the perianth |
has exact match | |
has close match | filament 2-D shape |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012432 |
Fusion of filaments
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012433 |
alternative label | flower_filament_fusion |
description |
A floral organ morphology trait [TO:0000862] which is the proportion [PATO:0001470] of the length [PATO:0000122] of the stamen [PO:0009029] (or staminode [PO:0009077]) filaments [PO:0009067] that is fused [NCIT:C124537] together at anthesis [PO:0009068]. Fusion of stamen (and staminode) filaments among each other at anthesis (congenitally or postgenitally) is recorded on a continuous scale, from 0 (free filaments) to 1 (filaments fused along their entire length). |
comments | Partial fusion is recorded using an approximate number between these two extremes (e.g., 0.1 corresponds to basal fusion, 0.5 to fusion along half of the length of filaments). Definition derived from Schoenenberger et al. (2020) for their character ‘306. Fusion of filaments (C1)’ |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 0 |
maxAllowedValue | 1 |
has broader | androecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
dimensionless ratio ratio; proportion |
keyword |
reproduction androecium stamen filament connective staminode |
scope note | |
has exact match | |
has close match | |
has related match | filament attached to |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012433 |
Fusion of filaments to inner perianth series
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012434 |
alternative label | flower_filament_fusion_to_inner_perianth |
description |
A floral organ morphology trait [TO:0000862] which is the proportion [PATO:0001470] of the length [PATO:0000122] of the stamen [PO:0009029] (or staminode [PO:0009077]) filaments [PO:0009067] that are fused [NCIT:C124537] to the innermost perianth [PO:0009058] organ [PO:0009008] at anthesis [PO:0009068]. The fusion of filaments with the innermost perianth organs at anthesis on a continuous scale, from 0 (filaments completely free from perianth) to 1 (filaments fused along their entire length with the perianth; the ‘entire length’ of the filament is defined as the distance between the floral base and the joint between filament and anther). |
comments | Partial fusion is recorded using an approximate number between these two extremes (e.g., 0.1 corresponds to basal fusion, 0.5 to fusion along half of the length of perianth parts). If two (or more) stamen whorls (including staminodial whorls) differ in their extent of filament fusion with the perianth, this trait is recorded as a range of values. For example, if the filaments of an outermost stamen whorl are fused, up to 90% of their length, but an inner whorl only up to 50%, the trait is assigned a range of 0.5 to 0.9. The rationale for this is to provide a general trait that allows comparison of fusion among all angiosperms. Definition derived from Schoenenberger et al. (2020) for their character ‘308. Fusion of filaments to inner perianth series (C1)’ |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 0 |
maxAllowedValue | 1 |
has broader | androecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
dimensionless ratio ratio; proportion |
keyword |
reproduction androecium stamen filament connective staminode perianth |
scope note | |
has exact match | |
has close match | |
has related match | filament attached to |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012434 |
Gynoecium phyllotaxis
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012441 |
alternative label | flower_gynoecium_phyllotaxis |
description |
A gynoecium [PO:0009062] morphology trait which is either the count [NCIT:C25463] of whorls [PO:0025023] of carpels [PO:0009030] comprising the gynoecium or other descriptors of carpel phyllotaxy [TO:0006014]. Structural phyllotaxy of the gynoecium. |
comments | This trait is not applicable to unicarpellate flowers. Definition and trait values derived from Schoenenberger et al. (2020) for their character ‘400. Gynoecium phyllotaxy (D1)’ |
value type | categorical variable |
has narrower |
flower_gynoecium_phyllotaxis_one_whorl Flowers with a single whorl of carpels. flower_gynoecium_phyllotaxis_two_or_more_whorls Flowers with two or more whorls of carpels. flower_gynoecium_phyllotaxis_spiral Flowers with carpels in a spiral arrangement. |
has broader | gynoecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
spatial pattern, distribution orientation structure has number of count |
keyword |
reproduction gynoecium carpel whorl, floral whorl phyllotaxy |
scope note | Not applicable to unicarpellate flowers |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012441 |
Placentation
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012442 |
alternative label | flower_gynoecium_placentation |
description |
A floral organ morphology trait [TO:0000862] which is the position [PATO:0000140] of the ovules [PO:0020003] within the ovary [PO:0009072], known as placentation [APD:glossary/40074]. The different types of placentation in apocarpous/unicarpellate and in syncarpous gynoecia. |
comments | In apocarpous and unicarpellate gynoecia, placentation is often described as marginal as the ovules are usually attached along the ventral slit (i.e., the zone where the carpel margins become postgenitally closed during carpel development). In syncarpous gynoecia there are three main types of placentation, 1) axile placentation refers to ovaries where the ovules are placed in the angle between carpel flanks in the center of the ovary; 2) in ovaries with parietal placentation the ovules attach to the ovary wall where two carpels meet; 3) in ovaries with free-central placentation the ovules are attached to a central column that emerges from the base of the ovary and protrudes into the non-septate ovary. It is not unusual that syncarpous gynoecia show a transition from proximally axile to a distally parietal placentation (e.g., Polemoniaceae). Basal and apical placentation may occur both in apocarpous/unicarpellate and in syncarpous gynoecia. Usually there is one longitudinal series of ovules attached to each carpel margin. However, both in apocarpous/unicarpellate and in syncarpous gynoecia there may be more than one series of ovules at the flanks of a carpel. These latter cases are referred to as laminar (or laminar-diffuse) placentation (e.g., in some Nymphaeaceae). A placenta that is protruding from its surroundings and has more than two series of ovules (either axile or parietal) is called protruding-diffuse. Definition and trait values derived from Schoenenberger et al. (2020) for their character ‘412. Placentation (D1)’ |
value type | categorical variable |
has narrower |
flower_gynoecium_placentation_axile Ovules are placed in the angle between carpel flanks in the center of the ovary; in syncarpous gynoecia. flower_gynoecium_placentation_apical Ovules attach at the top of the ovary; pendulous; in syncarpous gynoecia and apocarpous and unicarpellate gynoecia. flower_gynoecium_placentation_basal Ovules attach at the base of the ovary; in syncarpous gynoecia and apocarpous and unicarpellate gynoecia. flower_gynoecium_placentation_parietal Ovules attach to the ovary wall where two carpels meet; in syncarpous gynoecia. flower_gynoecium_placentation_marginal Ovules attach along the ventral slit; in apocarpous and unicarpellate gynoecia. flower_gynoecium_placentation_free_central Ovules are attached to a central column that emerges from the base of the ovary and protrudes into the non-septate ovary; in syncarpous gynoecia. flower_gynoecium_placentation_laminar When there is more than one series of ovules at the flanks of a carpel; in syncarpous gynoecia and apocarpous and unicarpellate gynoecia. |
has broader | gynoecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
structure spatial pattern, distribution position |
keyword |
reproduction gynoecium carpel plant ovary placentation plant ovule |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012442 |
Fusion of ovaries
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012443 |
alternative label | flower_ovary_fusion |
description |
A floral organ morphology trait [TO:0000862] which, for flowers with multiple carpels, is the proportion [PATO:0001470] of the length [PATO:0000122] of the ovaries [PO:0009072] that are fused [NCIT:C124537] together. Degree of ovary fusion expressed as a fraction of the total length of the ovary (from the floral base to the apex of the ovary). |
comments | Fusion of styles and stigmas is not taken into account for this trait. Not applicable when there is a single carpel. Definition derived from Schoenenberger et al. (2020) for their character ‘403. Fusion of ovaries (C1)’ |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 0 |
maxAllowedValue | 1 |
has broader | gynoecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
dimensionless ratio ratio; proportion structure |
keyword |
reproduction gynoecium carpel plant ovary |
scope note | Not applicable when there is a single carpel. |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012443 |
Ovary position
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012444 |
alternative label | flower_ovary_position |
description |
A floral organ morphology trait [TO:0000862] which is the position [PATO:0000140] of the plant ovary [PO:0009072] relative to the other flower [PO:0009046] organs [PO:0009008], in particular whether the ovary is attached above or below the perianth [PO:0009058] organs (the petals [PO:0009032] and sepals [PO:0009031]). The position of the flower ovary relative to the insertion level of the remaining floral organs. |
comments | The ovary is the part of the gynoecium where the ovules are produced. The ovary may be located on the receptacle and thus be positioned above the insertion level of the remaining floral organs (i.e., the ovary is superior and the flower is hypogynous). Alternatively, the ovary may be embedded in the receptacle and therefore be located below the insertion level of the remaining floral organs (i.e., the ovary is inferior and the flower is epigynous). Flowers with a hypanthium may either have a superior ovary (perigyny; e.g., many Rosaceae) or an inferior ovary (epiperigyny). It is also possible that the ovary is inferior to a certain degree only, such as half-inferior, if the receptacle is surrounding the ovary to its mid-level. Definition and trait values derived from Schoenenberger et al. (2020) for their character ‘102. Ovary position (D1)’ |
value type | categorical variable |
has narrower |
flower_ovary_position_inferior Flower with inferior ovary, where the ovary is embedded in the receptacle and therefore located below the insertion level of the remaining floral organs. flower_ovary_position_superior Flower with superior ovary, where the ovary is positioned above the insertion level of the remaining floral organs. flower_ovary_position_half_inferior Flower where the receptacle is surrounded by the ovary to its mid-level. flower_ovary_position_one_quarter_inferior Flower where the receptacle surrounds up to one quarter of the ovary. flower_ovary_position_three_quarters_inferior Flower where the receptacle surrounds more than three quarters of the ovary. |
has broader | gynoecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
spatial pattern, distribution orientation position |
keyword |
reproduction gynoecium carpel plant ovary perianth |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012444 |
Number of ovules per functional carpel
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012445 |
alternative label | flower_ovules_per_functional_carpel_count |
description |
A floral organ morphology trait [TO:0000862] which is the count [NCIT:C25463] of ovules [PO:0020003] per fertile [PATO:0000955] carpel [PO:0009030]. Number of ovules per carpel recorded as a continuous character (with integer values of 1 and above). |
comments | Reduced (sterile) carpels are not taken into account here. Definition derived from Schoenenberger et al. (2020) for their character ‘411. Number of ovules per functional carpel (C1)’ |
value type | continuous variable |
unit | {count} |
minAllowedValue | 0 |
maxAllowedValue | 1e+05 |
has broader | gynoecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
has number of count |
keyword |
reproduction gynoecium carpel plant ovary plant ovule |
scope note | Only applicable to fertile carpels. |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012445 |
Perianth differentiation
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012461 |
alternative label | flower_perianth_differentiation |
description |
A floral organ morphology trait [TO:0000862] which indicates whether petals [PO:0009032] and sepals [PO:0009031] are differentiated or identical and the various ways they can be identical or different. The ways in which perianth organs may look different from each other in a given flower. |
comments | Typically, outer perianth parts are sepaloid and protect the other floral organs during floral development, while inner organs are often petaloid and play a role in pollinator attraction (Endress, 1994). However, it is also possible that all parts are either sepaloid or petaloid but remain differentiated in shape, size, and/or texture. In case of spiral perianths, differentiation may be continuous (i.e., gradual), whereby two successively initiated organs are very similar or only slightly different, while the outermost and innermost organs at both ends of the spiral are very different from each other (e.g., Chimonanthus). In the special case of perianths consisting of a single whorl, they are scored as undifferentiated. This perianth differentiation trait may be seen as both functional (the parting vs. sharing of functions among perianth parts) and developmental (the expression of a genetic program for different forms of perianth parts vs. a single program for a single type of perianth part morphology). Within-whorl differentiation, whereby organs of the same whorl take different forms, is common in zygomorphic flowers (e.g., Balsaminaceae, Fabaceae, Orchidaceae) but is not taken into account with this trait. This trait is not applicable when the perianth is absent. Definition and trait values derived from Schoenenberger et al. (2020) for their character ‘234. Perianth differentiation (D1)’ |
value type | categorical variable |
has narrower |
flower_perianth_differentiation_undifferentiated Flower were all tepals are alike, including flowers with a single, undifferentiated whorl. flower_perianth_differentiation_marked_differentiation_outer_sepaloid_inner_petaloid A typical flower with a distinct calyx and corolla. flower_perianth_differentiation_marked_differentiation_among_petaloid_tepals A flower with tepals that all resemble petals, but with marked differentiation between whorls of tepals. flower_perianth_differentiation_marked_differentiation_among_sepaloid_tepals A flower with tepals that all resemble sepals, but with marked differentiation between whorls of tepals. flower_perianth_differentiation_marked_differentiation A flower with marked differentiation between whorls, but without an indication if the perianth whorls are petals, sepals, or tepals. flower_perianth_differentiation_continuous_differentiation_outer_sepaloid_inner_petaloid A flower with multiple whorls, where there is continuous differentiation between the outer sepaloid parts and the inner petaloid parts. flower_perianth_differentiation_continuous_differentiation_among_petaloid_tepals A flower with series of tepals that all resemble petals, which display continuous, gradual differentiation between whorls. flower_perianth_differentiation_continuous_differentiation_among_sepaloid_tepals A flower with series of tepals that all resemble sepals, which display continuous, gradual differentiation between whorls. flower_perianth_differentiation_weak_differentiation A flower with weak between whorls, but without an indication if the perianth whorls are petals, sepals, or tepals. flower_perianth_differentiation_very_weak_differentiation A flower with very weak between whorls, but without an indication if the perianth whorls are petals, sepals, or tepals. |
has broader | perianth morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
structure shape |
keyword |
reproduction perianth sepal petal corolla calyx |
scope note | Not applicable when the perianth is absent |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012461 |
Fusion of perianth
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012462 |
alternative label | flower_perianth_fusion |
description |
A floral organ morphology trait [TO:0000862] which is the proportion [PATO:0001470] of the length [PATO:0000122] of perianth [PO:0009058] parts (sepals [PO:0009031], petals [PO:0009032], and tepals [PO:0009033]) that are fused [NCIT:C124537] together at anthesis [PO:0009068]. Fusion of perianth organs (congenital or postgenital) at anthesis, recorded on a continuous scale, from 0 (free parts) to 1 (parts fused along their entire length). |
comments | Partial fusion was recorded using an approximate number between these two extremes (e.g., 0.1 corresponds to basal fusion, 0.5 to fusion along half of the length of perianth parts). In case of multiple whorls, this trait records within-whorl fusion. For example, if organs within each whorl are fused along their entire length, a trait value of 1 is recorded. In cases where organs of two whorls are fused into a common tubular structure, such as frequently observed in monocots (e.g., Polygonatum), the perianth is considered to be fused. If the two (or more) whorls differed in their extent of fusion, a range of trait values may be recorded. For example, if the calyx is only basally fused, up to 10% of its length, but the corolla is entirely fused, a range of 0.1 to 1 is recorded as the trait value for the species. Definition derived from Schoenenberger et al. (2020) for their character ‘204. Fusion of perianth (C1)’ |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 0 |
maxAllowedValue | 1 |
has broader | perianth morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
dimensionless ratio ratio; proportion structure |
keyword |
reproduction perianth sepal petal corolla calyx |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012462 |
Number of perianth parts in each whorl (Perianth merism)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012463 |
alternative label | flower_perianth_merism |
description |
A perianth morphology trait [TO:0000275] which is the count [NCIT:C25463] of perianth [PO:0009058] parts (sepals [PO:0009031], petals [PO:0009032], and tepals [PO:0009033]) in each floral whorl [PO:0025023]. The number of perianth parts in each whorl, recorded as a continuous trait (with integer values of 1 and above). |
comments | Not applicable when perianth phyllotaxis is spiral or irregular or when the perianth is absent. Definition derived from Schoenenberger et al. (2020) for their character ‘232. Perianth merism (C1)’ |
value type | continuous variable |
unit | {count} |
minAllowedValue | 0 |
maxAllowedValue | 50 |
has broader | perianth morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
has number of count orientation |
keyword |
reproduction perianth sepal petal corolla calyx merism whorl, floral whorl |
scope note | Not applicable when perianth phyllotaxis is spiral or irregular or when the perianth is absent. |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012463 |
Number of perianth parts
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012464 |
alternative label | flower_perianth_parts_count |
description |
A perianth morphology trait [TO:0000275] which is the total count [NCIT:C25463] of perianth [PO:0009058] parts, including sepals [PO:0009031], petals [PO:0009032], and any form of tepal [PO:0009033]. The total number of perianth parts, including sepals, petals, or any form of tepal. |
comments | A value of zero was scored when the perianth is absent. In flowers with perianth whorls fused along their complete length (e.g., Convolvulus), perianth parts are counted based on merism (e.g., if a calyx has 5 distinct sepals and the corolla is entirely fused, then the corolla is often interpreted to consist of five fused petals), anatomy (e.g., number of vascular traces), development (e.g., number of primordia), or comparison with closely related taxa. Definition derived from Schoenenberger et al. (2020) for their character ‘201. Number of perianth parts (C1)’ |
value type | continuous variable |
unit | {count} |
minAllowedValue | 0 |
maxAllowedValue | 1000 |
has broader | perianth morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
has number of count |
keyword |
reproduction perianth sepal petal corolla calyx |
scope note | |
has exact match | tepal number |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012464 |
Perianth phyllotaxis
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012465 |
alternative label | flower_perianth_phyllotaxis |
description |
A perianth morphology trait [TO:0000275] which is the phyllotaxy [TO:0006014] of the perianth [PO:0009058] parts (petals [PO:0009032], sepals [PO:0009031], and tepals [PO:0009033]), at anthesis [PO:0009068] Perianth phyllotaxis at anthesis. |
comments | Perianth parts may be organised in one or more whorls or along a continuous spiral, usually with wide divergence angles more or less equal to 137.5 degrees. Less frequently, perianth phyllotaxis may be irregular. Perianth phyllotaxis at anthesis may differ from phyllotaxis of perianth part primordia at their inception and it is not uncommon that spirally initiated perianths become whorled later through development. Definition and trait values derived from Schoenenberger et al. (2020) for their character ‘230. Perianth phyllotaxy (D1)’, with more information of differentiating between trait values in this manuscript. |
value type | categorical variable |
has narrower |
flower_perianth_phyllotaxis_irregular Perianth parts lacking any symmetrical organisation. flower_perianth_phyllotaxis_spiral Perianth parts organised along a continuous spiral, usually with wide divergence angles more or less equal to 137.5 degrees, the Fibonacci ‘golden angle’. flower_perianth_phyllotaxis_whorled Perianth parts organised in one or more whorls. |
has broader | perianth morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
spatial pattern, distribution orientation |
keyword |
reproduction perianth sepal petal corolla calyx whorl, floral whorl phyllotaxy |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012465 |
Symmetry of perianth
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012466 |
alternative label | flower_perianth_symmetry |
description |
A perianth morphology trait [TO:0000275] which is the symmetry [PATO:0000965] of the perianth [PO:0009058] (petals [PO:0009032], sepals [PO:0009031], and tepals [PO:0009033]), whereby a perianth is only considered actinomorphic [PATO:0001328] if all perianth whorls [PO:0025023] are actinomorphic. Trait capturing the symmetry of the perianth. |
comments | This trait is applied to the perianth as a whole. In case of flowers with two or more perianth whorls, species are considered actinomorphic if all whorls are actinomorphic and as zygomorphic if one or more whorls are zygomorphic. Trait is not applicable when the perianth is missing. Definition and trait values derived from Schoenenberger et al. (2020) for their character ‘207. Symmetry of perianth (D1)’ |
value type | categorical variable |
has narrower |
flower_perianth_symmetry_actinomorphic_general Perianth displaying radial symmetry. flower_perianth_symmetry_actinomorphic_rotational Perianth that can be equally divided into three or more identical sections that, when rotated around the center of the flower by some number of degrees, exactly match each other in orientation and shape. flower_perianth_symmetry_actinomorphic_strictly_polysymmetric Polysymmetry, with three or more planes of bilateral symmetry. flower_perianth_symmetry_actinomorphic_spiral Perianth lacking a distinct plane of symmetry because their perianth parts are spirally arranged. flower_perianth_symmetry_asymmetric Perianth lacking any planes of symmetry. flower_perianth_symmetry_disymmetric Perianth with two orthogonal planes of bilateral symmetry. flower_perianth_symmetry_zygomorphic Monosymmetric, with a single plane of bilateral symmetry. |
has broader | perianth morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
spatial pattern, distribution symmetry orientation |
keyword |
reproduction perianth sepal petal corolla calyx whorl, floral whorl |
scope note | Not applicable when the perianth is missing |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012466 |
Number of perianth whorls
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012467 |
alternative label | flower_perianth_whorls_count |
description |
A perianth morphology trait [TO:0000275] which is the count [NCIT:C25463] of floral whorls [PO:0025023] that comprise the perianth [PO:0009058] (petals [PO:0009032], sepals [PO:0009031], and tepals [PO:0009033]). The number of perianth whorls as a continuous trait (with integer values of 1 and above). |
comments | Not applicable when perianth phyllotaxis is spiral or irregular or when the perianth is absent. Definition derived from Schoenenberger et al. (2020) for their character ‘231. Number of perianth whorls (C1)’ |
value type | continuous variable |
unit | {count} |
minAllowedValue | 0 |
maxAllowedValue | 15 |
has broader | perianth morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
has number of count |
keyword |
reproduction perianth sepal petal corolla calyx whorl, floral whorl |
scope note | Not applicable when perianth phyllotaxis is spiral or irregular or when the perianth is absent. |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012467 |
Pollen grain aperture shape
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012471 |
alternative label | flower_pollen_aperture_shape |
description |
A floral organ morphology trait [TO:0000862] which is the shape [PATO:0000052], structure [PATO:0000141], and position [PATO:0000140] of the pollen grain [PO:0025281] apertures [GO:0062074]. Pollen grains are often described according to the shape, structure, and position of their apertures. This trait describes the main shape of the many described aperture types. |
comments | Aperture terminology is partly determined by the position of the aperture on the pollen grain (either at the pole or at the equator) and pollen grain polarity, in turn, is determined by the spatial orientation of the microspore in the meiotic tetrad. Definition and trait values derived from Schoenenberger et al. (2020) for their character ‘5002. Aperture shape (D1)’’ |
value type | categorical variable |
has narrower |
flower_pollen_aperture_shape_absent Pollen that lacks an aperture. flower_pollen_aperture_shape_colporus Pollen aperture shape that combines the groove of colpate and the pore of porate apertures. flower_pollen_aperture_shape_colpus Pollen aperture shape is elongate and grooved and may be positioned globally or equatorially. flower_pollen_aperture_shape_pore Pollen aperture shape is round and pore-like and may be positioned globally or equatorially. flower_pollen_aperture_shape_ring_like Aperture that completely encircles the pollen. flower_pollen_aperture_shape_spiraperturate Pollen grain with one or more spiral apertures. flower_pollen_aperture_shape_sulcus Pollen aperture shape is elongate and grooved and positioned at the pole. flower_pollen_aperture_shape_syncolpus Pollen grain with two or more simple (or compound) colpi, the ends of which join at the pole. flower_pollen_aperture_shape_ulcus Pollen aperture shape is round and pore-like and positioned at the pole. |
has broader | androecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
shape structure position spatial pattern, distribution |
keyword |
reproduction androecium stamen anther pollen aperture pollen pollen tube anther theca |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012471 |
Number of pollen grain apertures
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012472 |
alternative label | flower_pollen_apertures_count |
description |
A floral organ morphology trait [TO:0000862] which is the count [NCIT:C25463] of pollen apertures [GO:0062074] per pollen [PO:0025281] grain. The number of apertures per pollen grain as a continuous character. |
comments | A pollen aperture is a structurally delimited region of the pollen grain wall through which the pollen tube emerges during pollen germination and which plays a role in harmomegathy. A value of zero is scored when pollen is inaperturate (i.e. when there is no distinct aperture). Aperturate pollen is scored with integer values of 1 and above. Definition derived from Schoenenberger et al. (2020) for their character ‘5000. Number of apertures (C1)’ |
value type | continuous variable |
unit | {count} |
minAllowedValue | 0 |
maxAllowedValue | 100 |
has broader | androecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
has number of count |
keyword |
reproduction androecium stamen anther pollen aperture pollen pollen tube anther theca |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012472 |
Pollen grain length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012473 |
alternative label | flower_pollen_length |
description |
A floral organ morphology trait [TO:0000862] which is the length [PATO:0000122] of a pollen [PO:0025281] grain. The largest dimension of the pollen grain. |
comments | Palynologists typically describe pollen dimensions (and shape) using two measures, the polar axis (P) and the total breadth or diameter of the equatorial axis. Here we use P or E or another measure, whichever is the longest. |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 0 |
maxAllowedValue | 1000 |
has broader | androecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic | length |
keyword |
reproduction pollen |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 19/05/2023 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012473 |
Number of structural carpels
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012481 |
alternative label | flower_structural_carpels_count |
description |
A floral organ morphology trait [TO:0000862] which is the count [NCIT:C25463] of both fertile [PATO:0000955] and female sterile [PATO:0000892] carpels [PO:0009030] in a hermaphrodite [PATO:0001340] flower [PO:0009046] or female [PATO:0000383] flower. Number of fertile or sterile carpels in bisexual or female flowers, recorded as a continuous character (with integer values of 1 and above). |
comments | Includes the number of co-occurring carpellodes (sterile carpels) because this number is often more easily obtained from the literature than the actual number of fertile carpels. However, the number of carpellodes in male flowers is ignored for this character. In multicarpellate, unilocular gynoecia with complete carpel fusion up to the stigma (e.g., Primula), it may be difficult to assess the number of carpels unequivocally. In such cases, the number of carpels is scored only if it is well established based on atomical or developmental investigations. Similarly, in gynoecia where one or more carpels are reduced (e.g., in the pseudomonomerous gynoecia of some Arecaceae, Stauffer et al., 2002), the total number of structural carpels is only scored when unequivocally determined in the literature. Definition derived from Schoenenberger et al. (2020) for their character ‘401. Number of structural carpels (C1)’ |
value type | continuous variable |
unit | {count} |
minAllowedValue | 0 |
maxAllowedValue | 10000 |
has broader | gynoecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
has number of count |
keyword |
reproduction gynoecium carpel |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012481 |
Floral structural sex
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012482 |
alternative label | flower_structural_sex_type |
description |
A floral organ morphology trait [TO:0000862] which is the phenotypic sex [PATO:0001894] of a flower [PO:0009046], indicating whether individual flowers have both male [PATO:0000384] and female [PATO:0000383] reproductive structures [UBERON:0005156] (bisexual) or only one type of reproductive organ (unisexual). Trait that captures floral sex, distinguishing among three states, bisexual, incompletely unisexual, and unisexual. |
comments | Defined by Schoenenberger et al. (2020) for their character ‘100. Floral structural sex (D1)’. See the trait ‘sex_type’ for plant sex type. |
value type | categorical variable |
has narrower |
flower_structural_sex_type_bisexual Hermaphrodite; flowers with both male and female reproductive organs. flower_structural_sex_type_incompletely_unisexual Male flowers with pistillodes and/or female flowers with staminodes. flower_structural_sex_type_unisexual Flowers with either male or female reproductive organs. |
has broader | floral organ morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
structure organismal quality |
keyword |
reproduction phenotypic sex perianth corolla hermaphrodite |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012482 |
Style differentiation
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012483 |
alternative label | flower_style_differentiation |
description |
A floral organ morphology trait [TO:0000862] which is whether a style [PO:0006469] is present [PATO:0000467] or absent [PATO:0000462], and if present, the shape [PATO:0000052] and the length [PATO:0000122], width [PATO:0000921], and thickness [PATO:0000915] of the style relative to the dimensions of the ovary [PO:0009072]. Presence or absence of a style, and, when present, the shape of the style in terms of length and width in relation to ovary length and width. |
comments | This trait does not distinguish between fused or free styles. Definition and trait values derived from Schoenenberger et al. (2020) for their character ‘404. Style differentiation (D1)’ |
value type | categorical variable |
has narrower |
flower_style_differentiation_absent Stigma sessile. flower_style_differentiation_present_length_and_shape_unknown Style present but shape unknown. flower_style_differentiation_present_short_and_thick Style present, and short and thick. flower_style_differentiation_present_short_and_narrow Style present, and short and narrow, including short filiform styles. flower_style_differentiation_present_long_and_wide Style present, and long and wide. flower_style_differentiation_present_long_and_narrow Style present, and long and narrow, including long filiform styles. flower_style_differentiation_present_petaloid Style present and petaloid. flower_style_differentiation_continuous When the style is an apical extension of carpel with decurrent stigma. |
has broader | gynoecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
shape amount (presence or absence in organism 2-D extent structure |
keyword |
reproduction gynoecium style plant ovary carpel |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012483 |
Fusion of styles
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012484 |
alternative label | flower_style_fusion |
description |
A floral organ morphology trait [TO:0000862] which is the proportion [PATO:0001470] of the length [PATO:0000122] of styles [PO:0006469] that are fused [NCIT:C124537] together. The degree of fusion of styles at anthesis, recorded on a continuous scale, from 0 (free styles) to 1 (styles fused along their entire length, but excluding the stigmatic region). |
comments | Partial fusion is recorded using an approximate number between these two extremes (e.g., 0.1 corresponds to basal fusion, 0.5 to fusion along half of the total length of the styles). This character is not applicable in unicarpellate flowers. Definition derived from Schoenenberger et al. (2020) for their character ‘406. Fusion of styles (C1)’ |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 0 |
maxAllowedValue | 1 |
has broader | gynoecium morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
dimensionless ratio ratio; proportion structure |
keyword |
reproduction gynoecium style carpel |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Schönenberger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 24/05/2023 |
reviewed by | Hervé Sauquet |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012484 |
Petal length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012485 |
alternative label | flower_petal_length |
description |
A floral organ morphology trait [TO:0000862] which is the length [PATO:0000122] of a petal [PO_0009032]. The length of an individual flower petal. |
comments | |
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 1 |
maxAllowedValue | 100 |
has broader | perianth morphology trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
length size |
keyword |
reproduction petal corolla perianth petal morphology trait |
scope note | applicable to flowering plants |
has exact match | petal length |
has close match | |
has related match | |
examples | exact match: Flower petal length [TRY:3576] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012485 |
Fruit dry mass
Fruit length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012512 |
alternative label | fruit_length |
description |
A fruit morphology trait [TO:0002629] which is the length [PATO:0000122] of a fresh [EnvThes:21976] fruit [PO:0009001] from the fruit proximal end [PO:0008002] (base) to the fruit distal end [PO:0008001] (apex). Linear dimension from the base to the apex of a fresh fruit, even if this is not the longest dimension. |
comments | |
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 2000 |
has broader | fruit morphology trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic |
length size |
keyword | reproduction |
scope note | |
has exact match | fruit length |
has close match | |
has related match | |
examples |
exact match: Fruit length [TOP92] (https://top-thesaurus.org/index) exact match: Fruit length [TRY:918] (https://www.try-db.org/de/de.php) exact match: Fruit length [GIFT:3.13] (https://gift.uni-goettingen.de) close match: maximum fruit length [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) close match: minimum fruit length [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: AverageFruitLength_cm [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) exact match: MinFruitLength_cm [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) exact match: MaxFruitLength_cm [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) |
references |
Pérez-Harguindeguy 2013 Kew Seed Information Database 2022 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012512 |
Fruit width
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012513 |
alternative label | fruit_width |
description |
A fruit morphology trait [TO:0002629] which is the width [PATO:0000921] of a fresh [EnvThes:21976] fruit [PO:0009001], where width is the greatest linear dimension [PATO:0001708] perpendicular to [PATO:0002434] to the fruit length [PATO:0000122] and fruit height [PATO:0000119]. Greatest linear width dimension of a fresh fruit, sometimes referred to as ‘diameter’ in fruits where the width and height are identical; orthogonal to the fruit length, the base-to-apex dimension. |
comments | |
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 2000 |
has broader | fruit morphology trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic |
width size |
keyword | reproduction |
scope note | |
has exact match | fruit width |
has close match | |
has related match | |
examples |
exact match: Fruit width [TOP96] (https://top-thesaurus.org/index) exact match: Fruit width (diameter) [TRY:917] (https://www.try-db.org/de/de.php) exact match: Fruit width [GIFT:3.14] (https://gift.uni-goettingen.de) exact match: AverageFruitWidth_cm [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) exact match: MinFruitWidth_cm [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) exact match: MaxFruitWidth_cm [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) |
references |
Pérez-Harguindeguy 2013 Kew Seed Information Database 2022 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012513 |
Fruit breadth
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012514 |
alternative label | fruit_height |
description |
A fruit morphology trait [TO:0002629] which is the height [PATO:0000119] of a fresh [EnvThes:21976] fruit [PO:0009001], where height is the shorter linear width dimension [PATO:0001708] perpendicular to [PATO:0002434] both the fruit length [PATO:0000122] and fruit width [PATO:0000921]. Shorter linear width dimension of a fresh fruit and generally not reported in fruits where the width and height are identical; orthogonal to the length, the base-to-apex dimension. |
comments | |
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 2000 |
has broader | fruit morphology trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic |
height size |
keyword | reproduction |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Fruit thickness [TOP100] (https://top-thesaurus.org/index) exact match: Fruit height [GIFT:3.15] (https://gift.uni-goettingen.de) |
references |
Pérez-Harguindeguy 2013 Kew Seed Information Database 2022 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | fruit_breadth |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012514 |
Fruit wall thickness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012515 |
alternative label | fruit_wall_thickness |
description |
A fruit morphology trait [TO:0002629] which is the thickness [PATO:0000915] of the entire pericarp [PO:0009084] (the exocarp [PO:0009085], mesocarp [PO:0009087], and endocarp [PO:0009086] combined), although it often refers just to the fleshy [PATO:0002351] components of the pericarp (most frequently the exocarp and mesocarp). Fruit wall thickness of a mature fresh fruit. This term sometimes applies explicitly to the entire pericarp (exocarp + mesocarp + endocarp), but more frequently will have a functional meaning, referring to the outer fleshy layer which might be just some components of the peripcarp (most frequently the exocarp and mesocarp). |
comments | |
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 1000 |
has broader | fruit morphology trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic | thickness |
keyword |
reproduction pericarp exocarp mesocarp endocarp |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Simpson 2019 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | fruit_wall_width |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012515 |
Fruit type
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012516 |
alternative label | fruit_type |
description |
A fruit morphology trait [TO:0002629] which is the botanical classification [NCIT:C25161] or type [NCIT:C25284] of a fruit [PO:0009001]. Botanical fruit type classification. |
comments |
Although this trait is explicitly for fruit types, it includes a single term strobilus to describe the ‘fruiting body’ of non-flowering plants.
|
value type | categorical variable |
has narrower |
fruit_type_achene A simple, dry, indehiscent fruit with a single seed that is attached to the pericarp at one point only. (Synonyms, cypsela) fruit_type_anthocarp A ripened ovary surrounded by attached accessory floral tissues; the floral tissues may be fleshy or dry. (Synonyms, accessory_fruit, pseudocarp, diclesium) fruit_type_berry A simple, indehiscent fruit with one to many seeds embedded in a fleshy pericarp. fruit_type_capsule A dry, dehiscent fruit composed of two or more united carpels; different types of capsules distinguished by type of dehiscence (e.g. valves, slits, pores). fruit_type_caryopsis A simple, dry, indehiscent fruit with a single seed which is fused to the pericarp at one point only; the fruit type of all Poaceae (Synonyms, grain) fruit_type_compound_fruit_other A fruit derived from more than one flower. (Synonyms, aggregate_fruit) fruit_type_drupe A simple indehiscent fruit with a hard, stony endocarp and a fleshy mesocarp. fruit_type_follicle A dry, dehiscent fruit derived from a single carpel that splits along one suture. fruit_type_legume A dry, dehiscent fruit derived from a single carpel that splits along two sutures; applies to Fabaceae. (Synonyms, pod) fruit_type_legume_indehiscent A dry, indehiscent fruit derived from a single carpel; applies to Fabaceae. fruit_type_mericarp A fruitlet (seed-containing portion of a fruit) that is a half-carpel; the individual fruitlets separate from one another at maturity; a specific type of schizocarp. (In some datasets, term likely refers to any fruitlet derived from a portion of a schizocarp that separates at maturity, not explicitly just a half-carpel.) fruit_type_multiple_fruit A fruit composed of several fruitlets developing from a single flower (e.g. raspberries, magnolias); fruits developing from more than one flower are included under compound (aggregate) fruits. (Synonym, apocarp) fruit_type_nut A simple, dry, indehiscent fruit with a single seed and a hard pericarp. fruit_type_nutlet A diminutive of nut, referring to a simple, dry, indehiscent structure with a single seed that might be an entire fruit (nut; monocarp) or a portion of a fruit, such as the individual components derived from an apocarp (fruit with multiple unfused ovaries) or schizocarp (fruit with multiple ovaries that separate at maturity). fruit_type_pepo A fleshy fruit derived from a single ovary that is divided into several carpels, has multiple seeds, and has a tough rind when mature. fruit_type_pome A fleshy fruit with the bulk of the fleshy tissue derived from flora tissue that surrounds the inferior ovary. fruit_type_pyrene A fleshy fruit in which the seed(s) are covered by a hard layer of endocarp. fruit_type_samara A winged, dry fruit. fruit_type_schizocarp Category that includes all fruits derived from a compound pistil that separate into individual carpellary constituents at maturity; broad terms that includes dry and fleshy fruits, some with accessory tissues, others without. The individual seed-containing units that a schizocarp breaks apart into include mericarps, nutlets, and fruitlets. fruit_type_silique A type of capsule (dry, dehiscent fruit) where the fruit is divided into two parts by a thin partition; more than three times as long as wide; applies to Brassicaceae (Synonyms, silicle, siliqua) fruit_type_strobilus A modified reproductive shoot system found in many nonflowering plants, especially gymnosperms, comprised of overlapping bracts (scales). (Synonyms, cone) fruit_type_syncarp A compound fruit produced by the adhesion of the fruits from several flowers. fruit_type_syconium A fleshy compound fruit, in which the fruitlets are enclosed in accessory material, such as the hollow-centered fruits of Moraceae. (Synonyms, synconium, fig) fruit_type_utricle A bladdery or inflated dry fruit with a single seed; essential an achene in which the pericarp is significantly larger than the mature seed. |
has broader | fruit morphology trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic |
structure composition shape |
keyword | reproduction |
scope note | |
has exact match | fruit type |
has close match | |
has related match | |
examples |
exact match: Fruit type [TRY:99] (https://www.try-db.org/de/de.php) exact match: Fruit_type_1 [GIFT:3.16.1] (https://gift.uni-goettingen.de) exact match: fruit type [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Fruit type [BROT:26] (http://doi.org/10.1038/sdata.2018.135) |
references |
Kew Seed Information Database 2022 Beentje 2010 Spjut 2003 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012516 |
Fruit fleshiness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012517 |
alternative label | fruit_fleshiness |
description |
A fruit morphology trait [TO:0002629] which indicates whether a mature [PATO:0001701] fresh [EnvThes:21976] fruit [PO:0009001] is fleshy [PATO:0002351]. Binary variable, dividing entire, true fruits into ‘dry’ versus ‘fleshy’ based on whether their botanical fruit type is fleshy when mature and fresh. |
comments | This trait explicitly refers to fruit fleshiness, not diaspore or seed fleshiness; diaspore fleshiness is a separate trait. |
value type | categorical variable |
has narrower |
fruit_fleshiness_dry Fruits are dry when mature and fresh. fruit_fleshiness_fleshy Fruits are fleshy when mature and fresh. |
has broader | fruit morphology trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic |
composition structure texture |
keyword |
reproduction fleshy |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
close match: Fruit type [TRY:99] (https://www.try-db.org/de/de.php) exact match: Fruit_dryness_1 [GIFT:3.18.1] (https://gift.uni-goettingen.de) |
references |
Kew Seed Information Database 2022 Beentje 2010 Spjut 2003 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012517 |
Fruit dehiscence
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012518 |
alternative label | fruit_dehiscence |
description |
A fruit morphology trait [TO:0002629] which indicates whether mature [PATO:0001701] fruits [PO:0009001] are dehiscent [GO:0009900]. Binary variable, dividing fruits into ‘dehiscent’ versus ‘indehiscent’ based on whether the individual fruit units are dehiscent when mature. |
comments | |
value type | categorical variable |
has narrower |
fruit_dehiscence_dehiscent Fruits are dehiscent when mature. fruit_dehiscence_indehiscent Fruits are indehiscent when mature. |
has broader | fruit morphology trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic | structure |
keyword |
reproduction dehiscence |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
close match: Fruit type [TRY:99] (https://www.try-db.org/de/de.php) exact match: Dehiscence_1 [GIFT:3.17.1] (https://gift.uni-goettingen.de) |
references |
Kew Seed Information Database 2022 Beentje 2010 Spjut 2003 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012518 |
Fruit colour
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012519 |
alternative label | fruit_colour |
description |
A fruit morphology trait [TO:0002629] which is the primary [NCIT:C25251] colour [PATO:0000014] of the exocarp [PO:0009085] of a mature [PATO:0001701] fruit [PO:0009001]. Human visible dominant colour of a fresh fruit’s exocarp (outermost layer) at maturity. |
comments | If a fruit is multiple colours, they are listed as a space-delimited string. |
value type | categorical variable |
has narrower |
fruit_colour_pink Fruit’s exocarp is pink. fruit_colour_red Fruit’s exocarp is red. fruit_colour_orange Fruit’s exocarp is orange. fruit_colour_yellow Fruit’s exocarp is yellow. fruit_colour_green Fruit’s exocarp is green. fruit_colour_blue Fruit’s exocarp is blue. fruit_colour_purple Fruit’s exocarp is purple. fruit_colour_white Fruit’s exocarp is white. fruit_colour_cream Fruit’s exocarp is cream. fruit_colour_brown Fruit’s exocarp is brown. fruit_colour_black Fruit’s exocarp is black. fruit_colour_grey Fruit’s exocarp is grey. |
has broader | fruit morphology trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic | colour / color |
keyword |
reproduction exocarp pericarp |
scope note | |
has exact match |
fruit color exocarp color |
has close match | |
has related match | |
examples |
exact match: Fruit/seed color [TRY:585] (https://www.try-db.org/de/de.php) close match: Dispersal unit color [TRY:392] (https://www.try-db.org/de/de.php) exact match: Fruit_colour [GIFT:3.22.1] (https://gift.uni-goettingen.de) exact match: MainFruitColors [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) close match: FruitColorDescription [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) |
references |
Kissling 2019 Delmas 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012519 |
Fruit surface hairiness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012521 |
alternative label | fruit_surface_hairs |
description |
A fruit morphology trait [TO:0002629] which is the presence or absence of trichomes [PO:0006504] (hairs) on the surface (exocarp [PO:0009085]) of a mature [PATO:0001701] fruit [PO:0009001]. Surface hairiness of a mature fruit, including vestiture (trichome cover) and bristles. |
comments | |
value type | categorical variable |
has narrower |
fruit_surface_hairs_glabrous Mature fruit do not have hairs (trichomes). fruit_surface_hairs_hairy Mature fruit have hairs (trichomes). |
has broader | fruit morphology trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic |
texture pilosity |
keyword |
trichome fruit morphology trait |
scope note | |
has exact match | fruit hairiness |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012521 |
Seed dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012610 |
alternative label | seed_dry_mass |
description |
A seed morphology trait [TO:0000184] which is the dry [PATO:0001824] mass [PATO:0000125] of a mature [PATO:0001701] seed [PO:0009010]. Dry mass of a mature seed, including both oven dried and air-dried samples. |
comments | Standard methods people will have used to dry seeds include, ‘fresh’ (at dispersal, mature); ‘air dried’ (at local ambient conditions); ‘seed bank air dried’ (to 15% relative humidity); and ‘oven dried’ (>100 deg C for a set number of hours; e.g. seed bank standard is 103 deg C for 17 hours). It is expected that some observations in AusTraits mapped onto ‘seed_dry_mass’ will actually include both the seed and some dispersal tissue, if the two cannot easily be separated; these should be mapped to ‘diaspore_dry_mass’. |
value type | continuous variable |
unit |
mg milligram |
minAllowedValue | 1e-05 |
maxAllowedValue | 1e+06 |
has broader | seed morphology trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic | mass |
keyword | reproduction |
scope note | |
has exact match |
seed weight, seed mass seed mass |
has close match | |
has related match | |
examples |
exact match: Seed dry mass [TOP111] (https://top-thesaurus.org/index) exact match: Seed dry mass [TRY:26] (https://www.try-db.org/de/de.php) close match: seed weight & seed shape [LEDA:5.2] (https://uol.de/en/landeco/research/leda/standards) exact match: Seed mass [GIFT:3.2] (https://gift.uni-goettingen.de) exact match: seed mass [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Seed dry mass [BROT:27] (http://doi.org/10.1038/sdata.2018.135) |
references |
Pérez-Harguindeguy 2013 Kew Seed Information Database 2022 Saatkamp 2018 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | seed_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012610 |
Diaspore dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012611 |
alternative label | diaspore_dry_mass |
description |
A seed morphology trait [TO:0000184] which is the dry [PATO:0001824] mass [PATO:0000125] of a seed [PO:0009010] and the seed dispersal [EnvThes:21042] structures [PATO:0000141]. Dry mass of a plant’s dispersal unit, including the seed and any dispersal appendages; synonymous with the term dispersule and often synonymous with the term disseminule. |
comments | Data mapped onto this trait have been very explicitly defined as a ‘diaspore’. There will be additional values mapped as either ‘seed_dry_mass’ or ‘fruit_dry_mass’ that are also diaspores, but have identified only as being a ‘seed’ or ‘fruit’. In addition, it is expected that some observations in AusTraits mapped onto ‘seed_dry_mass’ will actually include both the seed and some dispersal tissue, if the two cannot easily be separated. |
value type | continuous variable |
unit |
mg milligram |
minAllowedValue | 1e-05 |
maxAllowedValue | 1e+06 |
has broader | seed morphology trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic | mass |
keyword |
dispersal reproduction seed dispersal |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Dispersule dry mass trait [TOP110] (https://top-thesaurus.org/index) exact match: Dispersal unit dry mass [TRY:233] (https://www.try-db.org/de/de.php) close match: seed weight & seed shape [LEDA:5.2] (https://uol.de/en/landeco/research/leda/standards) |
references |
Pérez-Harguindeguy 2013 Kew Seed Information Database 2022 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | diaspore_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012611 |
Seed embryo and endosperm dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012612 |
alternative label | seed_dry_mass_reserve |
description |
A seed morphology trait [TO:0000184] which is the dry [PATO:0001824] mass [PATO:0000125] of the components of a seed [PO:0009010] that provide energy [PATO:0001021] to a seedling [EnvThes:20698], generally the embryo [PO:0009009] and, if present, the endosperm [PO:0009089]. Dry mass of a seed’s embryo and endosperm (if present), the components of a seed that provide energy to a seedling. These tissues are distinct from a seed’s dispersal structures or protective tissues. |
comments | |
value type | continuous variable |
unit |
mg milligram |
minAllowedValue | 1e-05 |
maxAllowedValue | 1e+05 |
has broader | seed morphology trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic | mass |
keyword |
energy plant embryo endosperm reproduction seedling storage organ |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references |
Westoby 1990 Lamont & Groom 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | seed_mass_reserve |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012612 |
Seed length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012613 |
alternative label | seed_length |
description |
A seed morphology trait [TO:0000184] which is the greatest linear dimension [PATO:0001708] (axis) of a seed [PO:0009010] and is perpendicular to [PATO:0002434] the seed width [PATO:0000921] and seed height [PATO:0000119] axes [NCIT:C25154]. Longest linear seed dimension. |
comments | Observations of this trait in AusTraits are almost certainly an undocumented mix of dimensions of true seeds and diaspores. When all or part of the fruit is not easily separated from the true seed, many researchers will have recorded and submitted a diaspore length, but labeled the data ‘seed length’. The intent of this measurement is that it excludes appendages, although it is likely some submitted measurements include small appendages that are not easily separated from the seed. |
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 1000 |
has broader | seed morphology trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
length size |
keyword | reproduction |
scope note | |
has exact match | seed length |
has close match | |
has related match | |
examples |
exact match: Seed length [TOP91] (https://top-thesaurus.org/index) exact match: Seed length [TRY:27] (https://www.try-db.org/de/de.php) close match: seed weight & seed shape [LEDA:5.2] (https://uol.de/en/landeco/research/leda/standards) exact match: Seed length [GIFT:3.10] (https://gift.uni-goettingen.de) exact match: seed length [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references |
Pérez-Harguindeguy 2013 Kew Seed Information Database 2022 Saatkamp 2018 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012613 |
Seed width
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012614 |
alternative label | seed_width |
description |
A seed morphology trait [TO:0000184] which is the longest [NCIT:C25558] width [PATO:0000921] dimension of a seed [PO:0009010] and is perpendicular to [PATO:0002434] the seed length [PATO:0000122] and seed height [PATO:0000119] axes [NCIT:C25154]. Longest width dimension of a seed; orthogonal to the length and height axes. |
comments | Observations of this trait in AusTraits are almost certainly an undocumented mix of dimensions of true seeds and diaspores. When all or part of the fruit is not easily separated from the true seed, many researchers will have recorded and submitted a diaspore width, but labeled the data ‘seed width’. The intent of this measurement is that it excludes appendages, although it is likely some submitted measurements include small appendages that are not easily separated from the seed. |
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 1000 |
has broader | seed morphology trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
width size |
keyword | reproduction |
scope note | |
has exact match | seed width |
has close match | |
has related match | |
examples |
exact match: Seed width [TOP95] (https://top-thesaurus.org/index) exact match: Seed width [TRY:239] (https://www.try-db.org/de/de.php) close match: seed weight & seed shape [LEDA:5.2] (https://uol.de/en/landeco/research/leda/standards) exact match: Seed width [GIFT:3.11] (https://gift.uni-goettingen.de) |
references |
Pérez-Harguindeguy 2013 Kew Seed Information Database 2022 Saatkamp 2018 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012614 |
Seed height
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012615 |
alternative label | seed_height |
description |
A seed morphology trait [TO:0000184] which is the shortest diameter [NCT:C120715] axis [NCIT:C25154] of a seed [PO:0009010] and is perpendicular to [PATO:0002434] the seed length [PATO:0000122] and seed width [PATO:0000921] axes. Shorter width dimension of a seed; orthogonal to its length and width axes. |
comments | Observations of this trait in AusTraits are almost certainly an undocumented mix of dimensions of true seeds and diaspores. When all or part of the fruit is not easily separated from the true seed, many researchers will have recorded and submitted a diaspore height, but labeled the data ’seed height. The intent of this measurement is that it excludes appendages, although it is likely some submitted measurements include small appendages that are not easily separated from the seed. |
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 1000 |
has broader | seed morphology trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
height size |
keyword | reproduction |
scope note | |
has exact match | seed thickness |
has close match | |
has related match | |
examples |
exact match: Seed thickness [TOP99] (https://top-thesaurus.org/index) close match: seed weight & seed shape [LEDA:5.2] (https://uol.de/en/landeco/research/leda/standards) exact match: Seed height [GIFT:3.12] (https://gift.uni-goettingen.de) |
references |
Pérez-Harguindeguy 2013 Kew Seed Information Database 2022 Saatkamp 2018 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | seed_breadth |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012615 |
Seed volume
Seed count
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012617 |
alternative label | seed_count |
description |
A seed morphology trait [TO:0000184] which is the count [NCIT:C25463] of seeds [PO:0009010] produced by an individual [EFO:0000542] in a given location [NCIT:C25341]. Number of seeds produced by a plant. |
comments | This trait should be used to document the seed output of a large, healthy individual in a population, representing the maximum seed output by the taxon under given environmental conditions. |
value type | continuous variable |
unit | {count} |
minAllowedValue | 0 |
maxAllowedValue | 1e+05 |
has broader | seed morphology trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
has number of count maximum |
keyword | reproduction |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012617 |
Seed shape
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012618 |
alternative label | seed_shape |
description |
A seed morphology trait [TO:0000184] which is the 3-D [PATO:0001710] shape [PATO:0000052] of a seed [PO:0009010] considering the relative seed length [PATO:0000122], seed width [PATO:0000921], and seed height PATO:0000119] dimensions and the curvature [PATO:0001591] of the seed’s surface [NCIT:C25245]. Three-dimensional shape of the seed. |
comments | The trait values indicate the approximate shape of the seed, acknowledging few seeds are exactly ellipsoid, globoid, etc. The list of terms has been chosen to represent different length:width:height ratios and different levels of symmetry. Terms that suggest very specific shapes have generally been grouped into a broader category for increased interoperability across datasets. |
value type | categorical variable |
has narrower |
seed_shape_comma-shaped A seed displaying a single arc of curvature, such that it bilaterally symmetrical. (Synonyms, comma-shaped, falcate, sickle-shaped scimitar-shaped) seed_shape_conical Cone-shaped, with a broad flat base and narrow apex; turbinate refers to the inverse shape. (Synonyms, obconical, cone-shaped, turbinate, top-shaped) seed_shape_cuneate A 3-dimensional shape that is wedge-shaped or boat-shaped. seed_shape_cylindrical A cylinder, a shape with a flat top and bottom that are circular or elliptical in outline and are linked by a curved surface. (Synonyms, terete) seed_shape_discoid A subset of cylinder, a shape with a flat, circular or elliptical top and bottom, linked by a curved surface, where the length of the curved surface is much shorter than the cross-section of the flat surfaces. (Synonyms, flat) seed_shape_ellipsoid A 3-dimensional shape that is elliptic in long section and circular in cross section; length:width ratio between 2:1 and 3:2. (Synonyms, obloid, oblong) seed_shape_ellipsoid_flattened A 3-dimensional shape that is elliptic in long section and and laterally compressed/flattened such that it is non-circular in cross section; length:width ratio between 2:1 and 3:2. seed_shape_fusiform Spindle-shaped; A 3-dimension shape that is narrowly ellipsoid, circular in cross-section and tapering sharply toward both ends. (Synonyms, spindle-shaped) seed_shape_globoid A 3-dimensional shape that is circular in both long section and cross section. (Synonyms, globose, globular, spherical) seed_shape_globoid_flattened A 3-dimensional shape that is circular in both long section and somewhat flattened such that it is non-circular in cross section. seed_shape_hemispheric Half a sphere or globe, with a flat base, domed top, and circular in cross-section. (Synonyms, convex) seed_shape_hemispheric_flattened A 3-dimensional shape that is a laterally compressed/flattened half-sphere or globe; shape has a flat base, a domed top, and is elliptical in cross-section. seed_shape_lenticular Shaped like a biconvex lens and circular in cross section; shaped like a lentil. seed_shape_orbicular A poorly defined term that remains in AusTraits only as a placeholder; it appears to be used as both globoid (spherical) and lenticular by different authors. seed_shape_ovoid A 3-dimensional shape that is egg-shaped in long section and circular in cross section. Term as used in AusTraits includes variants on egg-shaped including pyriform (pear-shaped) and obovoid (inversely egg-shaped) (Synonyms, pyriform, obovoid) seed_shape_ovoid_elongated A 3-dimensional shape that is egg-shaped in long section and circular in cross section, where the length dimension is much longer than the width/height dimensions. Term as used in AusTraits includes specific shapes club-shaped (clavate/obclavate) and tear-shaped (lachrimiform). (Synonyms, lachrimiform, tear-shaped, lachrymiform, clavate; obclavate, club-shaped) seed_shape_ovoid_flattened A 3-dimensional shape that is egg-shaped in long section and laterally compressed/flattened such that is non-circular in cross section. seed_shape_polyhedral A 3-dimensional shape with distinct, fairly flat faces and edges; includes prisms and tetrahedral shaped seeds. (Synonyms, rhomboid, prismatic, pyramidal, rectangular, square) seed_shape_polyhedral_elongated A 3-dimensional shape with distinct, fairly flat faces and edges, where the length dimension is much longer than the width/height dimensions; includes elongate prisms and elongate tetrahedral shaped seeds. seed_shape_polyhedral_inflated A 3-dimensional shape with distinct faces and edges but the faces tend to bulge outwards. seed_shape_reniform Having a cross-section that is roughly circular with a notch; strictly a kidney-shape but the definition applied here includes heart-shaped seeds and other seeds with a distinct notch. (Synonyms, cordiform, kidney-shaped, heart-shaped) seed_shape_winged A seed with wings. (Synonyms, samara) seed_shape_sectoroid Shaped like an orange segment or wedge of a sphere. (Synonyms, wedge-shaped) seed_shape_sinusoidal A seed with two arcs of curvature or a single arc, such that it lacks an axis of symmetry. (Synonyms, sigmoidal) |
has broader | seed morphology trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
shape 3-D extent morphology curvature |
keyword | reproduction |
scope note | |
has exact match | seed shape |
has close match | |
has related match | |
examples |
exact match: Seed shape [TRY:349] (https://www.try-db.org/de/de.php) close match: Basic seed shape [BROT:29] (http://doi.org/10.1038/sdata.2018.135) |
references |
Pérez-Harguindeguy 2013 Simpson 2019 Saatkamp 2018 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012618 |
Seed surface hairs
Seed surface texture
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012620 |
alternative label | seed_surface_texture |
description |
A seed morphology trait [TO:0000184] which is the texture [PATO:0000150] of the surface [NCIT:C25245] of a mature [PATO:0001701] seed [PO:0009010]. Surface texture of a mature seed, including descriptions of configuration (overall surface patterns of the epidermal cells) and epidermal excrescence (surface patterns caused by structural outgrowths of the epidermis). |
comments |
This trait does not include values that capture seed appendages; see the trait dispersal_appendages for descriptions of seed appendages.
|
value type | categorical variable |
has narrower |
seed_surface_texture_bumpy Seed surface covered with minute, rounded protuberances. (Synonyms, colliculate, verrucate, papillate, tuberculate, undulate) seed_surface_texture_grooved Seed surface covered with grooves. seed_surface_texture_netted Seed surface covered with raised, reticulate, interconnected ridges. (Synonyms, reticulate, honey-combed) seed_surface_texture_papery Seed surface with a thin and papery texture. (Synonyms, chartaceous) seed_surface_texture_pitted Seed surface pitted. (Synonyms, foveolate, foveate, dimpled, punctate, lacunose) seed_surface_texture_ribbed Seed surface with longitudinal raised ribs or ridges. (Synonyms, costate, carinate, lineate, fluted, striate, strigose, lineolate, scalariform, ridged) seed_surface_texture_rough Seed surface rough with no organisation of markings, resembling sandpaper. (Synonyms, scabrous) seed_surface_texture_scaly Seed surface rough with loose scales differing in direction or not parallel in direction. (Synonyms, scurfy, squarrose) seed_surface_texture_smooth Seed surface smooth, lacking texture. (Synonym, glabrous) seed_surface_texture_spiny Seed surface with spines. (Synonyms, echinulate) seed_surface_texture_wrinkled Seed surface with a wrinkled, rugose texture. (Synonyms, rugose, rugulose, bullate) |
has broader | seed morphology trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
texture morphology |
keyword | reproduction |
scope note | |
has exact match |
seed texture seed coat texture |
has close match | |
has related match | |
examples | |
references |
Pérez-Harguindeguy 2013 Simpson 2019 Saatkamp 2018 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | seed_texture |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012620 |
Seed surface reflectivity
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012621 |
alternative label | seed_surface_reflectivity |
description |
A seed morphology trait [TO:0000184] which is the reflectivity [PATO:0001297] of the surface [NCIT:C25245] of a mature [PATO:0001701] seed [PO:0009010]. Surface reflectivity of a seed, indicating whether a seed is shiny or dull. |
comments | |
value type | categorical variable |
has narrower |
seed_surface_reflectivity_dull Seed surface appears dull, indicating it has a low reflectivity. seed_surface_reflectivity_shiny Seed surface appears shiny or glossy, indicating it has a high reflectivity. (Synonyms, glossy, lustrous, polished) |
has broader | seed morphology trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
texture morphology reflectivity |
keyword | reproduction |
scope note | |
has exact match | seed coat luster |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 20/04/2023 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012621 |
Diaspore fleshiness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012622 |
alternative label | diaspore_fleshiness |
description |
A seed morphology trait [TO:0002629] which indicates whether a mature [PATO:0001701] fresh [EnvThes:21976] diaspore is fleshy [PATO:0002351], where a diaspore is a plant’s dispersal [EnvThes:21038] unit and includes both the seed [PO:0009010] and the seed dispersal [EnvThes:21042] structures [PATO:0000141]. Binary variable, dividing diaspores (dispersal units) into ‘dry’ versus ‘fleshy’ based on whether they have fleshy pericarps, fleshy accessory tissues (such as the receptacle in Podocarpus), or fleshy appendages (e.g. aril, thalamus, receptacle, calyx, rachis or bract or succulent pedicel) when mature. Dispersal units where none of these tissues is fleshy are designated as ‘non-fleshy’. |
comments | |
value type | categorical variable |
has narrower |
diaspore_fleshiness_dry Diaspores where the true fruit, accessory tissues and dispersal appendages are all dry when mature. diaspore_fleshiness_fleshy Diaspores where either the true fruit, accessory tissues or dispersal appendages are fleshy when mature. |
has broader |
seed morphology trait fruit morphology trait |
plant structure plant structure plant structure |
reproductive shoot system seed fruit |
measured characteristic |
composition structure |
keyword |
fleshy dispersal seed dispersal reproduction |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Fruit type [TRY:99] (https://www.try-db.org/de/de.php) |
references |
Kew Seed Information Database 2022 Beentje 2010 Spjut 2003 Chen 2015 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012622 |
Dispersal appendage
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012623 |
alternative label | dispersal_appendage |
description |
A seed morphology trait [TO:0002629] which indicates external [NCIT:C44280] appendages [NCIT:C61460] on the seed [PO:0009010] or the seed’s dispersal [OMIT: 0027297] structures [PATO:0000141] whose presumed function [NCIT:C25518] is to facilitate seed dispersal [EnvThes:21042]. External appendages of the dispersule presumed to facilitate seed dispersal away from the parent plant. |
comments | |
value type | categorical variable |
has narrower |
dispersal_appendage_aril Fleshy outgrowth of a seed, that often attracts animals like birds or ants. dispersal_appendage_bristles Bristle-like projections. Trait value includes awns, which are slender, bristle-like projections in some grasses. dispersal_appendage_bracts_and_glumes When the bracts below the inflorescence are persistent and functional as dispersal appendages. This includes persistent glumes, the modified membranous bracts in the family Poaceae that surround the spikelet of a grass. dispersal_appendage_elaiosome Fleshy (often fatty) appendage on seeds that attracts ants. dispersal_appendage_fleshy_reward Broad term that includes a suite of appendages that provides a fleshy reward to attract dispersers; highest level of resolution available for some studies. dispersal_appendage_floating_seed Seed that is dispersed by floating on water. dispersal_appendage_flotation_scales Scales enhancing flotation, thereby assisting with dispersal. dispersal_appendage_floral_parts When some plant floral parts (the petals, sepals, or style) are persistent and aid in seed and fruit dispersal. This is a broad term not explicitly suggesting a dispersal mechanism. dispersal_appendage_hairs Modified hairs that aid in seed dispersal. dispersal_appendage_hooks A rear-facing point, as in a fish hook that aids in seed and fruit dispersal. dispersal_appendage_inflated_parts When some part of the seed, fruit, or associated tissues is inflated, aiding in seed or fruit dispersal. dispersal_appendage_none When a fruit and associated tissues lack any dispersal appendages. Includes exarillate and taxa with explicitly deciduous pappus. dispersal_appendage_pappus The calyx in Asteraceae that has been modified into bristles, hairs, scales or awns that are attached to the apex of the fruit. Taxa assigned this trait value have a persistent pappus that aids in dispersal, often, but not exclusively through wind dispersal. The pappus can also assist with flotation. dispersal_appendage_plumose Fruit, seed, style, or other floral component that is plumose and assists with dispersal. dispersal_appendage_receptacle Fleshy receptacle that aids in dispersal. dispersal_appendage_sarcotesta Fleshy seed coat that aids in dispersal. dispersal_appendage_spines Spines that aid in dispersal. dispersal_appendage_tumbleweed Plant growth form, whereby the aboveground plant component detaches from the roots and is readily rolled by wind across the ground, aiding in dispersal. dispersal_appendage_wings Referring to wing-like seed extensions that aid in wind dispersal. dispersal_appendage_wing_or_plume Broad term that includes a suite of appendages that aid in wind dispersal; highest level of resolution available for some studies. |
has broader |
seed morphology trait fruit morphology trait interspecific interactions trait |
plant structure plant structure plant structure |
reproductive shoot system seed fruit |
measured characteristic |
shape structure mechanism |
keyword |
seed dispersal dispersal reproduction biological process involved in symbiotic interaction, symbiosis appendage |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Dispersal unit type [TRY:231] (https://www.try-db.org/de/de.php) |
references |
Pérez-Harguindeguy 2013 Saatkamp 2018 Wigley 2020 LEDA Data Standards 2005 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012623 |
Dispersal unit
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012624 |
alternative label | dispersal_unit |
description |
A reproductive shoot system morphology trait [TO:0000786] which is the plant structure [PO:0009011] involved in dispersal [EnvThes:21038], broadly distinguishing between taxa [NCIT:C40098] whose main dispersal units are spores [NCIT:C79672], seeds [PO:0009010] or fruit [PO:0009001]. Broad terms indicating the plant structure involved in dispersal, distinguishing between taxonomic groups whose main dispersal units are spores, seeds, or fruit. |
comments | |
value type | categorical variable |
has narrower |
dispersal_unit_fruit Dispersal unit is a fruit. dispersal_unit_seed Dispersal unit is a seed. dispersal_unit_spore Dispersal unit is a spore. dispersal_unit_seedling Dispersal unit is a seedling. (Synonyms, viviparous) |
has broader |
seed morphology trait fruit morphology trait |
plant structure plant structure plant structure |
reproductive shoot system seed fruit |
measured characteristic |
organismal quality structure |
keyword |
seed dispersal dispersal reproduction spore |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
close match: Dispersal unit type [TRY:231] (https://www.try-db.org/de/de.php) exact match: Diaspore [BROT:24] (http://doi.org/10.1038/sdata.2018.135) |
references | Pérez-Harguindeguy 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012624 |
Seed colour
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0012625 |
alternative label | seed_colour |
description |
A seed morphology trait [TO:0000184] which is the primary [NCIT:C25251] colour [PATO:0000014] of a seed coat [PO:0009088] of a mature [PATO:0001701] seed [PO:0009010]. Human visible dominant colour of a seed coat (outermost layer) at maturity. |
comments | |
value type | categorical variable |
has narrower |
seed_colour_blue_purple Seed coat is pink. seed_colour_green Seed coat is red. seed_colour_pink Seed coat is orange. seed_colour_red_brown Seed coat is yellow. seed_colour_white_cream Seed coat is green. seed_colour_yellow_orange Seed coat is blue. seed_colour_grey Seed coat is purple. seed_colour_black Seed coat is white. |
has broader | seed morphology trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic | colour / color |
keyword | seed coat |
scope note | applicable to plants with seeds |
has exact match | seed color |
has close match | |
has related match | |
examples | close match: Fruit/seed color [TRY:585] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 31/03/2025 |
date modified | 31/03/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0012625 |
Leaf secondary vein angle
Major leaf vein density
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013012 |
alternative label | leaf_major_vein_density |
description |
A vascular tissue morphology trait [TO:0000470] which is the ratio [PATO:0001470] of the total length [PATO:0000122] of major leaf lamina veins [PO:0020138] (defined as primary leaf veins [PO:0025413], secondary leaf veins [PO:0020140], and tertiary leaf veins [PO:0008021]) to leaf lamina [PO_0020039] area [PATO:0001323]. The length of major leaf lamina veins per unit leaf area, where primary, secondary and tertiary leaf lamina veins are considered major veins.
|
comments |
This trait records the length of only major veins (primary, secondary and tertiary veins), while the trait leaf_total_vein_density records the length of all orders of leaf veins.
|
value type | continuous variable |
unit |
mm/mm2 reciprocal millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 20 |
has broader |
leaf vein morphology trait water transport trait, hydraulic trait leaf morphology trait |
plant structure | leaf |
measured characteristic |
length per unit area ratio; proportion count density |
keyword |
leaf lamina vein primary leaf vein secondary leaf vein tertiary leaf vein water transport |
scope note | Vascular plants with leaves. |
has exact match | |
has close match | |
has related match | leaf vein morphology trait |
examples | close match: Leaf vein density [TRY:740] (https://www.try-db.org/de/de.php) |
references |
Pérez-Harguindeguy 2013 Sack 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | vein_density |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013012 |
Length of all minor and major leaf lamina veins per unit area
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013013 |
alternative label | leaf_total_vein_density |
description |
A vascular tissue morphology trait [TO:0000470] which is the ratio [PATO:0001470] of the total length [PATO:0000122] of all leaf lamina veins [PO:0020138] to leaf lamina [PO_0020039] area [PATO:0001323]. The length of all minor and major leaf lamina veins per unit leaf area. |
comments |
This trait records the length of all orders of leaf lamina veins, while the trait leaf_major_vein_density records only the length of major veins (primary, secondary and tertiary veins).
|
value type | continuous variable |
unit |
mm/mm2 millimetre per square millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 20 |
has broader |
leaf vein morphology trait water transport trait, hydraulic trait leaf morphology trait |
plant structure | leaf |
measured characteristic |
length per unit area ratio; proportion count density |
keyword |
leaf lamina vein water transport |
scope note | Vascular plants with leaves. |
has exact match | |
has close match | |
has related match | leaf vein morphology trait |
examples | close match: Leaf vein density [TRY:740] (https://www.try-db.org/de/de.php) |
references |
Pérez-Harguindeguy 2013 Sack 2013 |
date created | 31/10/2022 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | vein_density |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013013 |
Leaf vein frequency
Stem xylem vessel density
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013111 |
alternative label | stem_vessel_density |
description |
A vascular tissue morphology trait [TO:0000470] which is the ratio [PATO:0001470] of the count [NCIT:C25463] of xylem vessels [PO:0025417] in a stem [PO:0009047] cross-section [NCIT:C63795] to stem cross-sectional area [PATO:0001323]. The ratio of the count of xylem vessels in a stem cross-section to stem cross-sectional area. |
comments | |
value type | continuous variable |
unit |
{count}/mm2 reciprocal square millimetre |
minAllowedValue | 0.4 |
maxAllowedValue | 2000 |
has broader |
xylem vessel morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic |
has number of count density per unit area ratio; proportion count |
keyword |
xylem vessel cross section water transport sapwood |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Wood vessel density [TRY:1237] (https://www.try-db.org/de/de.php) exact match: Branch vessel density [TRY:3390] (https://www.try-db.org/de/de.php) exact match: vessel number [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references |
Scholz 2013 Zanne 2010 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | vessel_density |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013111 |
Leaf xylem vessel density
Stem xylem vessel diameter
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013113 |
alternative label | stem_vessel_diameter |
description |
A vascular tissue morphology trait [TO:0000470] which is the diameter [PATO:0001334] of xylem vessels [PO:0025417] in a stem [PO:0009047]. Diameter of xylem vessels in a stem. |
comments | As the adjacent vessels in an individual stem vary notably in size, this trait should never document a single vessel diameter from an individual, but instead the mean (or possibly maximum) vessel diameter from a much larger sample size. Note as well, that vessel diameters increase from a growing tip to the base of a plant and the location sampled should be specified in either the methods or as a context property. |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 1 |
maxAllowedValue | 1000 |
has broader |
xylem vessel morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic | diameter |
keyword |
xylem vessel water transport sapwood |
scope note | |
has exact match | Wood vessels diameter |
has close match | |
has related match | |
examples |
exact match: Wood vessel diameter [TRY:1238] (https://www.try-db.org/de/de.php) exact match: Branch vessel diameter [TRY:3391] (https://www.try-db.org/de/de.php) exact match: vessel lumen area [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references |
Scholz 2013 Zanne 2010 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | vessel_diameter |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013113 |
Stem xylem vessel hydraulic mean diameter
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013114 |
alternative label | stem_vessel_diameter_hydraulic |
description |
A vascular tissue morphology trait [TO:0000470] which is a weighted arithmetic mean [STATO:0000398] diameter [PATO:0001334] of xylem vessels [PO:0025417] in a stem [PO:0009047], reflecting the greater relative contribution of wider vessels to hydraulic conductivity [EnvThes:22133] as described by the Hagen-Poiseuille equation [hupson:SCAIVPH_00000131] . Hydraulic diameter (or hydraulically weighted diameter) is a weighted arithmetic mean diameter of xylem vessels in a stem, reflecting the greater contribution of wide vessels to actual hydraulic conductivity. It is based on the Hagen-Poiseuille law, a fluid dynamics equation that describes laminar flow through a tube. It shows that a few large conduits transport an equal amount of water as many small ones, as flow rate is proportional to the 4th power of the conduit’s diameter. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 1 |
maxAllowedValue | 500 |
has broader |
xylem vessel morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic |
diameter weighted arithmetic mean |
keyword |
xylem vessel hydraulic conductivity water transport sapwood Hagen Poiseuille equation |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references |
Tyree & Ewers 1991 Scholz 2013 Tyree & Zimmerman 2002 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | vessel_diameter_hydraulic |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013114 |
Leaf xylem vessel diameter
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013115 |
alternative label | leaf_vessel_diameter |
description |
A vascular tissue morphology trait [TO:0000470] which is the diameter [PATO:0001334] of xylem vessels [PO:0025417] in a leaf [PO:0025034]. Diameter of xylem vessels in a leaf. |
comments | As the adjacent vessels in an individual stem vary notably in size, this trait should never document a single vessel diameter from an individual, but instead the mean (or possibly maximum) vessel diameter from a much larger sample size. Note as well, that vessel diameters increase from a growing tip to the base of a plant and the location sampled should be specified in either the methods or as a context property. |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 1 |
maxAllowedValue | 250 |
has broader |
xylem vessel morphology trait water transport trait, hydraulic trait leaf morphology trait |
plant structure | leaf |
measured characteristic | diameter |
keyword |
xylem vessel hydraulic conductivity water transport |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf vessel diameter [TRY:367] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | vessel_diameter_leaves |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013115 |
Stem xylem vessel lumen fraction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013116 |
alternative label | stem_vessel_lumen_fraction |
description |
A vascular tissue morphology trait [TO:0000470] which is the ratio [PATO:0001470] of total xylem vessel [PO:0025417] lumen [PO:0025117] cross-sectional [NCIT:C63795] area [PATO:0001323] to stem [PO:0009047] cross-sectional area. The fraction of a stem cross-section comprised of lumen and calculated as the ratio of the total cross-sectional area comprised of xylem vessels (lumen fraction) to the total stem cross-sectional area. |
comments | |
value type | continuous variable |
unit |
mm2/mm2 square millimetre per square millimetre |
minAllowedValue | 0.001 |
maxAllowedValue | 1 |
has broader |
xylem vessel morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic |
dimensionless ratio per unit area cross section ratio; proportion |
keyword |
xylem vessel plant anatomical space; lumen vessel lumen water transport sapwood |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Stem conduit lumen cross-sectional area (vessels and tracheids) per stem sapwood cross-sectional are [TRY:172] (https://www.try-db.org/de/de.php) |
references |
Scholz 2013 Zanne 2010 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | vessel_lumen_fraction |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013116 |
Stem xylem vessel multiple fraction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013117 |
alternative label | stem_vessel_multiple_fraction |
description |
A vascular tissue morphology trait [TO:0000470] which is the ratio [PATO:0001470] of the count [NCIT:C25463] of groups of xylem vessels [PO:0025417] to the total count of xylem vessels, with a value approximating 1 indicating a tendency towards solitary vessels. Vmf; A vessel grouping index, calculated as the number of groups of vessels divided by the total number of vessels, where vessels are considered to be part of the same group if they are in contact with one another. A Vmf value approximating 1 denotes a tendency towards solitary vessels while a smaller value indicates a tendency of vessels to occur in clusters. |
comments | |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 0.001 |
maxAllowedValue | 1 |
has broader |
xylem vessel morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic |
dimensionless ratio has number of count ratio; proportion |
keyword |
xylem vessel water transport sapwood |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Wood vessel grouping [TRY:276] (https://www.try-db.org/de/de.php) |
references | Scholz 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | vessel_multiple_fraction |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013117 |
Stem non-lumen fraction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013118 |
alternative label | stem_vessel_non_lumen_fraction |
description |
A vascular tissue morphology trait [TO:0000470] which is the proportion of a cross-section of stem that is not comprised of lumen (empty space ) and is calculated at 1 minus the ratio [PATO:0001470] of total xylem vessel [PO:0025417] and tracheid [PO:0000301] lumen [PO:0025117] cross-sectional [NCIT:C63795] area [PATO:0001323] to stem [PO:0009047] cross-sectional area.The fraction of a stem cross-section not comprised of lumen (the empty space in xylem vessels and tracheids) and calculated as one minus the ratio of the total cross-sectional area comprised of xylem vessels and tracheids (lumen fraction) to the total stem cross-sectional area. |
comments | |
value type | continuous variable |
unit |
mm2/mm2 square millimetre per square millimetre |
minAllowedValue | 0.001 |
maxAllowedValue | 1 |
has broader |
xylem vessel morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic |
dimensionless ratio per unit area cross section ratio; proportion |
keyword |
xylem vessel plant anatomical space; lumen vessel lumen water transport sapwood tracheids |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Wood cross-sectional fraction of Vessel (conduit) area [TRY:3018] (https://www.try-db.org/de/de.php) |
references |
Scholz 2013 Zanne 2010 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | vessel_non_lumen_fraction |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013118 |
xylem vessel wall fraction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013119 |
alternative label | stem_vessel_wall_fraction |
description |
A vascular tissue morphology trait [TO:0000470] which is the ratio [PATO:0001470] of xylem vessel [PO:0025417] cell wall [GO:0009505] cross-sectional [NCIT:C63795] area [PATO:0001323] to total xylem vessel cross-sectional area. Fraction of xylem vessels comprised of cell wall, calculated as the ratio of xylem vessel cell wall cross-sectional area to total xylem vessel cross-sectional area. |
comments | |
value type | continuous variable |
unit |
mm2/mm2 square millimetre per square millimetre |
minAllowedValue | 0.001 |
maxAllowedValue | 1 |
has broader |
xylem vessel morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic |
dimensionless ratio per unit area cross section ratio; proportion |
keyword |
xylem vessel plant-type cell wall water transport sapwood |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | vessel_wall_fraction |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013119 |
Xylem vulnerability index
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013120 |
alternative label | stem_xylem_vulnerability_index |
description |
A vascular tissue morphology trait [TO:0000470] which is the ratio [PATO:0001470] of a stem’ [PO:0009047] average xylem vessel [PO:0025417] diameter [PATO:0001334] to the stem’s xylem vessel count density [ECSO:00001160]. The ratio of a stem’s average xylem vessel diameter to the stem’s xylem vessel density, an index of sap conductance and xylem vessel susceptibility to vessel cavitation. |
comments | |
value type | continuous variable |
unit |
um.m2/{count} square millimetre micrometre |
minAllowedValue | 0.05 |
maxAllowedValue | 1000 |
has broader |
xylem vessel morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic |
diameter count density ratio; proportion |
keyword |
xylem water transport sapwood |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Scholz 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | vulnerability_index |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013120 |
Leaf xylem vessel wall thickness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013121 |
alternative label | leaf_vessel_wall_thickness |
description |
A vascular tissue morphology trait [TO:0000470] which is the thickness [PATO:0000915] of the wall of xylem vessels [PO:0025417] in a leaf [PO:0025034]. The wall thickness of xylem vessels in a leaf. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader |
xylem vessel morphology trait water transport trait, hydraulic trait leaf morphology trait |
plant structure | leaf |
measured characteristic |
thickness size |
keyword |
xylem vessel water transport hydraulic conductivity |
scope note | applicable to plants with vessels |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 31/03/2025 |
date modified | 31/03/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013121 |
Stem xylem vessel wall thickness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013122 |
alternative label | stem_vessel_wall_thickness |
description |
A vascular tissue morphology trait [TO:0000470] which is the thickness [PATO:0000915] of the wall of xylem vessels [PO:0025417] in a stem [PO:0009047]. The wall thickness of xylem vessels in a stem. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader |
xylem vessel morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic |
thickness size |
keyword |
xylem vessel water transport sapwood hydraulic conductivity |
scope note | applicable to plants with vessels |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 31/03/2025 |
date modified | 31/03/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013122 |
Leaf xylem vessel length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013123 |
alternative label | leaf_vessel_length |
description |
A vascular tissue morphology trait [TO:0000470] which is the length [PATO:0000122] of xylem vessels [PO:0025417] in a leaf [PO:0025034]. The length of xylem vessels in a leaf. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 1 |
maxAllowedValue | 10000 |
has broader |
xylem vessel morphology trait water transport trait, hydraulic trait leaf morphology trait |
plant structure | leaf |
measured characteristic |
length size |
keyword |
xylem vessel water transport |
scope note | applicable to plants with vessels |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 31/03/2025 |
date modified | 31/03/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013123 |
Stem xylem vessel length
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013124 |
alternative label | stem_vessel_length |
description |
A vascular tissue morphology trait [TO:0000470] which is the length [PATO:0000122] of xylem vessels [PO:0025417] in a stem [PO:0009047]. The length of xylem vessels in a stem. |
comments | |
value type | continuous variable |
unit |
um micrometre |
minAllowedValue | 1 |
maxAllowedValue | 10000 |
has broader |
xylem vessel morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic |
length size |
keyword |
xylem vessel water transport sapwood |
scope note | applicable to plants with vessels |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 31/03/2025 |
date modified | 31/03/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013124 |
Wood axial parenchyma fraction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013161 |
alternative label | wood_axial_parenchyma_fraction |
description |
A vascular tissue morphology trait [TO:0000470] which is the fraction of a cross-section [NCIT:C63795] of sapwood [PO:0004513] comprised of axial secondary xylem parenchyma [PO:0004533], calculated as ratio [PATO:0001470] of axial parenchyma cross-sectional area [PATO:0001323] to sapwood cross-sectional area. The fraction of a cross-section of sapwood comprised of axial parenchyma. It is calculated as the ratio of total axial parenchyma cross-sectional area to sapwood cross-sectional area. |
comments | |
value type | continuous variable |
unit |
mm2/mm2 square millimetre per square millimetre |
minAllowedValue | 0.001 |
maxAllowedValue | 1 |
has broader |
vascular tissue morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic |
dimensionless ratio ratio; proportion per unit area cross section |
keyword |
sapwood axial secondary xylem parenchyma wood wood, secondary xylem |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Wood cross-sectional fraction of axial parenchyma area [TRY:3021] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013161 |
Wood conduit fraction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013162 |
alternative label | wood_conduit_fraction |
description |
A vascular tissue morphology trait [TO:0000470] which is the fraction of a cross-section [NCIT:C63795] of sapwood [PO:0004513] comprised of all water [CHEBI:15377] transport conduits (both tracheids [PO:0000301] and xylem vessels [PO:0025417]), calculated as the ratio [PATO:0001470] of total cross-sectional area [PATO:0001323] of conduits to sapwood cross-sectional area. The fraction of a cross-section of sapwood comprised of all water transport conduits, including both xylem vessels and tracheids. It is calculated as the ratio of total conduit cross-sectional area to sapwood cross-sectional area. |
comments | |
value type | continuous variable |
unit |
mm2/mm2 square millimetre per square millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader |
vascular tissue morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic |
dimensionless ratio ratio; proportion per unit area cross section |
keyword |
sapwood tracheids xylem wood water transport wood, secondary xylem |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Wood cross-sectional fraction of Vessel (conduit) area [TRY:3018] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013162 |
Wood fibre fraction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013163 |
alternative label | wood_fibre_fraction |
description |
A vascular tissue morphology trait [TO:0000470] which is the fraction of a cross-section [NCIT:C63795] of sapwood [PO:0004513] comprised of plant fiber cells [PO:0025407], calculated as the ratio [PATO:0001470] of total fiber cell cross-sectional area [PATO:0001323] to sapwood cross-sectional area. The fraction of a cross-section of sapwood comprised of fibres. It is calculated as the ratio of total fibre cross-sectional area to sapwood cross-sectional area. |
comments | |
value type | continuous variable |
unit |
mm2/mm2 square millimetre per square millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader |
vascular tissue morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic |
dimensionless ratio ratio; proportion per unit area cross section |
keyword |
sapwood plant fiber cell wood wood, secondary xylem |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Wood cross-sectional fraction of fibre area [TRY:3019] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013163 |
Wood ray parenchyma fraction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013164 |
alternative label | wood_ray_parenchyma_fraction |
description |
A vascular tissue morphology trait [TO:0000470] which is the fraction of a cross-section [NCIT:C63795] of sapwood [PO:0004513] comprised of ray secondary xylem parenchyma cells [PO:0004534], calculated as the ratio [PATO:0001470] of total ray parenchyma cross-sectional area [PATO:0001323] to sapwood cross-sectional area. The fraction of a cross-section of sapwood comprised of rays. It is calculated as the ratio of total ray cross-sectional area to sapwood cross-sectional area. |
comments | |
value type | continuous variable |
unit |
mm2/mm2 square millimetre per square millimetre |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader |
vascular tissue morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic |
dimensionless ratio ratio; proportion per unit area cross section |
keyword |
sapwood ray secondary xylem parenchyma wood wood, secondary xylem |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Wood cross-sectional fraction of wod ray area [TRY:3020] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | wood_ray_fraction |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013164 |
Wood tracheid fraction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0013165 |
alternative label | wood_tracheid_fraction |
description |
A vascular tissue morphology trait [TO:0000470] which is the fraction of a cross-section [NCIT:C63795] of sapwood [PO:0004513] comprised of tracheids [PO:0000301], calculated as the ratio [PATO:0001470] of total tracheid cross-sectional area [PATO:0001323] to sapwood cross-sectional area. The fraction of a cross-section of sapwood comprised of tracheids. It is calculated as the ratio of total tracheid cross-sectional area to sapwood cross-sectional area. |
comments | |
value type | continuous variable |
unit |
mm2/mm2 square millimetre per square millimetre |
minAllowedValue | 0 |
maxAllowedValue | 1 |
has broader |
vascular tissue morphology trait water transport trait, hydraulic trait stem morphology trait |
plant structure | stem |
measured characteristic |
dimensionless ratio ratio; proportion per unit area cross section |
keyword |
sapwood tracheids wood water transport wood, secondary xylem |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0013165 |
Leaf work to punch
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0014011 |
alternative label | leaf_work_to_punch |
description |
A leaf lamina [PO:0025060] strength [PATO:0001230] trait which is a measure of a leaf’s [PO:0025034] compressive strength [SWEET:propPressure/CompressiveStrength; MESH:D019245]. It is the force [PATO:0001035] (work) required to punch a hole in a leaf lamina (fracture [SWEET:phenSolid/Fracture]) with a punch and die. The force (work) required to punch a hole through a leaf lamina, generally with a punch and die. This is a measure of leaf compressive strength or toughness. |
comments | Variation in methods used will mean that, in some cases, values are not perfectly comparable across studies. The expected units for this trait are listed as N/m, which is identical to J/m2; Newtons are a unit of force, while Joules are a unit of work, indicating how much work (force per distance) is done when force is applied. |
value type | continuous variable |
unit |
N/m newton per metre |
minAllowedValue | 0.5 |
maxAllowedValue | 10000 |
has broader |
plant structure strength trait leaf morphology trait |
plant structure | leaf |
measured characteristic |
work force |
keyword |
leaf lamina strength compressive strength fracture punch |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | related match: Wood mechanical property: flexual stiffness, elasticity, rupture [TRY:1226] (https://www.try-db.org/de/de.php) |
references | Sanson 2001 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0014011 |
Leaf specific work to punch
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0014012 |
alternative label | leaf_work_to_punch_adjusted |
description |
A leaf lamina [PO:0025060] strength [PATO:0001230] trait which is a measure of a leaf’s [PO:0025034] compressive strength [SWEET:propPressure/CompressiveStrength; MESH:D019245]. It is the force [PATO:0001035] (work) required to punch a hole in a leaf lamina (fracture [SWEET:phenSolid/Fracture]) with a punch and die, scaled by leaf thickness [PATO:0000915]. The force (work) required to punch a hole through a leaf lamina, generally with a punch and die, adjusted for leaf thickness. This is a measure of leaf compressive strength or toughness. |
comments | Variation in methods used will mean that, in some cases, values are not perfectly comparable across studies. The expected units for this trait are listed as N/m2, which is identical to J/m3; Newtons are a unit of force, while Joules are a unit of work, indicating how much work (force per distance) is done when force is applied. |
value type | continuous variable |
unit | N/m2 |
minAllowedValue | 1000 |
maxAllowedValue | 3e+07 |
has broader |
plant structure strength trait leaf morphology trait |
plant structure | leaf |
measured characteristic |
work force ratio; proportion thickness |
keyword |
leaf lamina strength compressive strength fracture punch |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | related match: Wood mechanical property: flexual stiffness, elasticity, rupture [TRY:1226] (https://www.try-db.org/de/de.php) |
references | Sanson 2001 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0014012 |
Leaf work to shear
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0014013 |
alternative label | leaf_work_to_shear |
description |
A leaf lamina [PO:0025060] strength [PATO:0001230] trait which is a measure of a leaf’s [PO:0025034] compressive strength [SWEET:propPressure/CompressiveStrength; MESH:D019245]. It is the force [PATO:0001035] required to shear [SWEET:phenSolid/Shear] a leaf lamina with a pair of scissors. The force (work) required to shear a leaf. This is a measure of leaf compressive strength or toughness that is equivalent to cutting a leaf with scissors. |
comments | Variation in methods used will mean that, in some cases, values are not perfectly comparable across studies. The expected units for this trait, N is the same as J/m; Newtons are a unit of force, while Joules are a unit of work, indicating how much work (force per distance) is done when force is applied. |
value type | continuous variable |
unit |
N newton |
minAllowedValue | 0.01 |
maxAllowedValue | 10 |
has broader |
plant structure strength trait leaf morphology trait |
plant structure | leaf |
measured characteristic |
work force |
keyword |
leaf lamina strength compressive strength shear |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | related match: Wood mechanical property: flexual stiffness, elasticity, rupture [TRY:1226] (https://www.try-db.org/de/de.php) |
references | Sanson 2001 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0014013 |
Leaf specific work to shear (fracture toughness)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0014014 |
alternative label | leaf_work_to_shear_adjusted |
description |
A leaf lamina [PO:0025060] strength [PATO:0001230] trait which is a measure of a leaf’s [PO:0025034] compressive strength [SWEET:propPressure/CompressiveStrength; MESH:D019245]. It is the force [PATO:0001035] required to shear [SWEET:phenSolid/Shear] a leaf lamina with a pair of scissors, scaled by leaf thickness [PATO:0000915]. The force (work) required to shear a leaf, adjusted to leaf thickness; also referred to as ‘fracture toughness’. This is a measure of leaf compressive strength or toughness that is equivalent to cutting a leaf with scissors. |
comments | Variation in methods used will mean that, in some cases, values are not perfectly comparable across studies. The expected units for this trait, N/m is the same as J/m2; Newtons are a unit of force, while Joules are a unit of work, indicating how much work (force per distance) is done when force is applied. |
value type | continuous variable |
unit |
N/m newton per metre |
minAllowedValue | 100 |
maxAllowedValue | 10000 |
has broader |
plant structure strength trait leaf morphology trait |
plant structure | leaf |
measured characteristic |
work force ratio; proportion thickness |
keyword |
leaf lamina strength compressive strength shear |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
related match: Wood mechanical property: flexual stiffness, elasticity, rupture [TRY:1226] (https://www.try-db.org/de/de.php) exact match: Leaf lamina fracture toughness [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | Sanson 2001 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0014014 |
Leaf work to tear
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0014015 |
alternative label | leaf_work_to_tear |
description |
A leaf lamina [PO:0025060] strength [PATO:0001230] trait which is a measure of a leaf’s [PO:0025034] tensile strength [SWEET:propPressure/TensileStrength; MESH:D013718]. It is the force [PATO:0001035] required to tear or rip [SWEET:phenSolid/Rip] a leaf lamina. The force (work) required to tear/rip a leaf. This is a measure of leaf tensile strength. |
comments | Variation in methods used will mean that, in some cases, values are not perfectly comparable across studies. The expected units for this trait, N is the same as J/m; Newtons are a unit of force, while Joules are a unit of work, indicating how much work (force per distance) is done when force is applied. (Work to tear is also sometimes reported in J.) |
value type | continuous variable |
unit |
N newton |
minAllowedValue | 0.01 |
maxAllowedValue | 50 |
has broader |
plant structure strength trait leaf morphology trait |
plant structure | leaf |
measured characteristic |
work force |
keyword |
leaf lamina strength tensile strength rip, tear |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | related match: Wood mechanical property: flexual stiffness, elasticity, rupture [TRY:1226] (https://www.try-db.org/de/de.php) |
references | Sanson 2001 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0014015 |
Leaf specific work to tear
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0014016 |
alternative label | leaf_work_to_tear_adjusted |
description |
A leaf lamina [PO:0025060] strength [PATO:0001230] trait which is a measure of a leaf’s [PO:0025034] tensile strength [SWEET:propPressure/TensileStrength; MESH:D013718]. It is the force [PATO:0001035] required to tear or rip [SWEET:phenSolid/Rip] a leaf lamina, scaled by leaf thickness [PATO:0000915]. The force (work) required to tear/rip a leaf, adjusted to leaf thickness. This is a measure of leaf tensile strength. |
comments | Variation in methods used will mean that, in some cases, values are not perfectly comparable across studies. The expected units for this trait, N/m is the same as J/m2; Newtons are a unit of force, while Joules are a unit of work, indicating how much work (force per distance) is done when force is applied. |
value type | continuous variable |
unit |
N/m newton per metre |
minAllowedValue | 10 |
maxAllowedValue | 15000 |
has broader |
plant structure strength trait leaf morphology trait |
plant structure | leaf |
measured characteristic |
work force ratio; proportion thickness |
keyword |
leaf lamina strength tensile strength rip, tear |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | related match: Wood mechanical property: flexual stiffness, elasticity, rupture [TRY:1226] (https://www.try-db.org/de/de.php) |
references | Sanson 2001 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0014016 |
Bark modulus of elasticity
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0014017 |
alternative label | bark_modulus_of_elasticity |
description |
A bark [PO:0004518] physical quality [PATO:0002079] trait which is the bark’s modulus of elasticity [SWEET:propPressure/ModulusOfElasticity], its resistance to being deformed [SWEET:phenSolid/Deform] elastically [PATO:0001031] (non-permanently) when a force [PATO:0001035] is applied. It is calculated as the ratio of the force applied to bark per unit area (stress) to the bark’s deformation (bending). A measure of stem stiffness and elasticity, which is how much the bark is deformed elastically (bends) under stress. It is calculated as the ratio of the force applied to bark per unit area (stress) to the bark’s deformation (bending). The trait is also called Young’s modulus for bark. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | 10 |
maxAllowedValue | 1e+05 |
has broader |
plant structure strength trait bark morphology trait |
plant structure | bark |
measured characteristic |
work force |
keyword |
elasticity modulus of elasticity deform |
scope note | |
has exact match | |
has close match | |
has related match | osmotic adjustment capacity |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | modulus_of_elasticity_bark |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0014017 |
Stem modulus of elasticity
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0014018 |
alternative label | stem_modulus_of_elasticity |
description |
A stem [PO:0009047] physical quality [PATO:0002079] trait which is the stem’s modulus of elasticity [SWEET:propPressure/ModulusOfElasticity], its resistance to being deformed [SWEET:phenSolid/Deform] elastically [PATO:0001031] (non-permanently) when a force [PATO:0001035] is applied. It is calculated as the ratio of the force applied to wood per unit area (stress) to the stem’s deformation (bending). A measure of stem stiffness and elasticity, which is how much the stem is deformed elastically (bends) under stress. It is calculated as the ratio of the force applied to stem per unit area (stress) to the stem’s deformation (bending). This is the modulus of a compound tissue made up of bark and wood (or xylem) and potentially pith and could also be called structural modulus of elasticity. Trait is also called Young’s modulus for a stem. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | 10 |
maxAllowedValue | 1e+05 |
has broader |
plant structure strength trait stem morphology trait |
plant structure | stem |
measured characteristic |
work force |
keyword |
elasticity modulus of elasticity deform wood, secondary xylem |
scope note | |
has exact match | |
has close match | |
has related match | osmotic adjustment capacity |
examples | close match: Wood mechanical property: flexual stiffness, elasticity, rupture [TRY:1226] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | modulus_of_elasticity_stem |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0014018 |
Xylem modulus of elasticity
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0014019 |
alternative label | xylem_modulus_of_elasticity |
description |
A secondary xylem [PO:0005848] physical quality [PATO:0002079] trait which is the xylem’s modulus of elasticity [SWEET:propPressure/ModulusOfElasticity], its resistance to being deformed [SWEET:phenSolid/Deform] elastically [PATO:0001031] (non-permanently) when a force [PATO:0001035] is applied. A measure of wood stiffness and elasticity, which is how much wood (secondary xylem) is deformed elastically (bends) under stress. It is calculated as the ratio of the force applied to wood per unit area (stress) to the stem’s deformation (bending). This is the modulus of elasticity explicitly for xylem (wood). Trait is also called Young’s modulus for xylem. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | 10 |
maxAllowedValue | 1e+05 |
has broader |
plant structure strength trait stem morphology trait |
plant structure | stem |
measured characteristic |
work force |
keyword |
elasticity modulus of elasticity deform xylem wood, secondary xylem |
scope note | |
has exact match | |
has close match | |
has related match | osmotic adjustment capacity |
examples | close match: Wood mechanical property: flexual stiffness, elasticity, rupture [TRY:1226] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | modulus_of_elasticity_xylem |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0014019 |
Modulus of rupture
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0014020 |
alternative label | modulus_of_rupture |
description |
A secondary xylem [PO:0005848] physical quality [PATO:0002079] trait which is the xylem [PO:0005352] cell wall’s [GO:0009505] mechanical [MESH:D055595] bending strength [PATO:0001230], reported as the force [PATO:0001035] applied to a stem [PO:0009047] that causes it to stop bending and break (fail). A measure of wood bending strength, which is the force per unit surface area applied to a length of bent stem (surface stress) that causes it to break. This is also the force required to rupture xylem vessels. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | 1 |
maxAllowedValue | 10000 |
has broader |
plant structure strength trait stem morphology trait |
plant structure | stem |
measured characteristic |
pressure force strength |
keyword |
xylem plant-type cell wall water stress trait wood, secondary xylem |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Wood mechanical property: flexual stiffness, elasticity, rupture [TRY:1226] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0014020 |
Plant photosynthetic pathway
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020221 |
alternative label | photosynthetic_pathway |
description |
The photosynthetic pathway, or biochemical reaction [NCIT:C19899], used by a plant to convert carbon dioxide [ENVO:01000451] into carbohydrates [CHEBI:16646], with options being C3 photosynthesis [GO:0019253], C4 photosynthesis [GO:0009760], and CAM photosynthesis [GO:0009761]. Type of photosynthetic pathway displayed by a plant. |
comments | |
value type | categorical variable |
has narrower |
photosynthetic_pathway_c3 Plant using the ‘standard’ photosynthetic pathway, where a 3-carbon compound is produced after the first stage in the photosynthetic pathway. photosynthetic_pathway_c4 Plants in which the photosynthetic light-dependent reactions and the Calvin cycle are physically separated to reduce photorespiration. photosynthetic_pathway_c3-c4 Taxa that shift between C3 and C4 photosynthesis. photosynthetic_pathway_cam Plants which display crassulacean acid metabolism. photosynthetic_pathway_c3-cam Taxa that shift between C3 and cam photosynthesis. photosynthetic_pathway_c4-cam Taxa that shift between C4 and cam photosynthesis. photosynthetic_pathway_facultative_cam Species that shifts between C3 and CAM photosynthesis depending on water availability. photosynthetic_pathway_unknown Photosynthetic pathway is unknown. (This trait value should be used if the photosynthetic pathway is assessed but unknown, not to record a lack of data.) |
has broader | photosynthetic trait |
plant structure plant structure |
whole plant leaf |
measured characteristic | organismal quality |
keyword |
Calvin cycle; C3 photosynthesis (reductive pentose-phosphate cycle C4 photosynthesis CAM photosynthesis biochemical reaction photosynthesis, dark reaction photosynthesis |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Photosynthesis pathway [TRY:22] (https://www.try-db.org/de/de.php) exact match: Photosynthetic_pathway [GIFT:4.2.1] (https://gift.uni-goettingen.de) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020221 |
Bark photosynthesis
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020222 |
alternative label | bark_photosynthetic_status |
description |
A photosynthetic trait [TO:0001015] which indicates whether a plant’s bark [PO:0004518] does or does not have a photosynthetic rate greater than zero. Binary variable indicating whether bark is photosynthetic. |
comments | |
value type | categorical variable |
has narrower |
bark_photosynthetic_status_non_photosynthetic_bark Plant’s bark is not photosynthetic. bark_photosynthetic_status_photosynthetic_bark Plant’s bark is photosynthetic. |
has broader | photosynthetic rate trait |
plant structure | bark |
measured characteristic | organismal quality |
keyword |
photosynthetic rate biochemical reaction |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by | no reviewers |
change note | photosynthetic_bark |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020222 |
Leaf photosynthesis rate per unit leaf area under ambient light and CO2 (A)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020240 |
alternative label | leaf_photosynthetic_rate_per_area_ambient |
description |
The photosynthetic rate [TO:0001015] of plant leaves [PO:0025034] exposed to ambient [NCIT:C62306] photosynthetically active radiation [ENVO:01001864] levels and ambient atmospheric carbon dioxide [ENVO:01000451; CHEBI:16526] concentrations [PATO:0000033], recorded per unit leaf area [PATO:0001323]. The photosynthetic rate of a leaf exposed to ambient light (photosynthetically active radiation) levels and ambient carbon dioxide concentrations, air temperature and vapour pressure deficit, per unit leaf area. |
comments | Leaf temperature and leaf-to-air vapour pressure deficit should be recorded as context properties. If Tleaf and VPD are not reported, it is assumed measurements are made at typical temperature and VPD conditions for the plant. |
value type | continuous variable |
unit |
umol{CO2}/m2/s micromole per square metre second |
minAllowedValue | 0.01 |
maxAllowedValue | 40 |
has broader | photosynthetic rate trait |
plant structure | leaf |
measured characteristic |
reaction rate per unit area rate |
keyword |
photosynthetic rate photosystem photosynthetically active radiation carbon dioxide biochemical reaction ambient photosynthetic rate |
scope note | |
has exact match | Photosynthetic rate |
has close match |
photosynthetic rate photosynthetic rate |
has related match | |
examples |
close match: Leaf photosynthetic rate per leaf area [TOP357] (https://top-thesaurus.org/index) close match: Photosynthesis rate per leaf area [TRY:53] (https://www.try-db.org/de/de.php) exact match: leaf photosynthetic rate per leaf area [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references |
Pérez-Harguindeguy 2013 Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | photosynthetic_rate_per_area_ambient |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020240 |
Leaf photosynthesis rate per unit leaf area under saturating light and CO2 (Amax)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020241 |
alternative label | leaf_photosynthetic_rate_per_area_maximum |
description |
The photosynthetic rate [TO:0001015] of plant leaves [PO:0025034] whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are exposed to saturating [NCIT:C61427] photosynthetically active radiation [ENVO:01001864] and saturating atmospheric carbon dioxide [ENVO:01000451; CHEBI:16526] concentrations [PATO:0000033], recorded per unit leaf area [PATO:0001323]. The photosynthetic rate of a leaf exposed to saturating light (photosynthetically active radiation) levels and saturating carbon dioxide concentrations, at optimal leaf temperature and VPD conditions, per unit leaf area; maximum photosynthetic rate. |
comments | Leaf temperature and leaf-to-air vapour pressure deficit should be recorded as context properties. If Tleaf and VPD are not reported, it is assumed measurements are made at typical temperature and VPD conditions for the plant. |
value type | continuous variable |
unit |
umol{CO2}/m2/s micromole per square metre second |
minAllowedValue | 0.01 |
maxAllowedValue | 65 |
has broader | photosynthetic rate trait |
plant structure | leaf |
measured characteristic |
reaction rate per unit area rate |
keyword |
photosynthetic rate photosystem photosynthetically active radiation carbon dioxide biochemical reaction maximum photosynthetic rate, Amax |
scope note | |
has exact match | Photosynthetic rate |
has close match |
photosynthetic rate photosynthetic rate |
has related match | |
examples |
close match: Leaf photosynthetic rate per leaf area [TOP357] (https://top-thesaurus.org/index) close match: Photosynthesis rate per leaf area [TRY:53] (https://www.try-db.org/de/de.php) exact match: leaf photosynthetic rate per leaf area [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references |
Pérez-Harguindeguy 2013 Ely 2021 |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | photosynthetic_rate_per_area_maximum |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020241 |
Leaf photosynthesis rate per unit leaf area under saturating light and ambient CO2 (Asat)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020242 |
alternative label | leaf_photosynthetic_rate_per_area_saturated |
description |
The photosynthetic rate [TO:0001015] of plant leaves [PO:0025034] whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are exposed to saturating [NCIT:C61427] photosynthetically active radiation [ENVO:01001864] and ambient [NCIT:C62306] atmospheric carbon dioxide [ENVO:01000451; CHEBI:16526] concentrations [PATO:0000033], recorded per unit leaf area [PATO:0001323]. The photosynthetic rate of a leaf exposed to saturating light (photosynthetically active radiation) levels and ambient carbon dioxide concentrations, air temperature and vapour pressure deficit, per unit leaf area; light-saturated photosynthetic rate. |
comments | Leaf temperature and leaf-to-air vapour pressure deficit should be recorded as context properties. If Tleaf and VPD are not reported, it is assumed measurements are made at typical temperature and VPD conditions for the plant. |
value type | continuous variable |
unit |
umol{CO2}/m2/s micromole per square metre second |
minAllowedValue | 0.01 |
maxAllowedValue | 65 |
has broader | photosynthetic rate trait |
plant structure | leaf |
measured characteristic |
reaction rate per unit area rate |
keyword |
photosynthetic rate photosystem photosynthetically active radiation carbon dioxide biochemical reaction saturated photosynthetic rate, Asat |
scope note | |
has exact match | Photosynthetic rate |
has close match |
photosynthetic rate photosynthetic rate |
has related match | |
examples |
close match: Leaf photosynthetic rate per leaf area [TOP357] (https://top-thesaurus.org/index) close match: Photosynthesis rate per leaf area [TRY:53] (https://www.try-db.org/de/de.php) exact match: leaf photosynthetic rate per leaf area [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references |
Pérez-Harguindeguy 2013 Ely 2021 |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | photosynthetic_rate_per_area_saturated |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020242 |
Leaf photosynthesis rate per unit leaf dry mass under ambient light and CO2 (A)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020243 |
alternative label | leaf_photosynthetic_rate_per_dry_mass_ambient |
description |
The photosynthetic rate [TO:0001015] of plant leaves [PO:0025034] exposed to ambient [NCIT:C62306] photosynthetically active radiation [ENVO:01001864] levels and ambient atmospheric carbon dioxide [ENVO:01000451; CHEBI:16526] concentrations [PATO:0000033], recorded per unit leaf dry mass [TO:0001014]. The photosynthetic rate of a leaf exposed to ambient light (photosynthetically active radiation) levels and ambient carbon dioxide concentrations, at ambient carbon dioxide concentrations, air temperature and vapour pressure deficit, per unit leaf dry mass. |
comments | Leaf temperature and leaf-to-air vapour pressure deficit should be recorded as context properties. If Tleaf and VPD are not reported, it is assumed measurements are made at typical temperature and VPD conditions for the plant. |
value type | continuous variable |
unit |
umol{CO2}/g/s micromole per gram second |
minAllowedValue | 0.001 |
maxAllowedValue | 0.8 |
has broader | photosynthetic rate trait |
plant structure | leaf |
measured characteristic |
reaction rate rate |
keyword |
photosynthetic rate photosystem photosynthetically active radiation carbon dioxide biochemical reaction ambient photosynthetic rate |
scope note | |
has exact match | |
has close match |
Photosynthetic rate photosynthetic rate photosynthetic rate |
has related match | |
examples |
close match: Leaf photosynthetic rate per leaf dry mass [TOP359] (https://top-thesaurus.org/index) close match: Photosynthesis rate per leaf dry mass [TRY:40] (https://www.try-db.org/de/de.php) exact match: leaf photosynthetic rate per leaf dry mass [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references |
Pérez-Harguindeguy 2013 Ely 2021 |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | photosynthetic_rate_per_dry_mass_ambient |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020243 |
Leaf photosynthesis rate per unit leaf dry mass under saturating light and CO2 (Amax)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020244 |
alternative label | leaf_photosynthetic_rate_per_dry_mass_maximum |
description |
The photosynthetic rate [TO:0001015] of plant leaves [PO:0025034] whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are exposed to saturating [NCIT:C61427] photosynthetically active radiation [ENVO:01001864] and saturating atmospheric carbon dioxide [ENVO:01000451; CHEBI:16526] concentrations [PATO:0000033], recorded per unit leaf dry mass [TO:0001014]. The photosynthetic rate of a leaf exposed to saturating light (photosynthetically active radiation) levels and saturating carbon dioxide concentrations, at optimal leaf temperature and VPD conditions, per unit leaf dry mass; maximum photosynthetic rate. |
comments | Leaf temperature and leaf-to-air vapour pressure deficit should be recorded as context properties. If Tleaf and VPD are not reported, it is assumed measurements are made at typical temperature and VPD conditions for the plant. |
value type | continuous variable |
unit |
umol{CO2}/g/s micromole per gram second |
minAllowedValue | 0.001 |
maxAllowedValue | 1 |
has broader | photosynthetic rate trait |
plant structure | leaf |
measured characteristic |
reaction rate rate |
keyword |
photosynthetic rate photosystem photosynthetically active radiation carbon dioxide biochemical reaction maximum photosynthetic rate, Amax |
scope note | |
has exact match | |
has close match |
Photosynthetic rate photosynthetic rate photosynthetic rate |
has related match | |
examples |
close match: Leaf photosynthetic rate per leaf dry mass [TOP359] (https://top-thesaurus.org/index) close match: Photosynthesis rate per leaf dry mass [TRY:40] (https://www.try-db.org/de/de.php) exact match: leaf photosynthetic rate per leaf dry mass [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references |
Pérez-Harguindeguy 2013 Ely 2021 Field & Mooney 1986 |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | photosynthetic_rate_per_dry_mass_maximum |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020244 |
Leaf photosynthesis rate per unit leaf dry mass under saturating light and ambient CO2 (Asat)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020245 |
alternative label | leaf_photosynthetic_rate_per_dry_mass_saturated |
description |
The photosynthetic rate [TO:0001015] of plant leaves [PO:0025034] whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are exposed to saturating [NCIT:C61427] photosynthetically active radiation [ENVO:01001864] and ambient [NCIT:C62306] atmospheric carbon dioxide [ENVO:01000451; CHEBI:16526] concentrations [PATO:0000033], recorded per unit leaf dry mass [TO:0001014]. The photosynthetic rate of a leaf exposed to saturating light (photosynthetically active radiation) levels and ambient carbon dioxide concentrations, air temperature and vapour pressure deficit, per unit leaf dry mass; saturated photosynthetic rate. |
comments | Leaf temperature and leaf-to-air vapour pressure deficit should be recorded as context properties. If Tleaf and VPD are not reported, it is assumed measurements are made at typical temperature and VPD conditions for the plant. |
value type | continuous variable |
unit |
umol{CO2}/g/s micromole per gram second |
minAllowedValue | 0.001 |
maxAllowedValue | 1 |
has broader | photosynthetic rate trait |
plant structure | leaf |
measured characteristic |
reaction rate rate |
keyword |
photosynthetic rate photosystem photosynthetically active radiation carbon dioxide biochemical reaction saturated photosynthetic rate, Asat |
scope note | |
has exact match | |
has close match |
Photosynthetic rate photosynthetic rate photosynthetic rate |
has related match | |
examples |
close match: Leaf photosynthetic rate per leaf dry mass [TOP359] (https://top-thesaurus.org/index) close match: Photosynthesis rate per leaf dry mass [TRY:40] (https://www.try-db.org/de/de.php) exact match: leaf photosynthetic rate per leaf dry mass [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references |
Pérez-Harguindeguy 2013 Ely 2021 Field & Mooney 1986 |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | photosynthetic_rate_per_dry_mass_saturated |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020245 |
Leaf internal CO2 concentration during Amax measurement (ci)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020310 |
alternative label | leaf_intercellular_CO2_concentration_at_Amax |
description |
The intercellular space [PO:0025379] carbon dioxide [CHEBI:16526] concentration [PATO:0000033] of plant leaves [PO:0025034] whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are exposed to saturating [NCIT:C61427] photosynthetically active radiation [ENVO:01001864] and saturating atmospheric carbon dioxide [ENVO:01000451] concentrations. The CO2 concentration in intercellular (interstitial) spaces in a leaf exposed to saturating light (photosynthetically active radiation) levels and saturating carbon dioxide concentrations; ci. |
comments | Leaf temperature and leaf-to-air vapour pressure deficit should be recorded as context properties. If Tleaf and VPD are not reported, it is assumed measurements are made at typical temperature and VPD conditions for the plant. |
value type | continuous variable |
unit |
umol{CO2}/mol micromole per mole |
minAllowedValue | 10 |
maxAllowedValue | 1800 |
has broader | carbon dioxide concentration trait |
plant structure | leaf |
measured characteristic |
concentration mass fraction ratio; proportion |
keyword |
intercellular space carbon dioxide maximum photosynthetic rate, Amax |
scope note | |
has exact match | Internal CO2 concentration |
has close match | |
has related match | |
examples | close match: Photosynthesis A/Ci curve: intercellular CO2 concentration [TRY:3366] (https://www.try-db.org/de/de.php) |
references | Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | ci_at_Amax |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020310 |
Internal CO2 concentration during Asat measurement (ci)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020311 |
alternative label | leaf_intercellular_CO2_concentration_at_Asat |
description |
The intercellular space [PO:0025379] carbon dioxide [CHEBI:16526] concentration [PATO:0000033] of plant leaves [PO:0025034] whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are exposed to saturating [NCIT:C61427] photosynthetically active radiation [ENVO:01001864] and ambient atmospheric carbon dioxide [ENVO:01000451] concentrations. The CO2 concentration in intercellular (interstitial) spaces in a leaf exposed to saturating light (photosynthetically active radiation) levels and ambient carbon dioxide concentrations; ci. |
comments | Leaf temperature and leaf-to-air vapour pressure deficit should be recorded as context properties. If Tleaf and VPD are not reported, it is assumed measurements are made at typical temperature and VPD conditions for the plant. |
value type | continuous variable |
unit |
umol{CO2}/mol micromole per mole |
minAllowedValue | 10 |
maxAllowedValue | 1300 |
has broader | carbon dioxide concentration trait |
plant structure | leaf |
measured characteristic |
concentration mass fraction ratio; proportion |
keyword |
intercellular space carbon dioxide saturated photosynthetic rate, Asat |
scope note | |
has exact match | Internal CO2 concentration |
has close match | |
has related match | |
examples | close match: Photosynthesis A/Ci curve: intercellular CO2 concentration [TRY:3366] (https://www.try-db.org/de/de.php) |
references | Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | ci_at_Asat |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020311 |
Internal CO2 concentration under ambient conditions (ci)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020312 |
alternative label | leaf_intercellular_CO2_concentration_at_Aambient |
description |
The intercellular space [PO:0025379] carbon dioxide [CHEBI:16526] concentration [PATO:0000033] of plant leaves [PO:0025034] exposed to ambient [NCIT:C62306] photosynthetically active radiation [ENVO:01001864] levels and ambient atmospheric carbon dioxide [ENVO:01000451] concentrations. The CO2 concentration in intercellular (interstitial) spaces in a leaf exposed to ambient light (photosynthetically active radiation) levels and ambient carbon dioxide concentrations; ci. |
comments | Leaf temperature and leaf-to-air vapour pressure deficit should be recorded as context properties. If Tleaf and VPD are not reported, it is assumed measurements are made at typical temperature and VPD conditions for the plant. |
value type | continuous variable |
unit |
umol{CO2}/mol micromole per mole |
minAllowedValue | 10 |
maxAllowedValue | 1300 |
has broader | carbon dioxide concentration trait |
plant structure | leaf |
measured characteristic |
concentration mass fraction ratio; proportion |
keyword |
intercellular space carbon dioxide ambient photosynthetic rate |
scope note | |
has exact match | Internal CO2 concentration |
has close match | |
has related match | |
examples | close match: Photosynthesis A/Ci curve: intercellular CO2 concentration [TRY:3366] (https://www.try-db.org/de/de.php) |
references | Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | ci_at_ambient |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020312 |
Ratio of internal to external CO2 concentrations (ci/ca)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020313 |
alternative label | leaf_intercellular_CO2_concentration_to_atmospheric_CO2_concentration_ratio |
description |
The ratio [PATO:0001470] of leaf [PO:0025034] intercellular space [PO:0025379] carbon dioxide [CHEBI:16526] concentration [PATO:0000033] to atmospheric carbon dioxide [ENVO:01000451] concentration. The ratio of the CO2 concentration in intercellular (interstitial) spaces in leaves to the atmospheric CO2 concentration, an indication of stomatal conductance; ci/ca. |
comments | |
value type | continuous variable |
unit |
umol{CO2_internal}/umol{CO2_ambient} micromole per micromole |
minAllowedValue | 0.001 |
maxAllowedValue | 1.3 |
has broader | carbon dioxide concentration trait |
plant structure | leaf |
measured characteristic |
concentration mass fraction ratio; proportion |
keyword |
intercellular space carbon dioxide cell atmospheric carbon dioxide |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Photosynthesis: intercellular CO2 concentration to ambient CO2 (ci/ca) [TRY:3379] (https://www.try-db.org/de/de.php) |
references |
Ely 2021 Wong 1979 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | ci_over_ca |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020313 |
CO2 concentration inside chloroplasts (cc)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020314 |
alternative label | leaf_chloroplast_CO2_concentration |
description |
The concentration [PATO:0000033] of carbon dioxide [ENVO:01000451] inside chloroplasts [GO:0009507] in leaves [PO:0025034]. CO2 concentration inside chloroplasts in leaves; cc. |
comments | |
value type | continuous variable |
unit |
umol{CO2}/umol micromole per micromole |
minAllowedValue | 10 |
maxAllowedValue | 1000 |
has broader | carbon dioxide concentration trait |
plant structure | leaf |
measured characteristic |
concentration mass fraction ratio; proportion |
keyword |
carbon dioxide chloroplast cell |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Photosynthesis CO2 concentration at chloroplast [TRY:3007] (https://www.try-db.org/de/de.php) |
references | Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | cc |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020314 |
Ambient CO2 concentration (ca)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020315 |
alternative label | atmospheric_CO2_concentration |
description |
The atmospheric carbon dioxide [ENVO:01000451] concentration [PATO:0000033]. Atmospheric CO2 concentration (external CO2 concentration); ca. |
comments | This is not a trait itself, but will often be used to calculate traits related to photosynthetic rates and therefore is recorded. |
value type | continuous variable |
unit |
umol{CO2}/mol micromole per mole |
minAllowedValue | 50 |
maxAllowedValue | 2000 |
has broader | carbon dioxide concentration trait |
plant structure | leaf |
measured characteristic |
concentration mass fraction ratio; proportion |
keyword |
atmospheric carbon dioxide carbon dioxide |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | ca |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020315 |
Leaf Jmax per unit leaf area (Jmax)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020410 |
alternative label | leaf_photosynthesis_Jmax_per_area |
description |
Maximum [NCIT:C25564] electron transport [MESH:D004579] rate [PATO:0000161] through the photosynthetic [GO:0015979] electron transport chain [GO:0022900], recorded per unit leaf [PO:0025034] area [PATO:0001323]. The value is a model parameter [STATO:0000034] derived from the portion of the photosynthesis A-ci response curve at high carbon dioxide concentrations where ATP and NADPH production by the light reactions [GO:0019684] limits the rate of carboxylation [MOP:0000591]. The maximum potential photosynthetic electron transport rate, recorded per unit leaf area. This is a model-derived value, calculated from the portion of an A-ci response curve (curve showing the photosynthetic response to increasing carbon dioxide concentrations) at high carbon dioxide concentrations. This is the portion of the curve where the photosynthetic rate is limited by the rate of ATP and NADPH production by the light reactions. |
comments |
This trait is explicitly for Jmax per leaf area measurements made at a temperature other than 25 deg C. It is essential to record measurement temperature as a context property as Jmax is very sensitive to changes in temperature. Measurements made at 25 deg C should be mapped to leaf_photosynthesis_Jmax_per_area_25C
|
value type | continuous variable |
unit |
umol{CO2}/m2/s micromole per square metre second |
minAllowedValue | 10 |
maxAllowedValue | 800 |
has broader | photosystem performance trait |
plant structure | leaf |
measured characteristic |
reaction rate model parameter enzyme activity rate per unit area |
keyword |
carboxylation photosynthesis Models, Theoretical biochemical reaction carbon dioxide |
scope note | |
has exact match | Leaf electron transport rate |
has close match | |
has related match | |
examples | exact match: Photosynthesis electron transport capacity (Jmax) per leaf area (Farquhar model) [TRY:269] (https://www.try-db.org/de/de.php) |
references |
Farquhar 1980 Medlyn 2002 Evans 2010 Ely 2021 Von Caemmerer 2000 |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | Jmax_per_area; leaf_fluorescence_Jmax_per_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020410 |
Leaf Jmax per unit leaf area at 25 deg C (Jmax25)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020411 |
alternative label | leaf_photosynthesis_Jmax_per_area_25C |
description |
Maximum [NCIT:C25564] electron transport [MESH:D004579] rate [PATO:0000161] through the photosynthetic [GO:0015979] electron transport chain [GO:0022900], recorded per unit leaf [PO:0025034] area [PATO:0001323] and measured at 25 Celsius. The value is a model parameter [STATO:0000034] derived from the portion of the photosynthesis A-ci response curve at high carbon dioxide concentrations where ATP and NADPH production by the light reactions [GO:0019684] limits the rate of carboxylation [MOP:0000591]. The maximum potential photosynthetic electron transport rate, measured at 25 Celsius and recorded per unit leaf area. This is a model-derived value, calculated from the portion of an A-ci response curve (curve showing the photosynthetic response to increasing carbon dioxide concentrations) at high carbon dioxide concentrations. This is the portion of the curve where the photosynthetic rate is limited by the rate of ATP and NADPH production by the light reactions. |
comments |
This trait is explicitly for Jmax per leaf area measurements made at a temperature of 25 deg C. Measurements made at other temperatures should be mapped to leaf_photosynthesis_Jmax_per_area
|
value type | continuous variable |
unit |
umol{CO2}/m2/s micromole per square metre second |
minAllowedValue | 35 |
maxAllowedValue | 800 |
has broader | photosystem performance trait |
plant structure | leaf |
measured characteristic |
reaction rate model parameter enzyme activity rate per unit area |
keyword |
carboxylation photosynthesis Models, Theoretical biochemical reaction carbon dioxide |
scope note | |
has exact match | Leaf electron transport rate |
has close match | |
has related match | |
examples | exact match: Photosynthesis electron transport capacity (Jmax) per leaf area (Farquhar model) [TRY:269] (https://www.try-db.org/de/de.php) |
references |
Farquhar 1980 Medlyn 2002 Evans 2010 Ely 2021 Von Caemmerer 2000 |
date created | 29/03/2023 |
date modified | 03/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | Jmax_per_area; leaf_fluorescence_Jmax_per_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020411 |
Leaf Jmax per unit leaf mass (Jmax)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020412 |
alternative label | leaf_photosynthesis_Jmax_per_mass |
description |
Maximum [NCIT:C25564] electron transport [MESH:D004579] rate [PATO:0000161] through the photosynthetic [GO:0015979] electron transport chain [GO:0022900], recorded per unit leaf [PO:0025034] mass [PATO:0000125]. The value is a model parameter [STATO:0000034] derived from the portion of the photosynthesis A-ci response curve at high carbon dioxide concentrations where ATP and NADPH production by the light reactions [GO:0019684] limits the rate of carboxylation [MOP:0000591]. The maximum potential photosynthetic electron transport rate, recorded per unit leaf mass. This is a model-derived value, calculated from the portion of an A-ci response curve (curve showing the photosynthetic response to increasing carbon dioxide concentrations) at high carbon dioxide concentrations. This is the portion of the curve where the photosynthetic rate is limited by the rate of ATP and NADPH production by the light reactions. |
comments | Jmax values are very dependent on leaf temperature, so leaf temperature needs to be included as a context property. |
value type | continuous variable |
unit |
umol{CO2}/g/s micromole per gram second |
minAllowedValue | 0 |
maxAllowedValue | 3 |
has broader | photosystem performance trait |
plant structure | leaf |
measured characteristic |
reaction rate model parameter enzyme activity rate |
keyword |
carboxylation photosynthesis Models, Theoretical biochemical reaction carbon dioxide |
scope note | |
has exact match | |
has close match | Leaf electron transport rate |
has related match | |
examples | exact match: Photosynthesis electron transport capacity (Jmax) per leaf area (Farquhar model) [TRY:269] (https://www.try-db.org/de/de.php) |
references |
Farquhar 1980 Evans 2010 Ely 2021 Von Caemmerer 2000 |
date created | 29/03/2023 |
date modified | 03/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020412 |
Leaf Vcmax per unit leaf area (Vcmax)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020413 |
alternative label | leaf_photosynthesis_Vcmax_per_area |
description |
Maximum [NCIT:C25564] carboxylation [MOP:0000591] rate [PATO:0000161] by the Rubisco complex [GO:0048492] in plant leaves [PO:0025034], recorded per unit leaf [PO:0025034] area [PATO:0001323]. The value is a model parameter [STATO:0000034] derived from the initial slope of a photosynthesis [GO:0015979] A-ci response curve, the component that is carbon dioxide [CHEBI:16526] limited and hence limited by Rubisco activity. The apparent maximum rate of Rubisco (ribulose 1,5-bisphosphate carboxylase/oxygenase) activity carboxylase activity (carboxylation capacity), recorded per unit leaf dry mass. This is a model-derived value, calculated from the portion of an A-ci response curve (curve showing the photosynthetic response to increasing carbon dioxide concentrations) at low carbon dioxide concentrations. This is the portion of the curve where the photosynthetic rate is limited by the Rubisco activity. |
comments |
This trait is explicitly for Vcmax per leaf area measurements made at a temperature other than 25 deg C. It is essential to record measurement temperature as a context property as Vcmax is very sensitive to changes in temperature. Measurements made at 25 deg C should be mapped to leaf_photosynthesis_Vcmax_per_area_25C
|
value type | continuous variable |
unit |
umol{CO2}/m2/s micromole per square metre second |
minAllowedValue | 10 |
maxAllowedValue | 300 |
has broader | photosystem performance trait |
plant structure | leaf |
measured characteristic |
reaction rate model parameter enzyme activity rate per unit area |
keyword |
carboxylation photosynthesis Models, Theoretical biochemical reaction photosynthesis, dark reaction rubisco complex, ribulose bisphosphate carboxylase complex carbon dioxide |
scope note | |
has exact match | Instantaneous carboxylation efficiency |
has close match | |
has related match | |
examples | exact match: Photosynthesis carboxylation capacity (Vcmax) per leaf area (Farquhar model) [TRY:186] (https://www.try-db.org/de/de.php) |
references |
Farquhar 1980 Medlyn 2002 Evans 2010 Ely 2021 Ellsworth 2022 |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | Vcmax_per_area; leaf_fluorescence_Vcmax_per_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020413 |
Leaf Vcmax per unit leaf area at 25 deg C (Vcmax25)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020414 |
alternative label | leaf_photosynthesis_Vcmax_per_area_25C |
description |
Maximum [NCIT:C25564] carboxylation [MOP:0000591] rate [PATO:0000161] by the Rubisco complex [GO:0048492] in plant leaves [PO:0025034], recorded per unit leaf [PO:0025034] area [PATO:0001323] and measured at 25 Celsius. The value is a model parameter [STATO:0000034] derived from the initial slope of a photosynthesis [GO:0015979] A-ci response curve, the component that is carbon dioxide [CHEBI:16526] limited and hence limited by Rubisco activity. The apparent maximum rate of Rubisco (ribulose 1,5-bisphosphate carboxylase/oxygenase) activity carboxylase activity (carboxylation capacity), measured at 25 Celsius and recorded per unit leaf area. This is a model-derived value, calculated from the portion of an A-ci response curve (curve showing the photosynthetic response to increasing carbon dioxide concentrations) at low carbon dioxide concentrations. This is the portion of the curve where the photosynthetic rate is limited by the Rubisco activity. |
comments |
This trait is explicitly for Vcmax per leaf area measurements made at a temperature of 25 deg C. Measurements made at other temperatures should be mapped to leaf_photosynthesis_Vcmax_per_area
|
value type | continuous variable |
unit |
umol{CO2}/m2/s micromole per square metre second |
minAllowedValue | 10 |
maxAllowedValue | 300 |
has broader | photosystem performance trait |
plant structure | leaf |
measured characteristic |
reaction rate model parameter enzyme activity rate per unit area |
keyword |
carboxylation photosynthesis Models, Theoretical biochemical reaction photosynthesis, dark reaction rubisco complex, ribulose bisphosphate carboxylase complex carbon dioxide |
scope note | |
has exact match | Instantaneous carboxylation efficiency |
has close match | |
has related match | |
examples | exact match: Photosynthesis carboxylation capacity (Vcmax) per leaf area (Farquhar model) [TRY:186] (https://www.try-db.org/de/de.php) |
references |
Farquhar 1980 Medlyn 2002 Evans 2010 Ely 2021 Ellsworth 2022 |
date created | 29/03/2023 |
date modified | 03/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | Vcmax_per_area; leaf_fluorescence_Vcmax_per_area |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020414 |
Leaf Vcmax per unit leaf mass (Vcmax)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020415 |
alternative label | leaf_photosynthesis_Vcmax_per_mass |
description |
Maximum [NCIT:C25564] carboxylation [MOP:0000591] rate [PATO:0000161] by the Rubisco complex [GO:0048492] in plant leaves [PO:0025034], recorded per unit leaf [PO:0025034] mass [PATO:0000125]. The value is a model parameter [STATO:0000034] derived from the initial slope of a photosynthesis [GO:0015979] A-ci response curve, the component that is carbon dioxide [CHEBI:16526] limited and hence limited by Rubisco activity. The apparent maximum rate of Rubisco (ribulose 1,5-bisphosphate carboxylase/oxygenase) activity carboxylase activity (carboxylation capacity), recorded per unit leaf mass. This is a model-derived value, calculated from the portion of an A-ci response curve (curve showing the photosynthetic response to increasing carbon dioxide concentrations) at low carbon dioxide concentrations. This is the portion of the curve where the photosynthetic rate is limited by the Rubisco activity. |
comments | Vcmax values are very dependent on leaf temperature, so leaf temperature needs to be included as a context property. |
value type | continuous variable |
unit |
umol{CO2}/g/s micromole per gram second |
minAllowedValue | 0 |
maxAllowedValue | 2 |
has broader | photosystem performance trait |
plant structure | leaf |
measured characteristic |
reaction rate model parameter enzyme activity rate |
keyword |
carboxylation photosynthesis Models, Theoretical biochemical reaction photosynthesis, dark reaction rubisco complex, ribulose bisphosphate carboxylase complex carbon dioxide |
scope note | |
has exact match | |
has close match | Instantaneous carboxylation efficiency |
has related match | |
examples | exact match: Photosynthesis carboxylation capacity (Vcmax) per leaf area (Farquhar model) [TRY:186] (https://www.try-db.org/de/de.php) |
references |
Farquhar 1980 Medlyn 2002 Evans 2010 Ely 2021 Ellsworth 2022 |
date created | 29/03/2023 |
date modified | 03/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020415 |
Leaf Jmax to leaf Vcmax ratio at 25 deg C
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020416 |
alternative label | leaf_photosynthesis_Jmax_over_Vcmax_25C |
description |
The ratio [PATO:0001470] of a leaf’s [PO:0025034] maximum [NCIT:C25564] electron transport [MESH:D004579] rate [PATO:0000161] to its maximum carboxylation [MOP:0000591] rate, reflecting the trade-off between photosynthetic gain and costs of excess energy dissipation, with the ratio affected by temperature, photosynthetically active radiation [ENVO:01001864] (light), and carbon dioxide [CHEBI:16526] concentration. These are both model parameters [STATO:0000034] derived from a photosynthesis [GO:0015979] A-ci response curve. Ratio of photosynthetic electron transport capacity (Jmax) to maximum Rubisco activity (carboxylation capacity) (Vcmax). These are model-derived parameters, calculated from an A-ci response curve, reflecting, respectively the component of the curve where photosynthetic rates are limited by the light reactions versus low carbon dioxide concentrations. |
comments | |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 1 |
maxAllowedValue | 5 |
has broader | photosystem performance trait |
plant structure | leaf |
measured characteristic |
reaction rate model parameter enzyme activity rate dimensionless ratio |
keyword |
carboxylation photosynthesis Models, Theoretical biochemical reaction photosynthesis, dark reaction rubisco complex, ribulose bisphosphate carboxylase complex carbon dioxide electron transport chain |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Farquhar 1980 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | fluorescence_Jmax_over_Vcmax; leaf_fluorescence_Jmax_over_Vcmax |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020416 |
Leaf maximum quantum yield (Fv/Fm)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020417 |
alternative label | leaf_fluorescence_fv_over_fm |
description |
Maximum [NCIT:C25564] quantum yield [TO:0012004] of photosystem II [GO:0009539], as determined through chlorophyll fluorescence [GO:0090546]. Quantum yield is the ratio [PATO:0001470] of photons [NCIT:C88112] absorbed to photons emitted [SIO:000384] through fluorescence. A trait that indicates the health of photosystem II in a dark adapted leaf. Quantum yield is calculated as the ratio of variable fluorescence (Fv) to maximum fluorescence (Fm), with a higher value indicating a healthier leaf. Variable fluorescence (Fv) is calculated as the difference in fluorescence between a leaf where all photsystems have been saturated by light (Fm) and a leaf in a dark-adapted state (minimum fluorescence; Fo). |
comments | |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 0.2 |
maxAllowedValue | 1 |
has broader | photosystem performance trait |
plant structure | leaf |
measured characteristic |
reaction rate enzyme activity rate ratio; proportion dimensionless ratio |
keyword |
quantum yield chlorophyll fluorescence biochemical reaction photosystem II reaction center photosynthesis, light reaction electron transport chain |
scope note | |
has exact match | |
has close match |
continuous fluorescence yield Leaf quantum yield of photosystem II |
has related match | |
examples | exact match: Photosynthesis: quantum efficiency of photosystem II (maximum potential, FvFm) [TRY:3393] (https://www.try-db.org/de/de.php) |
references |
Maxwell & Johnson 2000 Long 1993 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020417 |
Leaf ambient quantum yield
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020418 |
alternative label | leaf_fluorescence_quantum_yield |
description |
Ambient quantum yield [TO:0012004] of photosystem II [GO:0009539], as determined through chlorophyll fluorescence [GO:0090546]. Quantum yield is the ratio [PATO:0001470] of photons [NCIT:C88112] absorbed to photons emitted [SIO:000384] through fluorescence. A trait that indicates the health of photosystem II in a light adapted leaf. Quantum yield is calculated as the ratio of (maximum fluorescence under ambient conditions)-(fluorescence under ambient conditions)/(maximum fluorescence under ambient conditions). |
comments | |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader | photosystem performance trait |
plant structure | leaf |
measured characteristic |
reaction rate enzyme activity rate ratio; proportion dimensionless ratio |
keyword |
quantum yield chlorophyll fluorescence biochemical reaction photosystem II reaction center photosynthesis, light reaction electron transport chain |
scope note | |
has exact match | |
has close match |
continuous fluorescence yield Leaf quantum yield of photosystem II |
has related match | |
examples | exact match: Photosynthesis: quantum efficiency of photosystem II (maximum potential, FvFm) [TRY:3393] (https://www.try-db.org/de/de.php) |
references |
Maxwell & Johnson 2000 Long 1993 |
date created | 29/03/2023 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020418 |
Leaf quantum yield, gas exchange measurement
Leaf heat tolerance maximum critical temperature (Tcrit-cold or Tcrit-min)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020420 |
alternative label | leaf_critical_temperature_minimum |
description |
A temperature response trait [TO:0000432] which is the temperature [PATO:0000146] threshold at which photosystem II [GO:0009539] begins to become inactive [PATO:0002355] as the leaf temperature decreases (is cooled) [PATO:0001306]. This is a modelled parameter [STATO:0000034] derived from the inflection point on a temperature - basal chlorophyll A fluorescence [GO:0090546] curve. The temperature threshold at which photosystem II begins to become inactive as the leaf temperature decreases. This is a modelled parameter derived from the inflection point on a temperature - basal chlorophyll A fluorescence curve. |
comments | |
value type | continuous variable |
unit | C |
minAllowedValue | -50 |
maxAllowedValue | 10 |
has broader |
photosystem performance trait environmental tolerance trait |
plant structure | leaf |
measured characteristic |
temperature minimum |
keyword |
photosystem II reaction center model parameter chlorophyll fluorescence |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Arnold 2021 |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020420 |
Leaf heat tolerance minimum critical temperature (Tcrit-hot or Tcrit-max)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020421 |
alternative label | leaf_critical_temperature_maximum |
description |
A temperature response trait [TO:0000432] which is the temperature [PATO:0000146] threshold at which photosystem II [GO:0009539] begins to become inactive [PATO:0002355] as the leaf temperature increases (is heated) [PATO:0001305]. This is a modelled parameter [STATO:0000034] derived from the inflection point on a temperature - basal chlorophyll A fluorescence [GO:0090546] curve. The temperature threshold at which photosystem II begins to become inactive as the leaf temperature increases. This is a modelled parameter derived from the inflection point on a temperature - basal chlorophyll A fluorescence curve. |
comments | |
value type | continuous variable |
unit | C |
minAllowedValue | 0 |
maxAllowedValue | 100 |
has broader |
photosystem performance trait environmental tolerance trait |
plant structure | leaf |
measured characteristic |
temperature maximum |
keyword |
photosystem II reaction center model parameter chlorophyll fluorescence |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Arnold 2021 |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020421 |
Leaf heat tolerance maximum temperature (Tmax-hot)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020422 |
alternative label | leaf_maximum_temperature |
description |
A temperature response trait [TO:0000432] which is the temperature [PATO:0000146] at maximum [NCIT:C25564] chlorophyll fluorescence (F0) [GO:0090546] as the leaf temperature increases (is heated) [PATO:0001305] which corresponds to potential sustained damage to the photosynthetic apparatus. This is a modelled parameter [STATO:0000034] derived from a temperature - basal chlorophyll A fluorescence [GO:0090546] curve. The temperature at maximum chlorophyll fluorescence (F0) as the leaf temperature increases (is heated), which corresponds to potential sustained damage to the photosynthetic apparatus. This is a modelled parameter derived from a temperature - basal chlorophyll A fluorescence curve. |
comments | |
value type | continuous variable |
unit | C |
minAllowedValue | 0 |
maxAllowedValue | 100 |
has broader |
photosystem performance trait environmental tolerance trait |
plant structure | leaf |
measured characteristic |
temperature maximum |
keyword |
photosystem II reaction center model parameter chlorophyll fluorescence |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020422 |
Leaf ice nucleation temperature
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020423 |
alternative label | leaf_ice_nucleation_temperature |
description |
A temperature response trait [TO:0000432] which is the temperature [PATO:0000146] at which ice [ENVO:01001125] crystals [ENVO:01000845] begin to form inside plant tissues [CARO:0000043]. The temperature at which ice crystals begin to form inside plant tissues. |
comments | |
value type | continuous variable |
unit | C |
minAllowedValue | -40 |
maxAllowedValue | 10 |
has broader | environmental tolerance trait |
plant structure | leaf |
measured characteristic | temperature |
keyword | leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020423 |
Leaf respiration rate per unit leaf area, in the dark (Rdark)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020510 |
alternative label | leaf_dark_respiration_per_area |
description |
The cellular respiration [GO:0045333] rate [PATO:0000161] of plant leaves [PO:0025034] in the dark (absence of any photosynthetically active radiation [ENVO:01001864]), recorded per unit leaf area [PATO:0001323]. The respiration rate of a leaf in the dark (absence of photosynthetically active radiation), calculated as the production of CO2 per unit leaf area. |
comments | Respiration is heavily temperature dependent and the measurement temperature should be specified in the methods or as a context property. |
value type | continuous variable |
unit | nmol{CO2}/m2/s |
minAllowedValue | 1 |
maxAllowedValue | 15000 |
has broader | respiration rate trait |
plant structure | leaf |
measured characteristic |
reaction rate per unit area ratio; proportion rate |
keyword |
cellular respiration carbon dioxide dark biochemical reaction |
scope note | |
has exact match | |
has close match | |
has related match | respiration rate |
examples |
exact match: Leaf dark respiration rate per leaf area [TOP361] (https://top-thesaurus.org/index) exact match: Leaf respiration rate in the dark per leaf area [TRY:54] (https://www.try-db.org/de/de.php) |
references |
Pérez-Harguindeguy 2013 Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020510 |
Leaf respiration rate per unit leaf dry mass, in the dark (Rdark)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020511 |
alternative label | leaf_dark_respiration_per_dry_mass |
description |
The cellular respiration [GO:0045333] rate [PATO:0000161] of plant leaves [PO:0025034] in the dark (absence of any photosynthetically active radiation [ENVO:01001864]), recorded per unit leaf dry mass [TO:0001014]. The respiration rate of a leaf in the dark (absence of photosynthetically active radiation), calculated as the production of CO2 per unit leaf dry mass. |
comments | Respiration is heavily temperature dependent and the measurement temperature should be specified in the methods or as a context property. |
value type | continuous variable |
unit | nmol{CO2}/g/s |
minAllowedValue | 0.1 |
maxAllowedValue | 1000 |
has broader | respiration rate trait |
plant structure | leaf |
measured characteristic |
reaction rate ratio; proportion rate |
keyword |
cellular respiration carbon dioxide dark biochemical reaction |
scope note | |
has exact match | |
has close match | |
has related match | respiration rate |
examples |
exact match: Leaf dark respiration rate per leaf dry mass [TOP362] (https://top-thesaurus.org/index) exact match: Leaf respiration rate in the dark per leaf dry mass [TRY:41] (https://www.try-db.org/de/de.php) |
references |
Pérez-Harguindeguy 2013 Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020511 |
Leaf respiration rate per unit leaf area, in the light (Rday)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020512 |
alternative label | leaf_light_respiration_per_area |
description |
The cellular respiration [GO:0045333] rate [PATO:0000161] of plant leaves [PO:0025034] exposed to ambient [NCIT:C62306] photosynthetically active radiation [ENVO:01001864] levels, recorded per unit leaf area [PATO:0001323]. The respiration rate of a leaf in ambient light (ambient photosynthetically active radiation), calculated as the production of CO2 per unit leaf area. |
comments | Respiration is heavily temperature dependent and the measurement temperature should be specified in the methods or as a context property. |
value type | continuous variable |
unit | nmol{CO2}/m2/s |
minAllowedValue | 10 |
maxAllowedValue | 10000 |
has broader | respiration rate trait |
plant structure | leaf |
measured characteristic |
reaction rate per unit area ratio; proportion rate |
keyword |
cellular respiration carbon dioxide biochemical reaction |
scope note | |
has exact match | |
has close match | |
has related match | respiration rate |
examples | exact match: Leaf respiration rate in light per leaf area [TRY:512] (https://www.try-db.org/de/de.php) |
references |
Pérez-Harguindeguy 2013 Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020512 |
Stem respiration rate per unit stem area, in the dark
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020513 |
alternative label | stem_dark_respiration_per_area |
description |
The cellular respiration [GO:0045333] rate [PATO:0000161] of plant stems [PO:0009047] in the dark (absence of any photosynthetically active radiation [ENVO:01001864]), recorded per unit stem area [PATO:0001323]. The respiration rate of a stem in the dark (absence of photosynthetically active radiation), calculated as the production of CO2 per unit stem area. |
comments | Respiration is heavily temperature dependent and the measurement temperature should be specified in the methods or as a context property. |
value type | continuous variable |
unit |
umol{CO2}/m2/s micromole per square metre second |
minAllowedValue | 0.01 |
maxAllowedValue | 10 |
has broader | respiration rate trait |
plant structure | stem |
measured characteristic |
reaction rate ratio; proportion rate |
keyword |
cellular respiration carbon dioxide dark biochemical reaction |
scope note | |
has exact match | |
has close match | |
has related match | respiration rate |
examples | exact match: Stem respiration rate per stem dry mass [TRY:519] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | stem_respiration_per_dry_mass |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020513 |
Leaf stomatal conductance to water vapour per unit leaf area under ambient conditions (gsw)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020610 |
alternative label | leaf_stomatal_conductance_per_area_ambient |
description |
The stomatal conductance [EnvThes:21211] to water vapour of plant leaves [PO:0025034] exposed to ambient [NCIT:C62306] photosynthetically active radiation [ENVO:01001864] levels and ambient atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033], recorded per unit leaf area [PATO:0001323]. Stomatal conductance is the rate [PATO:0000161] of gaseous [MESH:D005740] water [CHEBI:15377] diffusion [NCIT:C82333] through stomata [PO:0008032]. The rate of gaseous water diffusion through stomata in a leaf exposed to ambient light (photosynthetically active radiation) levels and ambient carbon dioxide concentrations, recorded per unit leaf area. |
comments | Stomatal conductance refers to both the rate of water vapour diffusion exiting the leaf and carbon dioxide diffusion entering the leaf, but is reported here as the rate of water exiting the leaf. |
value type | continuous variable |
unit | mmol{H2O}/m2/s |
minAllowedValue | 0.1 |
maxAllowedValue | 2000 |
has broader | gas exchange trait |
plant structure | leaf |
measured characteristic |
conductivity per unit area ratio; proportion rate |
keyword |
stomatal conductance water stomata; stomatal pore diffusion ambient photosynthetic rate |
scope note | |
has exact match | Stomatal conductance to CO2 |
has close match | stomatal conductance |
has related match | |
examples |
exact match: Stomatal conductance for h2o [TOP368] (https://top-thesaurus.org/index) exact match: Stomata conductance per leaf area [TRY:45] (https://www.try-db.org/de/de.php) exact match: leaf stomatal conductance for H2O per leaf area [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | stomatal_conductance_per_area_ambient |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020610 |
Leaf stomatal conductance to water vapour per unit leaf area during Amax measurement (gsw)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020611 |
alternative label | leaf_stomatal_conductance_per_area_at_Amax |
description |
The stomatal conductance [EnvThes:21211] to water vapour of plant leaves [PO:0025034] whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are exposed to saturating [NCIT:C61427] photosynthetically active radiation [ENVO:01001864] and saturating atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033], recorded per unit leaf area [PATO:0001323]. Stomatal conductance is the rate [PATO:0000161] of gaseous [MESH:D005740] water [CHEBI:15377] diffusion [NCIT:C82333] through stomata [PO:0008032]. The rate of gaseous water diffusion through stomata in a leaf exposed to saturating light (photosynthetically active radiation) levels and saturating carbon dioxide concentrations, recorded per unit leaf area. |
comments | Stomatal conductance refers to both the rate of water vapour diffusion exiting the leaf and carbon dioxide diffusion entering the leaf, but is reported here as the rate of water exiting the leaf. |
value type | continuous variable |
unit | mmol{H2O}/m2/s |
minAllowedValue | 0.1 |
maxAllowedValue | 2000 |
has broader | gas exchange trait |
plant structure | leaf |
measured characteristic |
conductivity per unit area ratio; proportion rate |
keyword |
stomatal conductance water stomata; stomatal pore diffusion maximum photosynthetic rate, Amax |
scope note | |
has exact match | Stomatal conductance to water vapour |
has close match | stomatal conductance |
has related match | |
examples |
exact match: Stomatal conductance for h2o [TOP368] (https://top-thesaurus.org/index) exact match: Stomata conductance per leaf area [TRY:45] (https://www.try-db.org/de/de.php) exact match: leaf stomatal conductance for H2O per leaf area [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | stomatal_conductance_per_area_at_Amax |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020611 |
Leaf stomatal conductance to water vapour per unit leaf area during Asat measurement (gsw)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020612 |
alternative label | leaf_stomatal_conductance_per_area_at_Asat |
description |
The stomatal conductance [EnvThes:21211] to water vapour of plant leaves [PO:0025034] whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are exposed to saturating [NCIT:C61427] photosynthetically active radiation [ENVO:01001864] and ambient atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033], recorded per unit leaf area [PATO:0001323]. Stomatal conductance is the rate [PATO:0000161] of gaseous [MESH:D005740] water [CHEBI:15377] diffusion [NCIT:C82333] through stomata [PO:0008032]. The rate of gaseous water diffusion through stomata in a leaf exposed to saturating light (photosynthetically active radiation) levels and ambient carbon dioxide concentrations, recorded per unit leaf area. |
comments | Stomatal conductance refers to both the rate of water vapour diffusion exiting the leaf and carbon dioxide diffusion entering the leaf, but is reported here as the rate of water exiting the leaf. |
value type | continuous variable |
unit | mmol{H2O}/m2/s |
minAllowedValue | 0.1 |
maxAllowedValue | 2000 |
has broader | gas exchange trait |
plant structure | leaf |
measured characteristic |
conductivity per unit area ratio; proportion rate |
keyword |
stomatal conductance water stomata; stomatal pore diffusion saturated photosynthetic rate, Asat |
scope note | |
has exact match | Stomatal conductance to CO2 |
has close match | stomatal conductance |
has related match | |
examples |
exact match: Stomatal conductance for h2o [TOP368] (https://top-thesaurus.org/index) exact match: Stomata conductance per leaf area [TRY:45] (https://www.try-db.org/de/de.php) exact match: leaf stomatal conductance for H2O per leaf area [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | stomatal_conductance_per_area_at_Asat |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020612 |
Leaf stomatal water vapour resistance under ambient conditions
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020630 |
alternative label | leaf_stomatal_resistance_ambient |
description |
The stomatal [PO:0008032] water vapour resistance [SWEET:propConductivity/Resistance] of plant leaves [PO:0025034] exposed to ambient [NCIT:C62306] photosynthetically active radiation [ENVO:01001864] levels and ambient atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033], recorded per unit leaf area [PATO:0001323]. Stomatal resistance is the resistance to the diffusion [NCIT:C82333] of carbon dioxide [CHEBI:16526] through stomata. Leaf stomatal water vapour resistance under ambient light (photosynthetically active radiation) levels and ambient carbon dioxide concentrations. |
comments | Stomatal resistance is the inverse of leaf stomatal conductance and is regularly used in environmental models and meteorology. An equation converts between stomatal resistance in distance units and stomatal conductance in molar units obtained through gas exchange readings (‘Plants and Microclimate’ by H.G. Jones (1992), page 55 and Appendix 3; ‘Elevated Carbon Dioxide Impacts on Soil and Plant Water Relations’ by M.B. Kirkham (2011), page 149). |
value type | continuous variable |
unit | s/m |
minAllowedValue | 10 |
maxAllowedValue | 1e+06 |
has broader | gas exchange trait |
plant structure | leaf |
measured characteristic |
conductivity rate resistance |
keyword |
stomata; stomatal pore atmospheric carbon dioxide water stomatal conductance diffusion ambient photosynthetic rate |
scope note | |
has exact match | |
has close match | stomatal resistance |
has related match | |
examples |
related match: Stomatal conductance for h2o [TOP368] (https://top-thesaurus.org/index) related match: Leaf water storage transfer resistance [TRY:714] (https://www.try-db.org/de/de.php) |
references |
Jones 1992 Kirkham 2016 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | stomatal_resistance_conductance_ambient |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020630 |
Leaf mesophyll conductance to carbon dioxide per unit leaf area (gm)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020640 |
alternative label | leaf_mesophyll_conductance_per_area |
description |
The diffusion [NCIT:C82333] rate [PATO:0000161] of carbon dioxide [CHEBI:16526] in plant leaves [PO:0025034] from intercellular spaces [PO:0025379] to chloroplasts [GO:0009507], recorded per unit leaf area [PATO:0001323]. The rate of carbon dioxide movement between sub-stomatal cavities (intracellular space) and chloroplasts, per unit leaf area |
comments | |
value type | continuous variable |
unit |
mol{CO2}/m2/s mole per square metre second |
minAllowedValue | 0.01 |
maxAllowedValue | 2000 |
has broader | gas exchange trait |
plant structure | leaf |
measured characteristic |
conductivity per unit area ratio; proportion rate |
keyword |
carbon dioxide intercellular space chloroplast diffusion mesophyll airway conductance |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf mesophyll conductance [TRY:964] (https://www.try-db.org/de/de.php) |
references |
Ely 2021 Flexas 2012 Evans 2009 Warren 2006 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020640 |
Leaf mesophyll conductance to carbon dioxide per unit leaf mass (gm)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020641 |
alternative label | leaf_mesophyll_conductance_per_mass |
description |
The diffusion [NCIT:C82333] rate [PATO:0000161] of carbon dioxide [CHEBI:16526] in plant leaves [PO:0025034] from intercellular spaces [PO:0025379] to chloroplasts [GO:0009507], recorded per unit leaf dry mass [TO:0001014]. The rate of carbon dioxide movement between sub-stomatal cavities (intracellular space) and chloroplasts, per unit leaf mass |
comments | |
value type | continuous variable |
unit |
mmol{CO2}/g/s millimole per gram second |
minAllowedValue | 0.01 |
maxAllowedValue | 10 |
has broader | gas exchange trait |
plant structure | leaf |
measured characteristic |
conductivity ratio; proportion rate |
keyword |
carbon dioxide intercellular space chloroplast diffusion mesophyll airway conductance |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf mesophyll conductance [TRY:964] (https://www.try-db.org/de/de.php) |
references |
Ely 2021 Flexas 2012 Evans 2009 Warren 2006 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020641 |
Leaf transpiration per unit leaf area under ambient conditions (E)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020660 |
alternative label | leaf_transpiration_per_area_ambient |
description |
The transpiration [ENVO:02500035] rate [PATO:0000161] of plant leaves [PO:0025034] exposed to ambient [NCIT:C62306] photosynthetically active radiation [ENVO:01001864] levels and ambient atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033], recorded per unit leaf area [PATO:0001323]. Transpiration rate is the rate at which plants lose water [CHEBI:15377] vapor [NCIT:C63390] through their stomata [PO:0008032]. The rate of water loss from a leaf exposed to ambient light (photosynthetically active radiation) levels and ambient carbon dioxide concentrations, recorded per unit leaf area. |
comments | This trait assumes measurements were made on a leaf under changer conditions. Commercial gas exchange systems create wind inside the chamber to measure transpiration, which means transpiration inside chambers is not the same as transpiration with no chamber involved. |
value type | continuous variable |
unit |
mmol{H2O}/m2/s micromole per square metre second |
minAllowedValue | 0.1 |
maxAllowedValue | 50 |
has broader | transpiration rate trait |
plant structure | leaf |
measured characteristic |
rate ratio; proportion |
keyword |
transpiration water stomata; stomatal pore vapor ambient photosynthetic rate |
scope note | |
has exact match | |
has close match |
Transpiration rate transpiration rate |
has related match | |
examples |
exact match: Leaf transpiration rate per leaf area [TRY:111] (https://www.try-db.org/de/de.php) related match: Photosynthesis A/Ci curve: transpiration rate per leaf area [TRY:3367] (https://www.try-db.org/de/de.php) |
references | Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | leaf_transpiration |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020660 |
Leaf transpiration per unit leaf area during Amax measurement (E)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020661 |
alternative label | leaf_transpiration_per_area_at_Amax |
description |
The transpiration [ENVO:02500035] rate [PATO:0000161] of plant leaves [PO:0025034] whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are exposed to saturating [NCIT:C61427] photosynthetically active radiation [ENVO:01001864] and saturating atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033], recorded per unit leaf area [PATO:0001323]. Transpiration rate is the rate at which plants lose water [CHEBI:15377] vapor [NCIT:C63390] through their stomata [PO:0008032]. The rate of water loss from a leaf exposed to saturating light (photosynthetically active radiation) levels and saturating carbon dioxide concentrations, recorded per unit leaf area. |
comments | This trait assumes measurements were made on a leaf under changer conditions. Commercial gas exchange systems create wind inside the chamber to measure transpiration, which means transpiration inside chambers is not the same as transpiration with no chamber involved. |
value type | continuous variable |
unit |
mmol{H2O}/m2/s micromole per square metre second |
minAllowedValue | 0.1 |
maxAllowedValue | 50 |
has broader | transpiration rate trait |
plant structure | leaf |
measured characteristic |
rate ratio; proportion |
keyword |
transpiration water stomata; stomatal pore vapor maximum photosynthetic rate, Amax |
scope note | |
has exact match | |
has close match |
Transpiration rate transpiration rate |
has related match | |
examples |
exact match: Leaf transpiration rate per leaf area [TRY:111] (https://www.try-db.org/de/de.php) related match: Photosynthesis A/Ci curve: transpiration rate per leaf area [TRY:3367] (https://www.try-db.org/de/de.php) |
references | Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | leaf_transpiration_at_Amax |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020661 |
Leaf transpiration per unit leaf area during Asat measurement (E)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020662 |
alternative label | leaf_transpiration_per_area_at_Asat |
description |
The transpiration [ENVO:02500035] rate [PATO:0000161] of plant leaves [PO:0025034] whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are exposed to saturating [NCIT:C61427] photosynthetically active radiation [ENVO:01001864] and ambient atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033], recorded per unit leaf area [PATO:0001323]. Transpiration rate is the rate at which plants lose water [CHEBI:15377] vapor [NCIT:C63390] through their stomata [PO:0008032]. The rate of water loss from a leaf exposed to saturating light (photosynthetically active radiation) levels and ambient carbon dioxide concentrations, recorded per unit leaf area. |
comments | This trait assumes measurements were made on a leaf under changer conditions. Commercial gas exchange systems create wind inside the chamber to measure transpiration, which means transpiration inside chambers is not the same as transpiration with no chamber involved. |
value type | continuous variable |
unit |
mmol{H2O}/m2/s micromole per square metre second |
minAllowedValue | 0.1 |
maxAllowedValue | 50 |
has broader | transpiration rate trait |
plant structure | leaf |
measured characteristic |
rate ratio; proportion |
keyword |
transpiration water stomata; stomatal pore vapor saturated photosynthetic rate, Asat |
scope note | |
has exact match | |
has close match |
Transpiration rate transpiration rate |
has related match | |
examples |
exact match: Leaf transpiration rate per leaf area [TRY:111] (https://www.try-db.org/de/de.php) related match: Photosynthesis A/Ci curve: transpiration rate per leaf area [TRY:3367] (https://www.try-db.org/de/de.php) |
references | Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | leaf_transpiration_at_Asat |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020662 |
Leaf transpiration rate per unit leaf area, in the dark
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020663 |
alternative label | leaf_dark_transpiration_per_area |
description |
The transpiration [ENVO:02500035] rate [PATO:0000161] of plant leaves [PO:0025034] in the dark (absence of any photosynthetically active radiation [ENVO:01001864]) and exposed to ambient atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033], recorded per unit leaf area [PATO:0001323]. Transpiration rate is the rate at which plants lose water [CHEBI:15377] vapor [NCIT:C63390] through their stomata [PO:0008032]. The rate of water loss from a leaf in the dark (no photosynthetically active radiation) and ambient carbon dioxide concentrations, recorded per unit leaf area. |
comments | |
value type | continuous variable |
unit |
mmol{H2O}/m2/s micromole per square metre second |
minAllowedValue | 1e-04 |
maxAllowedValue | 10 |
has broader | transpiration rate trait |
plant structure | leaf |
measured characteristic |
rate ratio; proportion |
keyword |
transpiration water stomata; stomatal pore vapor dark |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf transpiration rate at nighttime [TRY:1267] (https://www.try-db.org/de/de.php) |
references | Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020663 |
Integrated plant transpiration
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020664 |
alternative label | integrated_plant_transpiration |
description |
Rate [PATO:0000161] of water [CHEBI:15377] loss integrated across an entire plant [PO:0000003], recorded per unit leaf [PO:0025034] area [PATO:0001323] and measured across a duration [PATO:0001309] of at least one day. The rate of water loss integrated across an entire plant, as calculated across longer periods of time under experimental conditions, recorded per unit leaf area. |
comments | |
value type | continuous variable |
unit |
g/cm2{leaf}/d gram per square centimetre day |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader | transpiration rate trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
rate ratio; proportion duration |
keyword |
transpiration water stomata; stomatal pore vapor |
scope note | |
has exact match | plant transpiration |
has close match | |
has related match | |
examples | exact match: Crown (canopy) transpiration [TRY:749] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | whole_plant_transpiration |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020664 |
Whole plant sapflow
Leaf cuticular conductance
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020666 |
alternative label | leaf_cuticular_conductance |
description |
A leaf [PO:0025034] water transport [GO:0006833] trait which is a measure of the rate [PATO:0000161] of water [CHEBI:15377] movement [NCIT:C37994] (conductance) out of a leaf through the cuticle [PO:0000022]. The rate of water movement (conductance) out of a leaf through its cuticle. |
comments | |
value type | continuous variable |
unit | mmol{H2O}/m2/s |
minAllowedValue | -100 |
maxAllowedValue | 100 |
has broader | gas exchange trait |
plant structure | leaf |
measured characteristic |
conductivity per unit area ratio; proportion rate |
keyword |
water transport water plant cuticle leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf cuticular conductance [TRY:709] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020666 |
Leaf conductance to surface water (ksurf)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020667 |
alternative label | leaf_conductance_surface_water |
description |
A leaf [PO:0025034] water transport [GO:0006833] trait which is a measure of the rate [PATO:0000161] of water [CHEBI:15377] movement [NCIT:C37994] (conductance) from a leaf lamina [PO:0020039] to the inside of the leaf. The rate of water movement (conductance) from a leaf lamina to the inside of the leaf. |
comments | |
value type | continuous variable |
unit | umol{H2O}/m2/MPa/s |
minAllowedValue | -100 |
maxAllowedValue | 100 |
has broader | gas exchange trait |
plant structure | leaf |
measured characteristic |
conductivity per unit area ratio; proportion rate |
keyword |
water transport stomatal conductance stomata; stomatal pore water leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020667 |
Leaf foliar water uptake
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020668 |
alternative label | leaf_foliar_water_uptake_rate |
description |
A leaf [PO:0025034] water transport [GO:0006833] trait which is the amount of water [CHEBI:15377] that moves [NCIT:C37994] from a leaf lamina [PO:0020039] to the inside of the leaf. The amount of water that moves from a leaf lamina to the inside of the leaf. |
comments | |
value type | continuous variable |
unit | mol{H2O}/m2 |
minAllowedValue | -10 |
maxAllowedValue | 10 |
has broader | gas exchange trait |
plant structure | leaf |
measured characteristic |
mass per unit area ratio; proportion conductivity |
keyword |
water transport water leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020668 |
Leaf photosynthetic nitrogen use efficiency during Amax measurement (PNUE)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020710 |
alternative label | leaf_photosynthetic_nitrogen_use_efficiency_maximum |
description |
The ratio [PATO:0001470] of a leaf’s [PO:0025034] photosynthetic rate [TO:0001015] to its nitrogen [CHEBI:25555] content, where photosynthesis is measured in plant leaves whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are exposed to saturating [NCIT:C61427] photosynthetically active radiation [ENVO:01001864] and saturating atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033]. The ratio of photosynthesis (CO2 assimilation rate) to leaf nitrogen content, where photosynthesis has been measured in a leaf exposed to saturating light (photosynthetically active radiation) levels and saturating carbon dioxide concentrations; PNUE. |
comments | Leaf nitrogen content and photosynthetic rate can be record either per unit leaf area or per unit leaf mass, but both must have the same denominator. |
value type | continuous variable |
unit |
umol{CO2}/g{N}/s micromole per gram second |
minAllowedValue | 0.1 |
maxAllowedValue | 1000 |
has broader |
gas exchange trait live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
reaction rate mass ratio; proportion rate efficiency |
keyword |
photosynthetic rate nitrogen atom biochemical reaction maximum photosynthetic rate, Amax |
scope note | |
has exact match | |
has close match | nitrogen use efficiency |
has related match | |
examples | exact match: Photosynthesis rate per leaf nitrogen (N) content (photosynthetic nitrogen use efficiency, PNUE) [TRY:135] (https://www.try-db.org/de/de.php) |
references | Field & Mooney 1986 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020710 |
Leaf photosynthetic nitrogen use efficiency during Asat measurement (PNUE)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020711 |
alternative label | leaf_photosynthetic_nitrogen_use_efficiency_saturated |
description |
The ratio [PATO:0001470] of a leaf’s [PO:0025034] photosynthetic rate [TO:0001015] to its nitrogen [CHEBI:25555] content, with the photosynthesis measurements made on leaves which are saturated [NCIT:C61427] by photosynthetically active radiation [ENVO:01001864] and which are exposed to ambient [NCIT:C62306] atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033]. The ratio of photosynthesis (CO2 assimilation rate) to leaf nitrogen content, where photosynthesis has been measured in a leaf exposed to saturating light (photosynthetically active radiation) levels and ambient carbon dioxide concentrations; PNUE. |
comments | Leaf nitrogen content and photosynthetic rate can be record either per unit leaf area or per unit leaf mass, but both must have the same denominator. |
value type | continuous variable |
unit |
umol{CO2}/g{N}/s micromole per gram second |
minAllowedValue | 0.1 |
maxAllowedValue | 1000 |
has broader |
gas exchange trait live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
reaction rate mass ratio; proportion rate efficiency |
keyword |
photosynthetic rate nitrogen atom biochemical reaction saturated photosynthetic rate, Asat |
scope note | |
has exact match | |
has close match | nitrogen use efficiency |
has related match | |
examples | exact match: Photosynthesis rate per leaf nitrogen (N) content (photosynthetic nitrogen use efficiency, PNUE) [TRY:135] (https://www.try-db.org/de/de.php) |
references | Field & Mooney 1986 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020711 |
Leaf photosynthetic phosphorus use efficiency during Amax measurement PPUE)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020712 |
alternative label | leaf_photosynthetic_phosphorus_use_efficiency_maximum |
description |
The ratio [PATO:0001470] of a leaf’s [PO:0025034] photosynthetic rate [TO:0001015] to its phosphorus [CHEBI:28659] content, where photosynthesis is measured in plant leaves whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are exposed to saturating [NCIT:C61427] photosynthetically active radiation [ENVO:01001864] and saturating atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033]. The ratio of photosynthesis (CO2 assimilation rate) to leaf phosphorus content, where photosynthesis has been measured in a leaf exposed to saturating light (photosynthetically active radiation) levels and saturating carbon dioxide concentrations; PPUE. |
comments | Leaf phosphorus content and photosynthetic rate can be record either per unit leaf area or per unit leaf mass, but both must have the same denominator. |
value type | continuous variable |
unit |
umol{CO2}/g{P}/s micromole per gram second |
minAllowedValue | 1 |
maxAllowedValue | 10000 |
has broader |
gas exchange trait live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
reaction rate mass ratio; proportion rate efficiency |
keyword |
photosynthetic rate phosphorus atom biochemical reaction maximum photosynthetic rate, Amax |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020712 |
Leaf photosynthetic phosphorus use efficiency during Asat measurement (PPUE)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020713 |
alternative label | leaf_photosynthetic_phosphorus_use_efficiency_saturated |
description |
The ratio [PATO:0001470] of a leaf’s [PO:0025034] photosynthetic rate [TO:0001015] to its phosphorus [CHEBI:28659] content, with the photosynthesis measurements made on leaves which are saturated [NCIT:C61427] by photosynthetically active radiation [ENVO:01001864] and which are exposed to ambient [NCIT:C62306] atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033]. The ratio of photosynthesis (CO2 assimilation rate) to leaf phosphorus content, where photosynthesis has been measured in a leaf exposed to saturating light (photosynthetically active radiation) levels and ambient carbon dioxide concentrations; PPUE. |
comments | Leaf phosphorus content and photosynthetic rate can be record either per unit leaf area or per unit leaf mass, but both must have the same denominator. |
value type | continuous variable |
unit |
umol{CO2}/g{P}/s micromole per gram second |
minAllowedValue | 1 |
maxAllowedValue | 10000 |
has broader |
gas exchange trait live leaf mineral and ion content trait |
plant structure | leaf |
measured characteristic |
reaction rate mass ratio; proportion rate efficiency |
keyword |
photosynthetic rate phosphorus atom biochemical reaction saturated photosynthetic rate, Asat |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020713 |
Integrated water use efficiency
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020760 |
alternative label | leaf_water_use_efficiency_integrated |
description |
The ratio [PATO:0001470] of biomass [ENVO:01000155] production [EnvThes:21071] (carbon dioxide [ENVO:01000451] fixation) to transpiration [ENVO:02500035] (water [CHEBI:15377] loss) across a given time interval [TimeInterval]. The rate of carbon dioxide fixation relative to water loss, calculated as biomass production / transpiration. This measures how much biomass is produced relative to transpiration across a given time interval, and is therefore an integrated measure of water use efficiency; WUE, transpiration ratio |
comments | |
value type | continuous variable |
unit |
g{biomass}/g{H2O} gram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 50 |
has broader | gas exchange trait |
plant structure | leaf |
measured characteristic |
reaction rate ratio; proportion rate efficiency |
keyword |
water use efficiency water transpiration growth |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Jones 2009 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | water_use_efficiency_integrated |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020760 |
Intrinsic water use efficiency (WUEi)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020761 |
alternative label | leaf_water_use_efficiency_intrinsic |
description |
The ratio [PATO:0001470] of a leaf’s [PO:0025034] photosynthetic rate [TO:0001015] to its stomatal conductance [EnvThes:21211], with photosynthetic rate and stomatal conductance determined by gas exchange measurements. The ratio of photosynthetic rate (A; CO2 assimilation rate) to stomatal conductance (gs; gaseous diffusion), with photosynthetic rate and stomatal conductance determined from gas exchange measurements. |
comments | |
value type | continuous variable |
unit |
umol{CO2}/mmol{H2O} micromole per millimole |
minAllowedValue | 0.001 |
maxAllowedValue | 2 |
has broader | gas exchange trait |
plant structure | leaf |
measured characteristic |
reaction rate ratio; proportion rate efficiency |
keyword |
photosynthetic rate water use efficiency water stomatal conductance |
scope note | |
has exact match | |
has close match | |
has related match |
Water use efficiency Water use efficiency water use efficiency |
examples | exact match: Photosynthesis rate per stomatal conductance [TRY:3128] (https://www.try-db.org/de/de.php) |
references |
Jones 2009 Ely 2021 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | water_use_efficiency_intrinsic |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020761 |
Instantaneous water use efficiency (WUE)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020762 |
alternative label | leaf_water_use_efficiency_instantaneous |
description |
The ratio [PATO:0001470] of a leaf’s [PO:0025034] photosynthetic rate [TO:0001015] to its transpiration [ENVO:02500035] rate [PATO:0000161], with photosynthetic rate and transpiration rate determined by gas exchange measurements. The ratio of photosynthetic rate (A; CO2 assimilation rate) to transpiration rate (E; water loss), with photosynthetic rate and transpiration rate determined from gas exchange measurements, inside a leaf chamber. This is usually called instantaneous water use efficiency, but can also be referred to as photosynthetic water use efficiency (PWUE) or transpiration efficiency. |
comments | |
value type | continuous variable |
unit |
umol{CO2}/mmol{H2O} micromole per millimole |
minAllowedValue | 0.1 |
maxAllowedValue | 200 |
has broader | gas exchange trait |
plant structure | leaf |
measured characteristic |
reaction rate ratio; proportion rate efficiency |
keyword |
photosynthetic rate water use efficiency water transpiration |
scope note | |
has exact match |
Water use efficiency Water use efficiency water use efficiency |
has close match | |
has related match | |
examples | exact match: Photosynthesis rate per leaf transpiration (photosynthetic water use effinciency: WUE) [TRY:134] (https://www.try-db.org/de/de.php) |
references | Jones 2009 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Belinda Medlyn David Ellsworth |
change note | water_use_efficiency_photosynthetic; leaf_water_use_efficiency_photosynthetic |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020762 |
Photochemical reflectance index (PRI)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020813 |
alternative label | leaf_photochemical_reflectance_index |
description |
A remote sensing [EnvThes:21762] index [NCIT:C25390] of the efficiency [PATO:0001029] with which a whole plant [PO:0000003] uses photosynthetically active radiation [ENVO:01001864], calculated from the reflectance [EnvThes:21580] of radiation [ENVO:01001023] off the plant canopy [ENVO:01001242] at 531 nm (a xanthophyll [CHEBI:27325] band) and 570 nm (a reference band): PRI = (R531 - R570) / (R531 + R570). It is recorded with a spectroradiometer [MOSAIC:00000974] and a higher value indicates a higher radiation use efficiency. Photochemical reflectance index measures plant responses to stress and the efficiency with which it uses photosynthetically active radiation, by indicating changes in carotenoid pigments in live foliage. It is calculated from the reflectance of radiation off the plant canopy at 531 nm (a xanthophyll band) and 570 nm (a reference band): PRI = (R531 - R570) / (R531 + R570), with a higher value indicating higher radiation use efficiency. |
comments | |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | -1 |
maxAllowedValue | 1 |
has broader |
photosystem performance trait environmental tolerance trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
ratio; proportion dimensionless ratio index efficiency reflectance |
keyword |
remote sensing canopy vegetation reflectance radiation photosynthetically active radiation xanthophyll Spectroradiometer carotenoid |
scope note | |
has exact match | photochemical reflectance index |
has close match | |
has related match | |
examples | |
references |
Gamon 1997 Peñuelas 1997 Henrich & Brüser 2022 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | leaf_PRI |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020813 |
Water band index
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020814 |
alternative label | leaf_water_band_index |
description |
A remote sensing [EnvThes:21762] index [NCIT:C25390] of whole plant [PO:0000003] water status, which is the ratio [PATO:0001470] of the reflectance [EnvThes:21580] of radiation [ENVO:01001023] off the plant canopy [ENVO:01001242] at 970 nm to the reflectance at 900 nm, recorded with a spectroradiometer [MOSAIC:00000974], where a higher value indicates a higher canopy water [CHEBI:15377] content. Water band index measures whole plant water status. It is the ratio of the reflectance of radiation off the plant canopy at 970 nm to the reflectance at 900 nm; a higher value indicates a higher canopy water content. |
comments | |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 1 |
maxAllowedValue | 1.1 |
has broader |
water transport trait, hydraulic trait environmental tolerance trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
ratio; proportion dimensionless ratio index reflectance |
keyword |
remote sensing canopy vegetation reflectance radiation vegetation Spectroradiometer water |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references |
Peñuelas 1997 Henrich & Brüser 2022 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | water_band_index |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020814 |
Modified normalized difference vegetation index (modified NDVI)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020815 |
alternative label | modified_NDVI |
description |
A remote sensing [EnvThes:21762] index [NCIT:C25390] of whole plant [PO:0000003] vegetation status, which is a ratio [PATO:0001470] that considers the relative reflectance [EnvThes:21580] of red light versus short-wave infrared radiation (SWIR) [ENVO:21001214] off the plant canopy [ENVO:01001242], where a higher value indicates greater vegetation health. The formula is: (SWIR - Red) / (SWIR + Red). A remote sensing index of whole plant vegetation status, which is a ratio that considers the relative reflectance of red light versus short-wave infrared radiation (SWIR) off the plant canopy, where a higher value indicates greater vegetation health. The formula is: (SWIR - Red) / (SWIR + Red). |
comments | Modified NDVI is generally measured from Landsat data. |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 0.1 |
maxAllowedValue | 1 |
has broader | environmental tolerance trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
ratio; proportion dimensionless ratio index reflectance |
keyword |
remote sensing canopy vegetation reflectance radiation vegetation infrared radiation |
scope note | |
has exact match | normalized difference vegetation index |
has close match | |
has related match | |
examples | |
references | Jurgens 1997 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020815 |
Modified chlorophyll absorption ratio index 705
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020816 |
alternative label | leaf_chlorophyll_index_modified_ND705 |
description |
A remote sensing [EnvThes:21762] index [NCIT:C25390] of chlorophyll [CHEBI:28966] absorption [SWEET:procWave/Absorption], which is a ratio [PATO:0001470] that considers the relative reflectance [EnvThes:21580] of different wavelengths off the plant canopy [ENVO:01001242], where a higher value indicates greater chlorophyll absorption. The formula is: (R750-R705)/(R750+R705+2(R445)). A remote sensing index of chlorophyll absorption, which is a ratio that considers the relative reflectance of different wavelengths off the plant canopy, where a higher value indicates greater chlorophyll absorption. The formula is: (R750-R705)/(R750+R705+2(R445)). |
comments | |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 0.1 |
maxAllowedValue | 1 |
has broader | environmental tolerance trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
ratio; proportion dimensionless ratio index reflectance |
keyword |
remote sensing canopy vegetation reflectance radiation vegetation infrared radiation chlorophyll |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references |
Henrich & Brüser 2022 Sims & Gamon 2002 |
date created | 17/05/2023 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020816 |
Leaf chlorophyll content in SPAD units
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0020817 |
alternative label | leaf_chlorophyll_content_SPAD |
description |
A relative measure of the mass [PATO:0000125] of chlorophyll [CHEBI:28966] in a leaf [PO:0025034] determined as the difference in light transmission [SWEET:procWave/Transmission] through a leaf at two specific wavelengths, red (650 nm, absorbed by chlorophyll) and infrared [ENVO:21001214] (940 nm, not absorbed by chlorophyll). A relative measure of a leaf’s chlorophyll content, determined as the difference in light transmission through a leaf at two specific wavelengths, red (650 nm, absorbed by chlorophyll) and infrared (940 nm, not absorbed by chlorophyll). |
comments | |
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | -10 |
maxAllowedValue | 200 |
has broader |
pigment content trait environmental tolerance trait |
plant structure | leaf |
measured characteristic |
ratio; proportion dimensionless ratio index |
keyword |
chlorophyll leaf lamina |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 01/04/2025 |
date modified | 01/04/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0020817 |
Stem hydraulic conductivity (Kh)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021013 |
alternative label | stem_hydraulic_conductivity |
description |
A stem [PO:0009047] water transport [GO:0006833] trait which is a measure of the rate [PATO:0000161] of water [CHEBI:15377] movement [NCIT:C37994] through a stem under a specific [NCIT:C38024] driving force [PATO:0001035] (water potential [EnvThes:22311] gradient [NCIT:C70693]), accounting for the stem length [PATO:0000122]. It is calculated as the ratio [PATO:0001470] of the water flow [NCIT:C41141] rate through the stem segment (kg/s) to the water potential gradient across the stem segment (MPa), multiplied by the path length measured (m). Kh; Measure of the efficiency of water flow through a stem segment. It is calculated as the ratio of the water flow rate (kg/s) to the water potential gradient (MPa) across the stem segment, multiplied by the stem length (m). |
comments | This trait should not be confused with hydraulic conductance (kh), which is the ratio of water flow flow rate to the water potential gradient across the stem segment, but IS NOT normalised to the path length and has units kg/MPa/s. |
value type | continuous variable |
unit | 10^6.kg.m/MPa/s |
minAllowedValue | 0.01 |
maxAllowedValue | 2000 |
has broader | water transport trait, hydraulic trait |
plant structure | stem |
measured characteristic |
conductivity per unit area ratio; proportion rate efficiency |
keyword |
water transport water water potential gradient hydraulic conductivity sapwood water stress trait |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Branch hydraulic conductance [TRY:3392] (https://www.try-db.org/de/de.php) |
references | Choat 2010 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021013 |
Sapwood specific hydraulic conductivity (Ks)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021014 |
alternative label | sapwood_specific_hydraulic_conductivity |
description |
A stem [PO:0009047] water transport [GO:0006833] trait which is a measure of the rate [PATO:0000161] of water [CHEBI:15377] movement [NCIT:C37994] through a stem under a specific [NCIT:C38024] driving force [PATO:0001035] (water potential [EnvThes:22311] gradient [NCIT:C70693]), normalised to the diameter [PATO:0001334] of water transport tissues [CARO:0000043] and accounting for the stem length [PATO:0000122]. It is calculated as the ratio [PATO:0001470] of the water flow [NCIT:C41141] rate through the stem segment (kg/s) to the water potential gradient across the stem segment (MPa), divided by the sapwood [PO:0004513] cross-sectional [NCIT:C63795] area [PATO:0001323] (m2), then multiplied by the path length measured (m). Ks; Measure of the efficiency of water flow through a stem segment normalised to the sapwood cross-sectional area across which the flow is measured. It is calculated as the ratio of the water flow rate (kg/s) to the water potential gradient across the stem segment (MPa), divided by the sapwood cross sectional area (1/m2), then multiplied by the stem length (m). |
comments | |
value type | continuous variable |
unit |
kg/m/MPa/s kilogram per metre megapascal second |
minAllowedValue | 0.01 |
maxAllowedValue | 500 |
has broader | water transport trait, hydraulic trait |
plant structure | stem |
measured characteristic |
conductivity per unit length ratio; proportion rate force efficiency |
keyword |
water transport water water potential gradient hydraulic conductivity sapwood water stress trait |
scope note | |
has exact match | Xylem hydraulic conductivity |
has close match | |
has related match | |
examples | |
references | Choat 2010 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021014 |
Theoretical sapwood specific hydraulic conductivity (Ks)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021015 |
alternative label | sapwood_specific_hydraulic_conductivity_theoretical |
description |
A stem [PO:0009047] water transport [GO:0006833] trait which is a theoretical [MESH:D008962] measure of the rate [PATO:0000161] of water [CHEBI:15377] movement [NCIT:C37994] through a stem under a specific [NCIT:C38024] driving force [PATO:0001035] (water potential [EnvThes:22311] gradient [NCIT:C70693]), calculated from the Hagen Poiseuille equation [hupson:SCAIVPH_00000131], then normalised to the diameter [PATO:0001334] of water transport tissues [CARO:0000043] and accounting for the stem length [PATO:0000122]. It is the calculated sapwood hydraulic conductance, divided by the sapwood [PO:0004513] cross-sectional [NCIT:C63795] area [PATO:0001323] (m2), multiplied by the path length measured (m2). Theoretical Ks; A calculation of the theoretical flow rate of water (kg/s) along a stem for a given drop in pressure (MPa), normalised to the microscopically determined cross-sectional area without bark and pith (the diameter of water transport tissues). The calculation is based on Hagen-Poiseuille’s law. |
comments | |
value type | continuous variable |
unit |
kg/m/MPa/s kilogram per metre megapascal second |
minAllowedValue | 0.05 |
maxAllowedValue | 5000 |
has broader | water transport trait, hydraulic trait |
plant structure | stem |
measured characteristic |
conductivity per unit area ratio; proportion rate force efficiency |
keyword |
water transport water water potential gradient hydraulic conductivity sapwood water stress trait Models, Theoretical Hagen Poiseuille equation |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Wood (sapwood) specific conductivity (stem specific conductivity) [TRY:1096] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021015 |
Stem specific hydraulic conductivity (Ks)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021016 |
alternative label | stem_specific_hydraulic_conductivity |
description |
A stem [PO:0009047] water transport [GO:0006833] trait which is a measure of the rate [PATO:0000161] of water [CHEBI:15377] movement [NCIT:C37994] through a stem under a specific [NCIT:C38024] driving force [PATO:0001035] (water potential [EnvThes:22311] gradient [NCIT:C70693]), normalised to the diameter [PATO:0001334] of water transport tissues [CARO:0000043] and accounting for the stem length [PATO:0000122]. It is calculated as the ratio [PATO:0001470] of the water flow [NCIT:C41141] rate through the stem segment (kg/s) to the water potential gradient across the stem segment (MPa), divided by the stem cross-sectional [NCIT:C63795] area [PATO:0001323] (m2), then multiplied by the path length measured (m). Ks; Measure of the efficiency of water flow through a stem segment normalised to the stem (sapwood + bark) cross-sectional area across which the flow is measured. It is calculated as the ratio of the water flow rate (kg/s) to the water potential gradient across the stem segment (MPa), divided by the stem cross sectional area (1/m2), then multiplied by the stem length (m). |
comments | |
value type | continuous variable |
unit |
kg/m/MPa/s kilogram per metre megapascal second |
minAllowedValue | 0.01 |
maxAllowedValue | 500 |
has broader | water transport trait, hydraulic trait |
plant structure | stem |
measured characteristic |
conductivity per unit length ratio; proportion rate force efficiency |
keyword |
water transport water water potential gradient hydraulic conductivity sapwood water stress trait |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Choat 2010 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | transverse_branch_area_specific_conductivity |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021016 |
Leaf specific hydraulic conductance (kleaf)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021017 |
alternative label | leaf_specific_hydraulic_conductance |
description |
A leaf [PO:0025034] water transport [GO:0006833] trait which is a measure of the rate [PATO:0000161] of water [CHEBI:15377] movement [NCIT:C37994] through a leaf under a specific [NCIT:C38024] driving force [PATO:0001035] (water potential [EnvThes:22311] gradient [NCIT:C70693]), normalised to the leaf area [PATO:0001323]. It is calculated as the ratio [PATO:0001470] of the water flow rate through the leaf (mmol/s) to the water potential gradient gradient from the petiole [PO:0020038] to mesophyll [PO:0006070] substomatal cavities (MPa), divided by the leaf area (m2). kleaf; Measure of how efficiently water is transported through a leaf. It is calculated as the ratio of water flow rate through the leaf (mmol/s) to the water potential gradient from the petiole to mesophyll substomatal cavities (MPa), divided by the leaf area (1/m2). As this is a measure of ‘conductance’ not ‘conductivity’ the measurement is not normalised to the path length (the leaf length). |
comments | This trait is also sometimes referred to as ‘Leaf specific conductivity’ in the literature despite the fact it is not normalised to path length and therefore is a ‘conductance’ not a ‘conductivity’. |
value type | continuous variable |
unit |
mmol/m2/MPa/s millimole per square metre megapascal second |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | water transport trait, hydraulic trait |
plant structure plant structure |
leaf leaf |
measured characteristic |
conductivity per unit area ratio; proportion rate force efficiency |
keyword |
water transport water water potential gradient hydraulic conductivity leaf water potential water stress trait |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | related match: Leaf hydraulic conductance [TRY:748] (https://www.try-db.org/de/de.php) |
references |
Choat 2010 Blackman 2010 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | leaf_hydraulic_conductivity |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021017 |
Leaf specific hydraulic conductivity (Kl)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021018 |
alternative label | leaf_specific_hydraulic_conductivity |
description |
A stem [PO:0009047] water transport [GO:0006833] trait which is a measure of the rate [PATO:0000161] of water [CHEBI:15377] movement [NCIT:C37994] through a stem under a specific [NCIT:C38024] driving force [PATO:0001035] (water potential [EnvThes:22311] gradient [NCIT:C70693]), normalised to the branches’ leaf [PO:0025034] area [PATO:0001323] and accounting for the path (stem) length [PATO:0000122]. It is calculated as the ratio of the water flow rate (kg/s) to the water potential gradient across the stem segment (MPa), divided by the total leaf area (1/m2), then multiplied by the stem length (m). Kl; Measure of the efficiency of water flow through a stem segment, normalised to the total leaf area distil to the stem segment. It is calculated as the ratio of the water flow rate (kg/s) to the water potential gradient across the stem segment (MPa), divided by the total leaf area (1/m2), then multiplied by the stem length (m). |
comments | This trait is a variant of sapwood specific conductivity normalised to leaf area, usually by multiple Ks (sapwood specific conductivity) by Huber value. It is not a measure of conductivity through a leaf. |
value type | continuous variable |
unit | 10^4.kg/m/MPa/s |
minAllowedValue | 0.1 |
maxAllowedValue | 500 |
has broader | water transport trait, hydraulic trait |
plant structure plant structure |
stem leaf |
measured characteristic |
conductivity per unit area ratio; proportion rate force efficiency |
keyword |
water transport water water potential gradient hydraulic conductivity leaf water potential water stress trait |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf area-specific conductivity (leaf specific conductivity) [TRY:928] (https://www.try-db.org/de/de.php) |
references | Choat 2010 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021018 |
Root hydraulic conductivity (Kh)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021021 |
alternative label | root_hydraulic_conductivity |
description |
A root [PO:0009005] water transport [GO:0006833] trait which is a measure of the rate [PATO:0000161] of water [CHEBI:15377] movement [NCIT:C37994] through a root under a specific [NCIT:C38024] driving force [PATO:0001035] (water potential [EnvThes:22311] gradient [NCIT:C70693]), accounting for the root length [PATO:0000122]. It is calculated as the ratio [PATO:0001470] of the water flow [NCIT:C41141] rate through the root segment (kg/s) to the water potential gradient across the root segment (MPa), multiplied by the path length measured (m). Kh; Measure of the efficiency of water flow through a root segment. It is calculated as the ratio of the water flow rate (kg/s) to the water potential gradient (MPa) across the root segment, multiplied by the root length (m). |
comments | This trait should not be confused with hydraulic conductance (kh), which is the ratio of water flow flow rate to the water potential gradient across the root segment, but IS NOT normalised to the path length and has units kg/MPa/s. |
value type | continuous variable |
unit | 10^6.kg.m/MPa/s |
minAllowedValue | 0.01 |
maxAllowedValue | 2000 |
has broader | water transport trait, hydraulic trait |
plant structure | root |
measured characteristic |
conductivity per unit area ratio; proportion rate efficiency |
keyword |
water transport water water potential gradient hydraulic conductivity sapwood water stress trait |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Branch hydraulic conductance [TRY:3392] (https://www.try-db.org/de/de.php) |
references | Choat 2010 |
date created | 20/05/2023 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021021 |
Root specific hydraulic conductivity
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021022 |
alternative label | root_specific_hydraulic_conductivity |
description |
A root [PO:0009005] water transport [GO:0006833] trait which is a measure of the rate [PATO:0000161] of water [CHEBI:15377] movement [NCIT:C37994] through a root under a specific [NCIT:C38024] driving force [PATO:0001035] (water potential [EnvThes:22311] gradient [NCIT:C70693]), normalised to the diameter [PATO:0001334] of water transport tissues [CARO:0000043] and accounting for the root length [PATO:0000122]. It is calculated as the ratio [PATO:0001470] of the water flow [NCIT:C41141] rate through the root segment (kg/s) to the water potential gradient across the root segment (MPa), divided by the root [PO:0004513] cross-sectional [NCIT:C63795] area [PATO:0001323] (m2), then multiplied by the path length measured (m). Measure of the efficiency of water flow through a root segment normalised to the root cross-sectional area across which the flow is measured. It is calculated as the ratio of the water flow rate (kg/s) to the water potential gradient across the root segment (MPa), divided by the root cross sectional area (1/m2), then multiplied by the root length (m). |
comments | |
value type | continuous variable |
unit |
kg/m/MPa/s kilogram per metre megapascal second |
minAllowedValue | 0.01 |
maxAllowedValue | 500 |
has broader | water transport trait, hydraulic trait |
plant structure | root |
measured characteristic |
conductivity per unit length ratio; proportion rate force efficiency |
keyword |
water transport water water potential gradient hydraulic conductivity sapwood water stress trait |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Choat 2010 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021022 |
Pre-dawn water potential
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021030 |
alternative label | water_potential_predawn |
description |
The shoot system [PO:0009006] water potential [EnvThes:22311] just before sunrise, a proxy for soil water potential [EnvThes:22283] and representing the plant’s daily maximum [NCIT:C25564] (least negative) water potential. The water potential of a plant’s shoot system just before sunrise, a proxy for soil water potential and the plant’s highest (least negative) water potential for the day. |
comments | Predawn water potential is often assumed to equal the soil water potential, but the plant’s water potential does not necessarily equilibrate with soil water potential overnight. It is therefore better considered a ‘proxy’ of soil water potential. |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -20 |
maxAllowedValue | 0 |
has broader | water transport trait, hydraulic trait |
plant structure plant structure |
stem leaf |
measured characteristic |
tension force |
keyword |
shoot system water potential soil water potential leaf water potential water stress trait dawn |
scope note | |
has exact match | |
has close match | |
has related match | leaf water potential |
examples | related match: Leaf water & osmotic potential: leaf water potential [TRY:983] (https://www.try-db.org/de/de.php) |
references | Pérez-Harguindeguy 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021030 |
Midday water potential
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021031 |
alternative label | water_potential_midday |
description |
The average water potential [EnvThes:22311] of a plant’s leaf [PO:0025034] and shoot [PO:0009006] mesophyll [PO:0006070] tissue [CARO:0000043] during maximum midday transpiration [ENVO:02500035] and assumed to be the plant’s daily minimum [NCIT:C25570] water potential. The water potential of a plant’s leaf or shoot photosynthetic tissue during maximum midday transpiration, the time of day when the plant is most water stressed and has the lowest (most negative) water potential. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -20 |
maxAllowedValue | 0 |
has broader | water transport trait, hydraulic trait |
plant structure plant structure |
stem leaf |
measured characteristic |
tension force |
keyword |
shoot system water potential leaf water potential water stress trait drought tolerance |
scope note | |
has exact match | |
has close match | |
has related match | leaf water potential |
examples | related match: Leaf water & osmotic potential: leaf water potential [TRY:983] (https://www.try-db.org/de/de.php) |
references | Pérez-Harguindeguy 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021031 |
Stem sapwood capacitance (C)
Leaf capacitance (Cleaf)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021033 |
alternative label | leaf_capacitance |
description |
The ratio [PATO:0001470] of the change in leaf [PO:0025034] tissue [CARO:0000043] water [CHEBI:15377] volume to the change in leaf tissue water potential [EnvThes:22311]. The ratio of the change in leaf tissue water volume to the change in leaf tissue water potential. |
comments | This trait is derived from pressure-volume curves. |
value type | continuous variable |
unit | 1/MPa |
minAllowedValue | 0 |
maxAllowedValue | 20 |
has broader | water transport trait, hydraulic trait |
plant structure | leaf |
measured characteristic | capacitance |
keyword |
water turgor water stress trait turgor pressure water holding capacity pressure-volume curve |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | related match: Leaf water capacitance [TRY:711] (https://www.try-db.org/de/de.php) |
references | Scholz 2011 |
date created | 22/05/2023 |
date modified | 06/06/2025 |
date reviewed | 14/06/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021033 |
Root sapwood capacitance (C)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021034 |
alternative label | root_sapwood_capacitance |
description |
The ratio [PATO:0001470] of the change in root [PO:0009005] tissue [CARO:0000043] water [CHEBI:15377] volume to the change in root tissue water potential [EnvThes:22311]. The ratio of the change in root tissue water volume to the change in root tissue water potential. |
comments | |
value type | continuous variable |
unit |
kg{H20}/m3/MPa kilogram per cubic metre megapascal |
minAllowedValue | 0 |
maxAllowedValue | 700 |
has broader | water transport trait, hydraulic trait |
plant structure | root |
measured characteristic | capacitance |
keyword |
water turgor water stress trait turgor pressure water holding capacity |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Scholz 2011 |
date created | 22/05/2023 |
date modified | 05/02/2024 |
date reviewed | 14/06/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021034 |
Leaf xylem pressure, 50% lost conductance (P50) (leaf hydraulic vulnerability)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021050 |
alternative label | leaf_water_potential_50percent_lost_conductivity |
description |
The tension [PATO:0002284] (water pressure) (water potential [EnvThes:22311]) in leaf [PO:0025034] xylem vessels [PO:0025417] at which the hydraulic conductance [EnvThes:22133] has declined by 50% from the mean maximum [NCIT:C25564] rate [PATO:0000161]. A measure of leaf hydraulic vulnerability, which is the leaf xylem water pressure at which leaf hydraulic conductance has declined by 50% from the mean maximum rate of hydraulic conductance. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -40 |
maxAllowedValue | 0 |
has broader | water transport trait, hydraulic trait |
plant structure plant structure |
leaf stem |
measured characteristic |
tension force |
keyword |
water potential xylem hydraulic conductivity leaf water potential water stress trait drought tolerance |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Xylem hydraulic vulnerability, xylem cavitation vulnerability, embolism vulnerability, (P20, P50, P8 [TRY:719] (https://www.try-db.org/de/de.php) |
references |
Cochard 2010 Venturas 2017 |
date created | 14/07/2021 |
date modified | 06/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | leaf_hydraulic_vulnerability |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021050 |
Stem xylem pressure, 12% lost conductivity (P12)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021051 |
alternative label | stem_water_potential_12percent_lost_conductivity |
description |
The tension [PATO:0002284] (water pressure) (water potential [EnvThes:22311]) in stem [PO:0009047] xylem vessels [PO:0025417] at which the hydraulic conductivity [EnvThes:22133] has declined by 12% from the mean maximum [NCIT:C25564] rate [PATO:0000161]. A measure of stem hydraulic vulnerability, which is the stem xylem water pressure value at which stem hydraulic conductivity has declined by 12% from the mean maximum rate of hydraulic conductivity. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -20 |
maxAllowedValue | 0 |
has broader | water transport trait, hydraulic trait |
plant structure plant structure |
stem leaf |
measured characteristic |
tension force |
keyword |
water potential xylem hydraulic conductivity water stress trait drought tolerance |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | related match: Xylem hydraulic vulnerability, xylem cavitation vulnerability, embolism vulnerability, (P20, P50, P88) [TRY:719] (https://www.try-db.org/de/de.php) |
references |
Cochard 2010 Venturas 2017 |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | water_potential_12percent_lost_conductivity |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021051 |
Stem xylem pressure, 50% lost conductivity (P50)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021052 |
alternative label | stem_water_potential_50percent_lost_conductivity |
description |
The tension [PATO:0002284] (water pressure) (water potential [EnvThes:22311]) in stem [PO:0009047] xylem vessels [PO:0025417] at which the hydraulic conductivity [EnvThes:22133] has declined by 50% from the mean maximum [NCIT:C25564] rate [PATO:0000161]. A measure of stem hydraulic vulnerability, which is the stem xylem water pressure value at which stem hydraulic conductivity has declined by 50% from the mean maximum rate of hydraulic conductivity. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -20 |
maxAllowedValue | 0 |
has broader | water transport trait, hydraulic trait |
plant structure plant structure |
stem leaf |
measured characteristic |
tension force |
keyword |
water potential xylem hydraulic conductivity water stress trait drought tolerance |
scope note | |
has exact match | Xylem pressure |
has close match | |
has related match | |
examples | related match: Xylem hydraulic vulnerability, xylem cavitation vulnerability, embolism vulnerability, (P20, P50, P88) [TRY:719] (https://www.try-db.org/de/de.php) |
references |
Cochard 2010 Venturas 2017 |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | water_potential_50percent_lost_conductivity |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021052 |
Stem xylem pressure, 88% lost conductivity (P88)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021053 |
alternative label | stem_water_potential_88percent_lost_conductivity |
description |
The tension [PATO:0002284] (water pressure) (water potential [EnvThes:22311]) in stem [PO:0009047] xylem vessels [PO:0025417] at which the hydraulic conductivity [EnvThes:22133] has declined by 88% from the mean maximum [NCIT:C25564] rate [PATO:0000161]. A measure of stem hydraulic vulnerability, which is the stem xylem water pressure value at which stem hydraulic conductivity has declined by 88% from the mean maximum rate of hydraulic conductivity. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -20 |
maxAllowedValue | 0 |
has broader | water transport trait, hydraulic trait |
plant structure plant structure |
stem leaf |
measured characteristic |
tension force |
keyword |
water potential xylem hydraulic conductivity water stress trait drought tolerance |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | related match: Xylem hydraulic vulnerability, xylem cavitation vulnerability, embolism vulnerability, (P20, P50, P88) [TRY:719] (https://www.try-db.org/de/de.php) |
references |
Cochard 2010 Venturas 2017 |
date created | 14/07/2021 |
date modified | 03/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | water_potential_88percent_lost_conductivity |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021053 |
Hydraulic safety margin, 50%
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021054 |
alternative label | hydraulic_safety_margin_50 |
description |
The difference between the shoot water potential [EnvThes:22311] (tension [PATO:0002284] (water pressure) in stem [PO:0009047] xylem vessels [PO:0025417]) at which the mean turgor pressure [TO:0000701] of cells [CL:0000000] drops to zero and the water potential at which the hydraulic conductivity [EnvThes:22133] has declined by 50% from the mean maximum [NCIT:C25564] rate [PATO:0000161]. The difference between the stem water potential at turgor loss and the water potential at which 50% of conductivity is lost. |
comments | Alternative definitions for this trait include 1) the difference between the minimum (most negative) observed stem water potential and the water potential at which 50% of conductivity is lost; and 2) the difference between the stem water potential at stomatal closure and the water potential at which 50% of conductivity is lost. If data mapped to this trait use one of these alternate definitions it should be clearly stated in the methods or added as a method context property. |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -5 |
maxAllowedValue | 10 |
has broader | water transport trait, hydraulic trait |
plant structure | stem |
measured characteristic |
tension force |
keyword |
water potential xylem hydraulic conductivity water stress trait drought tolerance |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
related match: Xylem hydraulic vulnerability, xylem cavitation vulnerability, embolism vulnerability, (P20, P50, P8 [TRY:719] (https://www.try-db.org/de/de.php) exact match: Resistance to xylem cavitation [BROT:19] (http://doi.org/10.1038/sdata.2018.135) |
references |
Cochard 2010 Venturas 2017 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021054 |
Hydraulic safety margin, 88%
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021055 |
alternative label | hydraulic_safety_margin_88 |
description |
The difference between the shoot water potential [EnvThes:22311] (tension [PATO:0002284] (water pressure) in stem [PO:0009047] xylem vessels [PO:0025417]) at which the mean turgor pressure [TO:0000701] of cells [CL:0000000] drops to zero and the water potential at which the hydraulic conductivity [EnvThes:22133] has declined by 88% from the mean maximum [NCIT:C25564] rate [PATO:0000161]. The difference between the stem water potential at turgor loss and the water potential at which 88% of conductivity is lost. |
comments | Alternative definitions for this trait include 1) the difference between the minimum (most negative) observed stem water potential and the water potential at which 88% of conductivity is lost; and 2) the difference between the stem water potential at stomatal closure and the water potential at which 88% of conductivity is lost. If data mapped to this trait use one of these alternate definitions it should be clearly stated in the methods or added as a method context property. |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -5 |
maxAllowedValue | 10 |
has broader | water transport trait, hydraulic trait |
plant structure | stem |
measured characteristic |
tension force |
keyword |
water potential xylem hydraulic conductivity water stress trait drought tolerance |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
related match: Xylem hydraulic vulnerability, xylem cavitation vulnerability, embolism vulnerability, (P20, P50, P8 [TRY:719] (https://www.try-db.org/de/de.php) exact match: Resistance to xylem cavitation [BROT:19] (http://doi.org/10.1038/sdata.2018.135) |
references |
Cochard 2010 Venturas 2017 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021055 |
Leaf turgor loss point
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021056 |
alternative label | leaf_turgor_loss_point |
description |
A parameter [STATO:0000034] calculated from a pressure-volume curve [APD:glossary/40124], which is the leaf water potential [EnvThes:22311] at which the mean turgor pressure [TO:0000701] of cells [CL:0000000] in the leaf/terminal shoot drops to zero. This is the point at which the plant wilts. A parameter calculated from a pressure-volume curve which is the water potential at which the mean cell turgor pressure in the leaf/shoot declines to zero. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -5 |
maxAllowedValue | 0 |
has broader | water transport trait, hydraulic trait |
plant structure | leaf |
measured characteristic |
tension force model parameter |
keyword |
water potential turgor pressure leaf water potential water stress trait pressure-volume curve drought tolerance |
scope note | |
has exact match |
osmotic adjustment break point wilting point |
has close match | |
has related match | |
examples | exact match: Leaf water & osmotic potential: leaf osmotic potential at turgor loss [TRY:189] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021056 |
Osmotic potential
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021057 |
alternative label | osmotic_potential |
description |
In a plant tissue [CARO:0000043], the potential energy [ENVO:2000016] of water [CHEBI:15377] molecules to flow [NCIT:C41141] across a semi-permeable [PATO:0000982] membrane [GO:0016020] due to the differences in solute [SIO:010418] concentration [PATO:0000033] across the membrane, such that the osmotic potential becomes more negative as the solute concentration increases or the cell water content decreases. Osmotic potential is equal to negative osmotic pressure [EnvThes:21558] and is also referred to as solute potential. The potential energy of water molecules to move across a semi-permeable membrane due to differences in solute concentration across the membrane; solute potential |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -10 |
maxAllowedValue | 0 |
has broader | water transport trait, hydraulic trait |
plant structure plant structure |
stem leaf |
measured characteristic |
pressure force |
keyword |
potential energy water solute osmotic pressure turgor pressure water stress trait leaf water potential |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf water & osmotic potential: leaf water potential [TRY:983] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021057 |
Osmotic potential at full tugor
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021058 |
alternative label | osmotic_potential_at_full_turgor |
description |
A parameter [STATO:0000034] calculated from a pressure-volume curve [APD:glossary/40124], which is, for a shoot or leaf [PO:0025034], the osmotic potential (solute potential) when they are fully hydrated (relative water content = 100%). Osmotic potential is always negative and is the potential energy [ENVO:2000016] of water [CHEBI:15377] molecules to flow [NCIT:C41141] across a semi-permeable [PATO:0000982] membrane [GO:0016020] due to the differences in solute [SIO:010418] concentration [PATO:0000033] across the membrane. A parameter calculated from a pressure-volume curve which is the osmotic potential (solute potential) in leaf cells at full turgor (when relative water content = 100%). Osmotic potential is the energy of water molecules to move across a semi-permeable membrane due to differences in solute concentration across a membrane and is least negative (largest) when plants are at full turgor. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -10 |
maxAllowedValue | -0.1 |
has broader | water transport trait, hydraulic trait |
plant structure plant structure |
stem leaf |
measured characteristic |
pressure force model parameter |
keyword |
potential energy water solute osmotic pressure turgor pressure water stress trait pressure-volume curve leaf water potential drought tolerance |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Leaf water & osmotic potential: leaf osmotic potential at full turgor [TRY:188] (https://www.try-db.org/de/de.php) |
references | Sack 2022 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021058 |
Bulk modulus of elasticity (e)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021059 |
alternative label | bulk_modulus_of_elasticity |
description |
A parameter [STATO:0000034] calculated from a pressure-volume curve [APD:glossary/40124], which is, for a shoot or leaf [PO:0025034], the ratio [PATO:0001470] of the change in cell [CL:0000000] turgor potential (negative turgor pressure [TO:0000701]) over the relative change in cell volume (change in volume/initial volume). It is an estimation of cell wall [GO:0009505] rigidity. A parameter calculated from a pressure-volume curve which indicates the elasticity or rigidity of cells in leaves. It is the ratio of the change in cell turgor potential to the change in relative cell volume (change in volume/initial volume). |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | water transport trait, hydraulic trait |
plant structure plant structure |
stem leaf |
measured characteristic |
pressure force volume ratio; proportion model parameter |
keyword |
cell turgor pressure plant-type cell wall water stress trait pressure-volume curve modulus of elasticity drought tolerance |
scope note | |
has exact match | |
has close match | |
has related match | osmotic adjustment capacity |
examples | exact match: Leaf elastic modulus [TRY:190] (https://www.try-db.org/de/de.php) |
references | Sack 2022 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021059 |
Leaf relative water content predawn
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021060 |
alternative label | leaf_relative_water_content_predawn |
description |
The ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] in a fresh [EnvThes:21976] leaf [PO:0025034] harvested pre-dawn [SWEET:reprTimeDay/Dawn] to the mass of water in a leaf at full hydration (saturated [NCIT:C61427]; relative water content = 100%). Ratio of the mass of water in a fresh leaf collected pre-dawn to the mass of water in a fully saturated leaf. A fully saturated leaf is one which has been rehydrated to hold the maximum amount of water and is considered to have a relative water content of 100%. |
comments | |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 1.7 |
has broader | water transport trait, hydraulic trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion dimensionless ratio |
keyword |
water dawn water stress trait water holding capacity leaf water content |
scope note | |
has exact match | |
has close match |
Leaf water content leaf relative water content |
has related match | |
examples | related match: Leaf relative water content [TOP47] (https://top-thesaurus.org/index) |
references | no linked references |
date created | 14/07/2021 |
date modified | 06/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021060 |
Leaf relative water content at turgor loss point
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021061 |
alternative label | leaf_relative_water_content_at_turgor_loss_point |
description |
A parameter [STATO:0000034] calculated from a pressure-volume curve [APD:glossary/40124], which is, for a leaf [PO:0025034], the ratio [PATO:0001470] of the mass [PATO:0000125] of water [CHEBI:15377] in the leaf at the turgor [PATO:0001620] loss point to the mass of water in the leaf at full hydration (saturated [NCIT:C61427]; relative water content = 100%). Ratio of the mass of water in leaf at the point the leaf cells lose turgor to the mass of water in a fully saturated leaf. A fully saturated leaf is one which has been rehydrated to hold the maximum amount of water and is considered to have a relative water content of 100%. The plant’s turgor loss point is calculated from a pressure-volume curve. |
comments | |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 1.5 |
has broader | water transport trait, hydraulic trait |
plant structure | leaf |
measured characteristic |
mass mass fraction ratio; proportion dimensionless ratio model parameter |
keyword |
water turgor water stress trait turgor pressure water holding capacity pressure-volume curve drought tolerance leaf water content |
scope note | |
has exact match | |
has close match |
Leaf water content leaf relative water content |
has related match | |
examples | related match: Leaf relative water content [TOP47] (https://top-thesaurus.org/index) |
references | Sack 2022 |
date created | 14/07/2021 |
date modified | 06/06/2025 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021061 |
Root xylem pressure, 50% lost conductivity (P50)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021062 |
alternative label | root_water_potential_50percent_lost_conductivity |
description |
The tension [PATO:0002284] (water pressure) (water potential [EnvThes:22311]) in root [PO:0009005] xylem vessels [PO:0025417] at which the hydraulic conductivity [EnvThes:22133] has declined by 50% from the mean maximum [NCIT:C25564] rate [PATO:0000161]. A measure of root hydraulic vulnerability, which is the root xylem water pressure value at which root hydraulic conductivity has declined by 50% from the mean maximum rate of hydraulic conductivity. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -20 |
maxAllowedValue | 0 |
has broader | water transport trait, hydraulic trait |
plant structure | root |
measured characteristic |
tension force |
keyword |
water potential xylem hydraulic conductivity water stress trait drought tolerance |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | related match: Xylem hydraulic vulnerability, xylem cavitation vulnerability, embolism vulnerability, (P20, P50, P8 [TRY:719] (https://www.try-db.org/de/de.php) |
references |
Cochard 2010 Venturas 2017 |
date created | 14/06/2023 |
date modified | 05/02/2024 |
date reviewed | 14/06/2023 |
reviewed by | Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021062 |
Root xylem pressure, 12% lost conductivity (P12)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021063 |
alternative label | root_water_potential_12percent_lost_conductivity |
description |
The tension [PATO:0002284] (water pressure) (water potential [EnvThes:22311]) in root [PO:0009005] xylem vessels [PO:0025417] at which the hydraulic conductivity [EnvThes:22133] has declined by 12% from the mean maximum [NCIT:C25564] rate [PATO:0000161]. A measure of root hydraulic vulnerability, which is the root xylem water pressure value at which root hydraulic conductivity has declined by 12% from the mean maximum rate of hydraulic conductivity. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -20 |
maxAllowedValue | 0 |
has broader | water transport trait, hydraulic trait |
plant structure | root |
measured characteristic |
tension force |
keyword |
water potential xylem hydraulic conductivity water stress trait drought tolerance |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | related match: Xylem hydraulic vulnerability, xylem cavitation vulnerability, embolism vulnerability, (P20, P50, P8 [TRY:719] (https://www.try-db.org/de/de.php) |
references |
Cochard 2010 Venturas 2017 |
date created | 14/06/2023 |
date modified | 05/02/2024 |
date reviewed | 14/06/2023 |
reviewed by | Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021063 |
Root xylem pressure, 88% lost conductivity (P88)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021064 |
alternative label | root_water_potential_88percent_lost_conductivity |
description |
The tension [PATO:0002284] (water pressure) (water potential [EnvThes:22311]) in root [PO:0009005] xylem vessels [PO:0025417] at which the hydraulic conductivity [EnvThes:22133] has declined by 88% from the mean maximum [NCIT:C25564] rate [PATO:0000161]. A measure of root hydraulic vulnerability, which is the root xylem water pressure value at which root hydraulic conductivity has declined by 88% from the mean maximum rate of hydraulic conductivity. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -20 |
maxAllowedValue | 0 |
has broader | water transport trait, hydraulic trait |
plant structure | root |
measured characteristic |
tension force |
keyword |
water potential xylem hydraulic conductivity water stress trait drought tolerance |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | related match: Xylem hydraulic vulnerability, xylem cavitation vulnerability, embolism vulnerability, (P20, P50, P8 [TRY:719] (https://www.try-db.org/de/de.php) |
references |
Cochard 2010 Venturas 2017 |
date created | 14/06/2023 |
date modified | 05/02/2024 |
date reviewed | 14/06/2023 |
reviewed by | Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021064 |
Leaf xylem pressure, 12% lost conductance (P12)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021065 |
alternative label | leaf_water_potential_12percent_lost_conductivity |
description |
The tension [PATO:0002284] (water pressure) (water potential [EnvThes:22311]) in leaf [PO:0025034] xylem vessels [PO:0025417] at which the hydraulic conductance [EnvThes:22133] has declined by 12% from the mean maximum [NCIT:C25564] rate [PATO:0000161]. A measure of leaf hydraulic vulnerability, which is the leaf xylem water pressure at which leaf hydraulic conductance has declined by 12% from the mean maximum rate of hydraulic conductance. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -40 |
maxAllowedValue | 0 |
has broader | water transport trait, hydraulic trait |
plant structure plant structure |
leaf stem |
measured characteristic |
tension force |
keyword |
water potential xylem hydraulic conductivity leaf water potential water stress trait drought tolerance |
scope note | |
has exact match | |
has close match | |
has related match | leaf water potential |
examples | exact match: Xylem hydraulic vulnerability, xylem cavitation vulnerability, embolism vulnerability, (P20, P50, P8 [TRY:719] (https://www.try-db.org/de/de.php) |
references |
Cochard 2010 Venturas 2017 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021065 |
Leaf xylem pressure, 88% lost conductance (P88)
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0021066 |
alternative label | leaf_water_potential_88percent_lost_conductivity |
description |
The tension [PATO:0002284] (water pressure) (water potential [EnvThes:22311]) in leaf [PO:0025034] xylem vessels [PO:0025417] at which the hydraulic conductance [EnvThes:22133] has declined by 88% from the mean maximum [NCIT:C25564] rate [PATO:0000161]. A measure of leaf hydraulic vulnerability, which is the leaf xylem water pressure at which leaf hydraulic conductance has declined by 88% from the mean maximum rate of hydraulic conductance. |
comments | |
value type | continuous variable |
unit |
MPa megapascal |
minAllowedValue | -40 |
maxAllowedValue | 0 |
has broader | water transport trait, hydraulic trait |
plant structure plant structure |
leaf stem |
measured characteristic |
tension force |
keyword |
water potential xylem hydraulic conductivity leaf water potential water stress trait drought tolerance |
scope note | |
has exact match | |
has close match | |
has related match | leaf water potential |
examples | exact match: Xylem hydraulic vulnerability, xylem cavitation vulnerability, embolism vulnerability, (P20, P50, P8 [TRY:719] (https://www.try-db.org/de/de.php) |
references |
Cochard 2010 Venturas 2017 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Timothy Brodribb Brendan Choat |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0021066 |
Plant growth form
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030010 |
alternative label | plant_growth_form |
description |
A whole plant [PO:0000003] phenotype [NCIT:C16977] trait that summarises different components of a whole plant’s shape [PATO:0000052] and structure [PATO:0000141] into general groups [NCIT:C43359]. Characters that contribute to the plant form categories include the height [PATO:0000119] of the vegetative shoot system [PO:0025607], the distribution of leaves [PO:0025034] along the plant stem [PO:0009047], and the position [PATO:0000140] and count [NCIT:C25463] of stems and/or leaves relative to the ground surface. The form of a plant, capturing a general sense of plant height and shape, which parts of a plant are woody versus herbaceous, the number of stems arising at ground level, and the distribution of leaves relative to the main stem. |
comments |
This definition of plant growth form is narrower than what is used by many other references. Here, information pertaining to where a plant grows is captured by plant_growth_substrate . Terminology about the shape and length of stems and distribution of leaves is included in stem_growth_habit . An indication of whether a plant is parasitic is presented in parasitic . Included in the list of plant growth forms are two terms that are exclusively used to describe Australian plants, mallee and hummock, and one, tussock, that is an important growth form of Australian grasses, but globally used less frequently.
|
value type | categorical variable |
has narrower |
plant_growth_form_herb A seed-bearing plant which does not have a woody above-ground stem; when available this term has been divided into more detailed terms. (Synonyms, forb) plant_growth_form_subshrub A plant that is only woody at the base, with the remainder of the stems regenerating yearly. This term is not meant to encompass short-lived plants that are only borderline woody. (Synonyms, suffrutescent) plant_growth_form_shrub A woody plant that is distinguished by NOT being a tree, due to one of more of the following characteristics, 1) they are less than 8 metres in height; 2) if a plant community includes trees, the shrubs are shorter than the surrounding trees and not part of the canopy; 3) in comparison to trees, the leaves are more distributed along the entire trunk; 4) the plant has multiple relatively narrow stems arising at or near ground level. The definition of shrub is complex, as there are many single-stemmed shrubs within Australia and many taxa that are described in the taxonomic literature as a shrub or small tree.plant_growth_form_mallee Refers to Eucalyptus species which are small trees that form a large lignotuber. They have multiple stems arising at or near ground level and regenerate from the lignotuber following fire. plant_growth_form_tree A tall, woody, perennial plant, usually with a single main trunk, and its leaves predominantly elevated above the ground surface. plant_growth_form_graminoid Herbaceous plant with a grass-like morphology that is within the order Poales. Taxa both with and without a tussock form are mapped to this term. This term is most frequently applied to three large monocot families, Poaceae, Cyperaceae, and Juncaceae, but the term could apply to other taxa within Poales with a grass-like morphology, including narrow, linear leaves and non-showy flowers, including Restionaceae, Centrolepidaceae, Anarthriaceae, and Ecdeiocoleaceae. Taxa outside Poales with a grass-like morphology should be designated as herbs and also have the term tufted mapped to the trait stem_growth_habit .plant_growth_form_tussock A subcategory of graminoid, which is a plant where many shoots from the basal meristem form prominent tufts. plant_growth_form_graminoid_not_tussock A subcategory of graminoid, indicating a plant which explicitly lacks a tussock morphology, with the leaves not growing in tufts. plant_growth_form_hummock Plant that grows as a dense mound up to 1 metre in height. The term generally applies only to species within the genera Triodia that form such mounds and these are considered a distinctive and uniquely Australian growth form. plant_growth_form_basal_large A plant whose leaves form a distinctly large basal tuft or rosette, including large acaulescent monocots and cycads. plant_growth_form_geophyte Subcategory of herb, specifically referring to plants that survive the winter/dry season as an organ (rhizome, bulb, corm, or tuber) buried in dry soil, with all leaves dying back each year. plant_growth_form_palmoid Plant that bears a rosette-like canopy of typically large, often compound leaves atop a usually thick (pachycaulous), columnar, unbranched or little-branched stem. Palms, tree ferns, trunked cycads, trunked grass-trees, and Pandanus are mapped to this term. (Synonyms, rosette-tree, palm, grass-tree) plant_growth_form_climber Plant that climbs up another plant’s stem or branches, rather than being able to support itself. Term used only if datasets do not specify if a climbing plant is herbaceous (a vine) or woody (a liana). plant_growth_form_climber_herbaceous Herbaceous plant that climbs up another plant’s stem or branches, rather than being able to support itself. This is usually synonymous with vine . Types of climbers (scrambling, twining) are captured under the trait plant_climbing_mechanism . (Synonyms, vine)plant_growth_form_climber_woody Woody or thick-stemmed (>2 cm) plant that climbs up another plant’s stem or branches, rather than being able to support itself. This is usually synonymous with liana . Woody climbers generally use hooks, tendrils, and/or adventitious roots to climb; the climbing mechanisms used by a taxon are captured under the trait plant_climbing_mechanism . (Synonyms, liana)plant_growth_form_fern A taxonomic grouping that includes acaulescent ferns; ferns are vascular plants that reproduce via spores and have neither seeds nor flowers. plant_growth_form_lycophyte A taxonomic grouping that includes quillworts, clubmosses, and spike mosses. |
has broader |
whole plant phenotype trait whole plant morphology trait stem morphology trait |
plant structure plant structure plant structure |
whole plant stem leaf |
measured characteristic |
organismal quality spatial pattern, distribution shape structure height |
keyword |
vegetative shoot system wood, secondary xylem growth canopy |
scope note | none |
has exact match | |
has close match | whole plant growth form |
has related match | |
examples |
close match: Plant growth form [TOP136] (https://top-thesaurus.org/index) close match: Plant growth form [TRY:42] (https://www.try-db.org/de/de.php) close match: Growth_form_2 [GIFT:1.2.2] (https://gift.uni-goettingen.de) exact match: whole plant growth form [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) close match: whole plant growth form diversity [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Growth form [BROT:1] (http://doi.org/10.1038/sdata.2018.135) (http://doi.org/10.1038/sdata.2018.135) exact match: Growth form and habit [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) |
references |
Pérez-Harguindeguy 2013 Simpson 2019 Cornellison 2003 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030010 |
Life form
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030011 |
alternative label | life_form |
description |
Raunkiaer classification of life form, which is a feature of the whole plant [PO:0000003] defining the position [PATO:0000140] of the perennating meristematic tissue [PO:0006079] (buds [PO:0000055] or shoot apices [PO:0000037]) on the shoot system [PO:0009006], their distance [PATO:0000040] to the ground surface [sweetontology.net/realmSoil/Ground] and the protection afforded to survive the unfavourable season, or the production of seeds [PO:0009010] to avoid the unfavourable season. Raunkiaer classification of life form, indicating the location of and protection provided to surviving meristematic tissue (buds) during the unfavourable (cold or dry) season. |
comments | |
value type | categorical variable |
has narrower |
life_form_phanerophyte Plant whose perennating buds are on persistent shoots which rise at least 50 cm above the soil surface. These are normally woody perennials. life_form_chamaephyte Plant whose perennating buds are on persistent shoots that do not extend more than 50 cm above the soil surface. These are normally woody perennials. life_form_hemicryptophyte Plant whose perennating buds are at or near the soil surface. life_form_cryptophyte Plant whose perennating buds are subterranean or under water. This grouping can be further divided into geophyte, helophyte, and hydrophyte. life_form_geophyte Plant that perennates as an organ (rhizome, bulb, corm, or tuber) buried in dry soil, with all leaves dying back each year; a subcategory of cryptophyte. life_form_helophyte Plant that perennates as an organ (rhizome, bulb, corm, or tuber) buried in marshy or wet soil or lying under water, with buds emerging during the growing season and shoots and leaves rising about the water surface; a subcategory of cryptophyte. (Synonyms, emergent_hydrophyte) life_form_hydrophyte Plant that perennates as buds or as an organ (rhizome, bulb, corm, or tuber) buried in marshy or wet soil or lying under water, with shoots emerging during the growing season that remain below or at the water surface; a subcategory of cryptophyte. life_form_therophyte Annual plants whose shoot and root systems die completely at the end of flowering and seed production, such that they survive the unfavourable cold or dry season in the form of seeds. life_form_epiphyte Plant that grows on the surface of another plant. life_form_aerophyte Plant that obtains moisture and nutrients from the air and rain, resting on other plants or the ground surface. |
has broader |
whole plant phenotype trait whole plant morphology trait reproductive shoot system morphology trait |
plant structure plant structure plant structure |
whole plant seed bud |
measured characteristic |
organismal quality spatial pattern, distribution position |
keyword |
whole plant lifeform shoot system meristem life form |
scope note | none |
has exact match | whole plant lifeform |
has close match | |
has related match | life form |
examples |
exact match: Plant life form [TOP210] (https://top-thesaurus.org/index) exact match: Plant life form (Raunkiaer life form) [TRY:343] (https://www.try-db.org/de/de.php) exact match: plant growth form [LEDA:1.1] (https://uol.de/en/landeco/research/leda/standards) exact match: Life form [GIFT:2.3] (https://gift.uni-goettingen.de) |
references |
Raunkiaer 1934 LEDA Data Standards 2005 Pérez-Harguindeguy 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030011 |
Life history
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030012 |
alternative label | life_history |
description |
Categorical description of the duration [PATO:0001309] of a plant’s lifespan (longevity [NCIT:C153298]), from seed germination [GO:0009845] to death [GO:0016265]. Categorical description of the duration of a plant’s lifespan, from germination to death. |
comments |
Studies will differ in the subset of terms they use to describe a plant’s life history, such that some researchers will distinguish between ephemeral and annual species, and other researchers will group these life history categories together under annual . In addition, only a subset of studies will use the term short-lived perennial ; the majority will score all perennial plants as perennial . Rangeland studies and post-fire studies are those most likely to score species as ephemeral or short-lived perennial , as these are environments where perennial species’ lifespans are often divided into those that are short-lived due to environmental conditions and those that are able to persist through the environmentally unfavourable period.
|
value type | categorical variable |
has narrower |
life_history_ephemeral A very short-lived plant, generally with a lifespan of only a few months and the exact length of lifespan quite variable and determined by environmental conditions. life_history_annual A plant that lives for up to one year after germinating, completing its life cycle in a single growing season. life_history_biennial A plant that lives for up to two years after germinating, requiring two growing seasons to complete its life cycle and dying following the second growing season. life_history_perennial A plant that lives for three or more growing seasons, with an exact lifespan that is indeterminate. life_history_short_lived_perennial A perennial whose lifespan is less than approximately five years, with the exact lifespan generally dependent on environmental conditions. |
has broader | whole plant phenotype trait |
plant structure | whole plant |
measured characteristic |
organismal quality duration time |
keyword |
death longevity |
scope note | none |
has exact match | life cycle habit |
has close match | |
has related match | |
examples |
exact match: Plant lifespan (longevity) [TRY:59] (https://www.try-db.org/de/de.php) close match: plant lifespan and age of first flowering [LEDA:1.3] (https://uol.de/en/landeco/research/leda/standards) exact match: Lifecycle [GIFT:2.1.1] (https://gift.uni-goettingen.de) related match: Growth form [BROT:1] (http://doi.org/10.1038/sdata.2018.135) (http://doi.org/10.1038/sdata.2018.135) |
references |
Pérez-Harguindeguy 2013 LEDA Data Standards 2005 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030012 |
Ephemeral life history class
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030013 |
alternative label | life_history_ephemeral_class |
description |
A whole plant [PO:0000003] life history [ECOCORE:00000018] which is, for taxa [NCIT_C40098] that display an ephemeral life history, the environmental conditions [ENVO_01000203] associated with seed germination [GO:0009845] and seedling establishment [EnvThes:20410]. For taxa that display an ephemeral life history, the environmental conditions associated with seed germination and seedling establishment. |
comments | |
value type | categorical variable |
has narrower |
life_history_ephemeral_class_disturbance_ephemeral Ephemeral plant the germinates and establishes following disturbance, but the type of disturbance is not specified. life_history_ephemeral_class_rain_ephemeral Ephemeral plant that germinates and establishes following rain or flood events. life_history_ephemeral_class_fire_ephemeral Ephemeral plant that germinates and establishes following fire, where it is unknown if the plant is an obligate or facultative fire ephemeral. life_history_ephemeral_class_fire_ephemeral_facultative Ephemeral plant that increases its germination and establishment following fire, but can also germinate and establish without fire. life_history_ephemeral_class_fire_ephemeral_obligate Ephemeral plant that only germinates and establishes following fire. |
has broader |
fire response trait life history trait |
plant structure | whole plant |
measured characteristic |
organismal quality requirement response to |
keyword |
fire environmental condition seed germination seedling establishment |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 23/02/2023 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030013 |
Lifespan
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030014 |
alternative label | lifespan |
description |
The duration [PATO:0001309] of a plant’s lifespan (longevity [NCIT:C153298]), from seed germination [GO:0009845] to death [GO:0016265]. Plant lifespan, the duration from germination to death. Lifespan refers to the death of both aboveground and belowground biomass, indicating the death of the genetic individual. |
comments | |
value type | continuous variable |
unit |
a year |
minAllowedValue | 0.1 |
maxAllowedValue | 10000 |
has broader | whole plant phenotype trait |
plant structure | whole plant |
measured characteristic |
organismal quality duration time |
keyword |
death longevity |
scope note | |
has exact match | |
has close match | |
has related match | life cycle habit |
examples |
exact match: Plant life span [TOP255] (https://top-thesaurus.org/index) exact match: Plant lifespan (longevity) [TRY:59] (https://www.try-db.org/de/de.php) exact match: Lifespan_1 [GIFT:2.2.1] (https://gift.uni-goettingen.de) exact match: longest whole plant longevity, maximum whole plant longevity [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) close match: Lifespan [BROT:17] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030014 |
Plant growth substrate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030015 |
alternative label | plant_growth_substrate |
description |
A whole plant [PO:0000003] life history [ECOCORE:00000018] trait which indicates either the substrate [EFO:0005061] on which a plant grows [GO:0040007] or, broadly, whether the plant grows in an aquatic [EnvThes:21785] or terrestrial [EnvThes:21880] habitat [ENVO:01000739]. Substrate is defined as the surface to which an organism is attached. Trait broadly indicating where a plant is usually found, referencing the habitat in which a plant grows, the substrate to which a plant is attached, or a plant’s growth medium. |
comments |
Although the majority of vascular plants are terrestrial , for most taxonomic groups plant growth substrate is only recorded if a plant is not terrestrial. The exceptions are ferns and orchids, where both floras and individual researchers tend to specifically indicate which taxa are terrestrial. The values under this trait are recorded as part of plant growth form by many researchers, trait handbooks, and databases; they have been split out here, as the terms capturing what a plant is attached to do not generally describe the form of a plant.
|
value type | categorical variable |
has narrower |
plant_growth_substrate_epiphyte A plant that grows upon another plant. plant_growth_substrate_lithophyte A plant that grows upon a rock. plant_growth_substrate_terrestrial A plant that grows on land, and generally referencing a plant that grows in soil. plant_growth_substrate_semiaquatic A plant that grows partially submerged in water or spends part of its life growing in water. plant_growth_substrate_aquatic A plant that grows in water. plant_growth_substrate_marine A plant that grows in the sea. plant_growth_substrate_hemiepiphyte A plant that spends part of its life cycle as an epiphyte, growing upon another plant. |
has broader | life history trait |
plant structure | whole plant |
measured characteristic | organismal quality |
keyword |
substrate growth aquatic terrestrial habitat epiphyte growth |
scope note | none |
has exact match | |
has close match | |
has related match | substrate |
examples |
related match: Plant growth form [TRY:42] (https://www.try-db.org/de/de.php) close match: Epiphyte_2 [GIFT:1.3.2] (https://gift.uni-goettingen.de) close match: Aquatic_1 [GIFT:1.7.1] (https://gift.uni-goettingen.de) |
references |
Pérez-Harguindeguy 2013 Simpson 2019 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030015 |
Plant photosynthetic organ
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030016 |
alternative label | plant_photosynthetic_organ |
description |
A plant structure morphology trait [TO:0000839] which is the primary [NCIT:C25251] organ [PO:0009008] or tissue [CARO:0000043] a plant [PO:0000003] uses for photosynthesis [GO:0015979], most commonly a leaf [PO:0025034], cladode [PO:0025354], or phyllode [PO:0025335]. Trait indicating a plant’s primary photosynthetic organ or tissue. |
comments |
This trait is not intended to record the presence of primary versus secondary photosynthetic organs; only the primary photosynthetic organ should be keyed in. Many of the allowable values for this trait are frequently included under leaf type or leaf form . Here, we separate terms pertaining to the general form of the leaf (in the trait leaf_type ) from those identifying the plant organ responsible for photosynthesis.
|
value type | categorical variable |
has narrower |
plant_photosynthetic_organ_leaf A true leaf, including both laminar and needle-shaped leaves. plant_photosynthetic_organ_cladode A photosynthetic shoot, regardless of form, that functions as a leaf. For example, cacti pads and Casuarina articles. (Synonyms, article, phylloclade, cladophyll) plant_photosynthetic_organ_phyllode A flattened bladelike petiole. (Synonyms, switch plant) plant_photosynthetic_organ_non-photosynthetic_plant A plant that lacks any photosynthetic organs. |
has broader |
photosynthetic trait leaf morphology trait stem morphology trait |
plant structure plant structure plant structure |
leaf whole plant stem |
measured characteristic |
structure organismal quality |
keyword |
plant organ photosynthesis cladode phyllode growth |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples | related match: Leaf type [TRY:43] (https://www.try-db.org/de/de.php) |
references |
Pérez-Harguindeguy 2013 Burrows 2001 |
date created | 31/10/2022 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | leaf_type |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030016 |
Plant alternative energy and nutrient acquisition strategies
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030017 |
alternative label | plant_alternative_energy_and_nutrient_acquisition_strategy |
description |
A whole plant [PO:0000003] life history [ECOCORE:00000018] trait which are alternative mechanisms [NCIT:C25343] plants use to obtain [NCIT:C52349] or produce [SIO:001106] energy [PATO:0001021] (carbohydrates [CHEBI:16646]) or nutrients [CHEBI:33284]. Trait indicating the strategies used by a plant to obtain or produce energy (carbohydrates) or nutrients, including photosynthesis and various saprophytic and carnivorous energy and nutrient acquisition mechanisms. |
comments |
Although the majority of vascular plants use photosynthesis to produce their own carbohydrates, this trait mostly includes data for the few taxa that are not photosynthetic. Likewise, it captures alternative nutrient acquisition strategies. See also the trait parasitic which captures data on whether plants are parasitic (or partially parasitic), forming haustoria to penetrate their host plant. The trait root_structures includes specialised root structures
|
value type | categorical variable |
has narrower |
plant_alternative_energy_and_nutrient_acquisition_strategy_saprophyte Plant that acquires nutrients from decaying biomass. plant_alternative_energy_and_nutrient_acquisition_strategy_carnivorous Plant that acquires some or most of its nutrients from animals or protozoa. plant_alternative_energy_and_nutrient_acquisition_strategy_nutrient_mining Plant that uses a specialised root structure, such as cluster roots, to mine nutrients inaccessible to other plant taxa. |
has broader | whole plant phenotype trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
organismal quality mechanism |
keyword |
energy carbohydrate nutrient growth |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Nutritional relationships [BROT:18] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 31/10/2022 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030017 |
Woodiness
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030018 |
alternative label | woodiness |
description |
A whole plant [PO:0000003] phenotype [NCIT:C16977] trait which indicates whether the plant stem [PO:0009047] (the vegetative shoot system [PO:0025607]) is woody, with <U+00E2><U+20AC><U+0153>woody<U+00E2><U+20AC><U+009D> defined to include both plant stems with secondary xylem (true wood) [PO:0005848] and those with wood-like lignification [CHEBI:6457] (woodiness in monocots and ferns). A binary trait, indicating whether a plant’s stems are woody, with woody broadly defined to include both true wood (secondary xylem) and taxa that do not produce secondary xylem (i.e. monocots and ferns) but have thick, stiff, robust lignified stems.
|
comments |
This trait considers all species that have stiff lignified stems as woody and those that lack such stems as herbaceous . See the trait plant woodiness detailed for sub-categories of woody that indicate the extent and type of woodiness present in a plant stem.
|
value type | categorical variable |
has narrower |
woodiness_herbaceous Plant with non-lignified stems. woodiness_woody Plant whose stems are stiff and lignified, including both stems that produce secondary xylem and those that produce only lignified primary tissues but are notably stiff and robust. |
has broader |
whole plant phenotype trait stem morphology trait |
plant structure plant structure |
whole plant stem |
measured characteristic |
composition structure |
keyword |
wood, secondary xylem lignin shoot axis woodiness wood herbaceous |
scope note | Vascular plants |
has exact match | |
has close match |
shoot axis woodiness woody plants |
has related match | |
examples |
close match: Woodiness [TOP706] (https://top-thesaurus.org/index) close match: Plant woodiness [TRY:38] (https://www.try-db.org/de/de.php) close match: woodiness and stem specific density [LEDA:3.1] (https://uol.de/en/landeco/research/leda/standards) exact match: whole plant woodiness [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references |
Simpson 2019 LEDA Data Standards 2005 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030018 |
Detailed woodiness categories
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030019 |
alternative label | woodiness_detailed |
description |
A whole plant [PO:0000003] phenotype [NCIT:C16977] trait which indicates the vertical [PATO:0001854] extent, distribution [PATO:0000060], and type [NCIT:C25284] of wood present in stems [PO:0009047], roots [PO:0009005], and reproductive shoot systems [PO:0025082], distinguishing between plants with secondary xylem (true wood) [PO:0005848] versus wood-like lignification [CHEBI:6457] (woodiness in monocots and ferns). Trait indicating the extent, distribution, and type of secondary xylem (true wood) and wood-like lignification (woodiness in monocots and ferns) in stems, roots, and reproductive shoots. |
comments |
This trait documents in detail the degree and type of lignification in a plant’s stems and roots (woodiness), while plant woodiness is a binary trait collapsing woodiness into a pair of values, woody versus herbaceous . Datasets that only use the terms woody versus herbaceous are only mapped to the binary trait; only datasets that explicitly indicate different levels of woodiness are mapped to plant woodiness detailed .
|
value type | categorical variable |
has narrower |
woodiness_detailed_herbaceous Plant with non-lignified stems. woodiness_detailed_woody Plant whose stems produce secondary xylem (true wood). woodiness_detailed_woody_base Plant where secondary xylem (true wood) is present only at the base of stems. (Synonyms, suffrutescent) woodiness_detailed_woody_root Plant that has a woody rootstock but non-woody above-ground stems. woodiness_detailed_semi_woody Plant that forms stems considered only ‘partially woody’, generally having lower lignin and cellulose contents and possibly not forming secondary xylem. These are generally short-lived, fast-growing stems. (Synonyms, green-stem shrub, soft shrub, soft wood) woodiness_detailed_woody_like_stem Taxa, including monocots and ferns, that produce thick, stiff, robust lignified stems but do not produce secondary xylem. woodiness_detailed_woody_like_inflorescence Taxa, including monocots, that produce thick, stiff, robust lignified inflorescence shoots but are otherwise non-woody. |
has broader |
whole plant phenotype trait stem morphology trait |
plant structure plant structure plant structure plant structure |
whole plant stem root reproductive shoot system |
measured characteristic |
composition structure spatial pattern, distribution |
keyword |
wood, secondary xylem lignin shoot axis woodiness wood herbaceous |
scope note | Vascular plants |
has exact match | |
has close match |
shoot axis woodiness woody plants |
has related match | |
examples |
close match: Woodiness [TOP706] (https://top-thesaurus.org/index) close match: Plant woodiness [TRY:38] (https://www.try-db.org/de/de.php) close match: woodiness and stem specific density [LEDA:3.1] (https://uol.de/en/landeco/research/leda/standards) close match: whole plant woodiness [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references |
Simpson 2019 LEDA Data Standards 2005 Carlquist 2013 |
date created | 31/10/2022 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030019 |
Physical defence structures
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030020 |
alternative label | plant_physical_defence_structures |
description |
A plant structure morphology trait [TO:0000839] which indicates the plant structures [PO:0009011] used for defence [NCIT:C61556], including spine leaves [PO:0025173], spine stipules [PO:0025174], spine petiole [PO:0025613], thorns [PO:0025172], and prickles [PO:0025169]. The presence (or explicit absence) of specific physical defence structures on a plant, including spines, thorns, prickles, and sharp-tipped leaves. |
comments |
This trait identifies explicit physical defence structures on a plant. The trait plant_spinescence indicates the degree of defence afforded to plants, with values defined by P<U+00C3><U+00A9>rez-Harguindeguy et al. 2013 (doi:10.1071/BT12225).
|
value type | categorical variable |
has narrower |
plant_physical_defence_structures_absent Plant that lacks a physical defence structure. plant_physical_defence_structures_sharp_pointed_defence Plant that has either spines, thorns, or prickles but the type of physical defence structure is not specified. plant_physical_defence_structures_prickle A sharp-tipped outgrowth from the epidermis, bark or other plant organ that is explicitly not a spine (modified leaf) or thorn (modified stem). plant_physical_defence_structures_pungent_leaf_apex A sharp-tipped leaf. plant_physical_defence_structures_spine A sharp-pointed structure, which is a modified leaf or leaf part, including petioles, midribs, secondary veins, leaflets, or stipules. plant_physical_defence_structures_stinging_or_irritant_hairs Trichomes that sting or irritate, by injecting a toxin. plant_physical_defence_structures_thorn A sharp-pointed, stiff, woody modified stem. |
has broader |
plant structure morphology trait leaf morphology trait stem morphology trait bark morphology trait |
plant structure plant structure plant structure plant structure |
leaf stem bark whole plant |
measured characteristic |
structure surface feature shape shape |
keyword |
spine leaf spine stipule thorn prickle defense spine petiole |
scope note | none |
has exact match | |
has close match | plant defense |
has related match | |
examples |
close match: Leaf emergences (pubescence, pruinescence, hairs, spines, thorns) [TRY:677] (https://www.try-db.org/de/de.php) close match: Shoot emergences (pubescence, hairs, spines, thorns) [TRY:1255] (https://www.try-db.org/de/de.php) close match: Stem emergences (pubescence, hairs, spines, thorns) [TRY:1256] (https://www.try-db.org/de/de.php) close match: Leaf_spines_1 [GIFT:4.13.1] (https://gift.uni-goettingen.de) close match: Leaf_thorns_1 [GIFT:4.14.1] (https://gift.uni-goettingen.de) close match: Defence [GIFT:6.5] (https://gift.uni-goettingen.de) related match: Basic leaf shape [BROT:5] (http://doi.org/10.1038/sdata.2018.135) close match: Armature [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) |
references |
Simpson 2019 Hanley 2007 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | physical_defence |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030020 |
Plant climbing mechanisms
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030021 |
alternative label | plant_climbing_mechanism |
description |
A whole plant [PO:0000003] phenotype [NCIT:C16977] trait that indicates stem [PO:0009047] and leaf [PO:0025034] structures [PATO:0000141] and physical mechanisms [NCIT:C25343] a plant uses to climb [NCIT:C81002] up other plants or substrates. Mechanisms plants use to climb, including both specialised leaf and stem adaptations and stem growth habits. |
comments | |
value type | categorical variable |
has narrower |
plant_climbing_mechanism_adventitious_roots Roots arising from stem nodes which cling to a host plant. plant_climbing_mechanism_hooks Curved stem outgrowths which allow climbers to cling to a host plant. plant_climbing_mechanism_spines Straight stem outgrowths (including true spines as well as thorns and prickles) which allow climbers to cling to a host plant. plant_climbing_mechanism_tendrils Modified leaves, petioles, or specialised axillary shoots that coil tightly, forming a specialised structure for climbing. plant_climbing_mechanism_scrambling Stem growth habit, where the plant stems are too weak to support themselves, and instead lean on and are supported by host vegetation. There are no specialised structures employed. plant_climbing_mechanism_twining Stem growth habit, where the plant stems twist or coil around a host plant to provide support. |
has broader |
whole plant phenotype trait leaf morphology trait stem morphology trait |
plant structure plant structure plant structure |
whole plant stem leaf |
measured characteristic |
structure mechanism |
keyword |
climbing appendage |
scope note | climbing and scrambling plants |
has exact match | |
has close match | |
has related match | |
examples | related match: Plant growth form [TRY:42] (https://www.try-db.org/de/de.php) |
references |
Simpson 2019 Gallagher 2012 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | vine_climbing_mechanism |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030021 |
Plant succulence
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030022 |
alternative label | plant_succulence |
description |
A whole plant [PO:0000003] phenotype [NCIT:C16977] trait that indicates whether any plant tissues [CARO:0000043] are succulent [FLOPO:0900041], indicating they are thick [PATO:0000591] and fleshy [PATO:0002351], generally storing water [CHEBI:15377] as a drought tolerance [TO:0000276] adaptation or filling with water as a salt tolerance [TO:0006001] adaptation. Trait indicating whether the leaves or stems of a plant are thick and fleshy because they store water, generally an adaptation to arid or salty environments. |
comments |
Succulence generally has either a water storage function or is a mechanism to cope with (or thrive in) saline conditions. See the categorical trait plant_tolerance_salt for plant salt tolerance and salt avoidance strategies and the numeric trait plant_tolerance_soil_salinity for the soil salinity a plant can tolerate.
|
value type | categorical variable |
has narrower |
plant_succulence_succulent_stems Stems are thick and fleshy. plant_succulence_succulent_leaves Leaves are thick and fleshy. plant_succulence_succulent A plant is designated as succulent but it is not specified which tissues are thick and fleshy. plant_succulence_semi-succulent A plant has tissues that are somewhat thick and fleshy, including many chenopods. plant_succulence_not_succulent Neither stems nor leaves are thick and fleshy. |
has broader |
whole plant phenotype trait environmental tolerance trait stem morphology trait leaf morphology trait |
plant structure plant structure plant structure |
whole plant stem leaf |
measured characteristic |
structure organismal quality |
keyword |
tissue succulence water drought tolerance salt tolerance salinity fleshy |
scope note | none |
has exact match | tissue succulence |
has close match | |
has related match | |
examples |
related match: Plant growth form [TRY:42] (https://www.try-db.org/de/de.php) exact match: Succulence [GIFT:4.16.1] (https://gift.uni-goettingen.de) related match: Basic leaf shape [BROT:5] (http://doi.org/10.1038/sdata.2018.135) |
references |
Pérez-Harguindeguy 2013 Simpson 2019 Ogburn & Edwards 2010 |
date created | 31/10/2022 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030022 |
Stem growth habit
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030023 |
alternative label | stem_growth_habit |
description |
A whole plant [PO:0000003] phenotype [NCIT:C16977] trait that indicates the structure [PATO:0000141] and 3-dimensional extent [PATO:0001710] of a plant’s vegetative shoot system [PO:0025607], including the position [PATO:0000140] of stems [PO:0009047], degree of branchiness [PATO:0002009], density [PATO:0001019] of branches [PO:0025073], and branch angles [PATO:0002326] relative to each other and the ground surface [sweetontology.net/realmSoil/Ground]. Trait characterising a stem’s structure and 3-dimensional extent, including the position of stems, degree of branchiness, density of branches, and branch angles relative to other branches and the ground surface. |
comments | This trait captures how a plant explores 3-dimensional space, with trait values predominantly adjectives that modify the core plant growth forms. |
value type | categorical variable |
has narrower |
stem_growth_habit_arborescent Tree-like growth habit. stem_growth_habit_erect Stems that grow upright. stem_growth_habit_caespitose Multiple short-shoots arise from the base of the plant forming a dense tuft, as in a bunch-grass. (Synonyms, cespitose, bunch-grass, tussock) stem_growth_habit_cushion-forming Multiple erect, short stems arise from the soil and are so tightly packed that they form dense, even, rounded canopy with no gaps. (Synonyms, cushion) stem_growth_habit_mat-forming Multiple stems that are mostly horizontal and are densely packed but open enough that there are still a few gaps between them. stem_growth_habit_tufted Plant has a dense clump of leaves, either at the base of the plant or clusters of leaves growing close together higher on the plant. This term can refer to grasses, shrubs, or trees. stem_growth_habit_creeping Stem that creeps along the ground, rooting at nodes. (Synonyms, repent) stem_growth_habit_decumbent Stems whose bases lie flat on the ground but whose tips grow upward. (Synonyms, ascending) stem_growth_habit_prostrate Stems lie flat on the ground but do not root at nodes. (Synonyms, procumbent, reclining, trailing) stem_growth_habit_rosette Plants whose leaves radiate from a central point at or near ground level. (Synonyms, acaulescent, rosulate) stem_growth_habit_climbing Stem that does not have a self-supporting structure and ascends by leaning on or attaching itself to surrounding vegetation or another substrate. Climbing mechanisms include tendrils, petioles, adventitious roots, scrambling, and twining and are distinguished between in the trait plant_climbing_mechanism .stem_growth_habit_sprawling Stem that sprawls across other plants or objects but lacks specialised climbing structures or mechanisms. (Synonyms, clambering, scandent) stem_growth_habit_rhizomatous Plants with short horizontal underground stems from which shoots emerge. stem_growth_habit_stoloniferous Plants with long horizontal branches either slightly belowground or aboveground, that root at their nodes or tips, producing new plants. (Synonyms, sarmentose) stem_growth_habit_spreading Plants with a notable horizontal extent, referring either to a broad tree canopy or a shrub or herb that spreads across the ground. stem_growth_habit_floating Plant where most of the leaves are floating on water. stem_growth_habit_submerged Plant where most of the leaves are submerged beneath the surface of a waterbody. stem_growth_habit_dense Plant with a high density of branches. stem_growth_habit_compact Plant with closely packed branches. stem_growth_habit_bushy Plant with much-branched branches. (Synonyms, shrubby) stem_growth_habit_open Plant with an open architecture of branches. stem_growth_habit_spindly Plants with weak, skinny branches. |
has broader |
whole plant phenotype trait stem morphology trait |
plant structure plant structure plant structure |
whole plant stem leaf |
measured characteristic |
shape 3-D extent position angle structure spatial pattern, distribution |
keyword |
vegetative shoot system branchiness growth |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
related match: Shoot growth form [LEDA:3.2] (https://uol.de/en/landeco/research/leda/standards) related match: Leaf distribution along the stem [LEDA:3.3] (https://uol.de/en/landeco/research/leda/standards) exact match: Shoot_orientation [GIFT:1.9.1] (https://gift.uni-goettingen.de) related match: Climber_2 [GIFT:1.4.2] (https://gift.uni-goettingen.de) |
references | Simpson 2019 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | growth_habit |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030023 |
Leaf phenology
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030024 |
alternative label | leaf_phenology |
description |
A whole plant [PO:0000003] phenotype [NCIT:C16977] trait characterising whether there is a part of the year when a plant sheds all leaves [PO:0025034] (shedability [PATO:0001729]) and the environmental conditions [ENVO:01000203] that cause a plant to shed its leaves. Trait indicating whether a plant retains a leaf canopy throughout the year and what environmental cues are associated with canopy shedding. |
comments | |
value type | categorical variable |
has narrower |
leaf_phenology_deciduous Plant loses its entire leaf canopy for part of the year, in response to either drought or cold. leaf_phenology_evergreen Plant retains a leaf canopy throughout the year. leaf_phenology_cold_deciduous Plant loses its entire leaf canopy for part of the year, in response to cold. leaf_phenology_drought_deciduous Plant loses its entire leaf canopy for part of the year, in response to drought. leaf_phenology_facultative_drought_deciduous Plant sometimes loses its leaf canopy for part of the year, in response to drought. leaf_phenology_semi_deciduous Plant thins, but does not entirely lose, its leaf canopy in response to an environmental cue, usually drought. leaf_phenology_brevi_deciduous Plant briefly loses its entire leaf canopy but flushes a new leaf canopy almost simultaneously to leaf loss. |
has broader | plant phenological trait |
plant structure plant structure |
leaf whole plant |
measured characteristic |
organismal quality temporal pattern response to sensitivity |
keyword |
shedability environmental condition evergreen deciduous |
scope note | Plants with leaves. |
has exact match | |
has close match | |
has related match | shedability |
examples |
exact match: Phenology [TOP700] (https://top-thesaurus.org/index) exact match: Leaf phenology type [TRY:37] (https://www.try-db.org/de/de.php) exact match: Deciduousnes_1 [GIFT:2.4.1] (https://gift.uni-goettingen.de) exact match: whole plant vegetative phenology [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Leaf phenology [BROT:4] (http://doi.org/10.1038/sdata.2018.135) |
references | Williams 1997 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030024 |
Leaf lifespan
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030025 |
alternative label | leaf_lifespan |
description |
The duration [PATO:0001309] that an individual leaf [PO:0025034] is attached to the stem [PO:0009047] and is physiologically functional [PATO:0001510]. Duration of time that an individual leaf is attached to the stem and physiologically functional; leaf longevity. |
comments | Leaf lifespan is the inverse of the rate of leaf turnover. For some species, leaflets or other portions of a leaf may be censused rather than the entire leaf lamina. Leaf lifespan can be censused as either the rate of shedding leaves (leaf death) or the rate of formation of new leaves (leaf birth). |
value type | continuous variable |
unit |
mo month |
minAllowedValue | 1 |
maxAllowedValue | 1000 |
has broader | plant phenological trait |
plant structure | leaf |
measured characteristic |
time duration |
keyword |
shedability longevity |
scope note | applicable to plants with leaves |
has exact match | leaf longevity time |
has close match | |
has related match | |
examples |
exact match: Leaf life span [TOP254] (https://top-thesaurus.org/index) exact match: Leaf lifespan (longevity) [TRY:12] (https://www.try-db.org/de/de.php) exact match: leaf life span [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Average leaf lifespan [BROT:3] (http://doi.org/10.1038/sdata.2018.135) |
references |
Pérez-Harguindeguy 2013 Wright & Cannon 2001 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030025 |
Competitive stratum
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030026 |
alternative label | competitive_stratum |
description |
A classification [NCIT:C25161] that indicates the vegetation layer [ENVO:01000355] a taxon [NCIT:C40098] reaches within its community [ECSO:00000310], used to assess competition [EnvThes:21097] within the community. Categorical descriptions of a taxon’s relative stature in its community, used to assess competitive heirarchies within a community. |
comments | |
value type | categorical variable |
has narrower |
competitive_stratum_ground Graminoids, herbs and ferns reaching maximum heights of c. 0.2-1 m. competitive_stratum_mid Shrubs reaching maximum heights of c. 1-2 m. competitive_stratum_upper Tall shrubs reaching maximum heights of c. 3-5 m. competitive_stratum_post_fire_ephemeral Taxa that avoid competition with other strata by rapidly completing their life cycle after fire; a sub-category of ‘ground’. |
has broader | whole plant phenotype trait |
plant structure | whole plant |
measured characteristic |
organismal quality height |
keyword |
vegetation layer community competition vegetation |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: UnderstoreyCanopy [PalmTraits] (https://doi.org/10.1038/s41597-019-0189-0) |
references |
Keith 2007 Gosper 2012 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030026 |
Plant nitrogen fixation capacity
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030027 |
alternative label | nitrogen_fixing |
description |
A trait which indicates whether a plant has the capacity to engage in symbioses [GO:0044403] with microorganisms [NCIT:C14329] (bacteria [NCIT:C14187], cyanobacteria [NCBITaxon:1117], and fungi [NCBITaxon:4751]) capable of nitrogen fixation [GO:0009399] and usually identified by nodulation [GO:0009877] on the plant roots [PO:0009005]. Binary variable describing whether a plant has the capacity for nitrogen fixatation, indicating it engages in symbioses with microorganisms (most commonly bacteria or cyanobacteria) that are capable of nitrogen fixation. Nitrogen fixation capacity is usually identified by nodules on the plant roots. |
comments | |
value type | categorical variable |
has narrower |
nitrogen_fixing_non_nitrogen_fixer Plant does not host nitrogen-fixing microbes. nitrogen_fixing_nitrogen_fixer Plant hosts nitrogen-fixing microbes in root nodules. |
has broader |
interspecific interactions trait root morphology trait |
plant structure plant structure |
whole plant root |
measured characteristic | organismal quality |
keyword |
biological process involved in symbiotic interaction, symbiosis nitrogen fixation nodulation microorganism mutualism symbiosis |
scope note | |
has exact match | nitrogen symbiotic fixation |
has close match | |
has related match | root nodule number |
examples |
exact match: Plant nitrogen(N) fixation capacity [TRY:8] (https://www.try-db.org/de/de.php) exact match: Nitrogen_fix_1 [GIFT:4.5.1] (https://gift.uni-goettingen.de) close match: Nutritional relationships [BROT:18] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030027 |
Plant root structures
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030028 |
alternative label | root_structure |
description |
A trait which indicates types [NCIT:C25284] of root [PO:0009005] structures [PATO:0000141], including structures associated with mutualisms [GO:0085030] with mycorrhizae [EnvThes:20656]. Specific specialized types of root structures and root symbioses, especially symbioses with mycorrhizal fungi. |
comments | |
value type | categorical variable |
has narrower |
root_structure_arbuscular_mycorrhizal Symbiosis in which the mycorrhizal fungi does penetrate the cortex cells of the plant roots and its hyphae form arbuscules and vesicles inside the plant root; endomycorrhizal, AM, VAM. root_structure_carnivorous Plant has non-mycorrhizal carnivorous root. root_structure_cluster_roots Non-proteoid taxa with cluster roots. root_structure_coiling_vam Associations that spread predominantly by intracellular hyphal coils within roots. root_structure_dauciform_root A type of cluster root found in the family Cyperaceae. root_structure_ectomycorrhizal Symbiosis in which the mycorrhizal fungi does not penetrate the cortex cells of the plant roots. root_structure_ericoid_mycorrhizal A form of arbuscular mycorrhizal relationship only found on plants in the order Ericales. The fungi’s hyphae penetrate the plant root but do not form arbuscules. root_structure_fine_roots Particularly fine roots for nutrient uptake. root_structure_haustorium A highly modified stem or root of a parasitic plant, such as mistletoe , or a specialized branch or tube originating from a hairlike filament (hypha) of a fungus. The haustorium penetrates the tissues of a host and absorbs nutrients and water. root_structure_hemiparasitic_root Plant with a partially parasitic root. root_structure_long_root_hairs Plant with specialised long root hairs. root_structure_mycorrhizal Plant mycorrhizal but type not specified. root_structure_non_mycorrhizal Plants lacking a mycorrhizal symbiont. root_structure_orchid_mycorrhizal A mycorrhizal relationship specific to orchid taxa, and for most orchids, essential for seedlings to establish. root_structure_parasitic_root Plant with a parasitic root. root_structure_proteoid_root Also known as cluster roots, are plant roots that form clusters of closely spaced short lateral rootlets and aid in nutrient upake in nutrient-poor soils; common in members of the family Proteaceae but present in other families as well. root_structure_root_hairs Plant with specialised root hairs. root_structure_sand-binding Persistent sheaths of sand that form around the roots of taxa in the families Restionaceae, Cyperaceae, Haemodoraceae, and Lomandraceae in western Australia. Assumed to function in nutrient uptake. root_structure_saprophyte Plant that acquires nutrients from decaying biomass. root_structure_subepidermal_mycorrhizal Mycorrhizae where hyphae grow in a cavity under epidermal cells. Only in the genus Thysanotus (family Laxmaniaceae). root_structure_unknown Root structures unknown. |
has broader |
interspecific interactions trait root morphology trait |
plant structure plant structure |
whole plant root |
measured characteristic |
organismal quality structure |
keyword |
mutualism mycorrhizae arbuscular mycorrhizal association biological process involved in symbiotic interaction, symbiosis haustorium microorganism symbiosis |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Mycorrhiza type [TRY:7] (https://www.try-db.org/de/de.php) exact match: Mycorrhiza_1 [GIFT:6.4.1] (https://gift.uni-goettingen.de) close match: Nutritional relationships [BROT:18] (http://doi.org/10.1038/sdata.2018.135) |
references | Brundrett 2008 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030028 |
Plant parasitism status
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030029 |
alternative label | parasitic |
description |
A whole plant [PO:0000003] phenotype [NCIT:C16977] trait that indicates if a plant is involved in a parasitic [ECOCORE:00000146] symbiosis [ECOCORE:00000022] where it forms haustorium [GO:0085035] on a host [GO:0018995] plant and the host plant provides all or some of its high energy [PATO:0001021] carbon [CHEBI:27594] compounds [NCIT:C43366], mineral nutrition (nutrients [CHEBI:33284]) and/or water [CHEBI:15377]. Trait indicating whether a plant forms haustoria and obtains part or all of its energy-rich carbon compounds (photosynthetic sugars), mineral nutrition and/or water directly from another plant (its host) in an interaction that does not benefit the host plant. |
comments |
Plants described as parasitic in the context of this trait always have haustoria, specialised organs that penetrate the host plants’s vascular bundles. The trait root_structures documents symbiotic relationships with fungi. The trait plant_energy_acquisition_strategy documents specialised strategies or specialised organs or tissues plants use to obtain carbon or mineral nutrition.
|
value type | categorical variable |
has narrower |
parasitic_hemiparasitic Plant that is photosynthetic but augments its energy, mineral nutrition, and /or water supply through parasitism. This trait value does not distinguish between obligate hemiparasites, plants which require a host for at least part of their life cycle, and facultative hemiparasites, plants which can grow and reproduce without a host. parasitic_hemiparasitic_obligate Plant that is photosynthetic but requires a host for at least part of its life cycle. parasitic_hemiparasitic_facultative Plant that is photosynthetic and can grow and reproduce without a host but augments its energy, mineral nutrition, and /or water supply through parasitism. parasitic_holoparasitic Plant that obtains all (or nearly all) of its energy through parasitism. parasitic_parasitic Plant that obtains some energy, mineral nutrition and/or water through parasitism. This term is used if a dataset does not specify if a plant is a hemiparasite or a holoparasite. parasitic_not_parasitic In the context of this trait, a plant that does not acquire energy, mineral nutrition, and/or water via haustoria connected to another plant. It can include species that form a symbiosis, including a parasitic interaction, with a fungal partner. parasitic_root_parasitic Parasitic plant whose haustoria penetrate the root of a host plant. parasitic_stem_parasitic Parasitic plant whose haustoria penetrate the stem of a host plant. |
has broader | interspecific interactions trait |
plant structure | whole plant |
measured characteristic |
organismal quality structure |
keyword |
parasite symbiosis haustorium energy nutrient parasitism biological process involved in symbiotic interaction, symbiosis |
scope note | none |
has exact match | |
has close match | |
has related match | |
examples |
close match: Parasite_1 [GIFT:1.5.1] (https://gift.uni-goettingen.de) close match: Nutritional relationships [BROT:18] (http://doi.org/10.1038/sdata.2018.135) |
references |
Simpson 2019 Nickrent & Musselman 2004 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/10/2022 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Ian J. Wright Peter Vesk Gregory J. Jordan Andy Leigh Patricia Lu-Irving Lily Dun David Coleman |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030029 |
Foliage time
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030030 |
alternative label | foliage_time |
description |
A plant phenological trait [TO:0000933] which is the months [UO:0000035] during which a plant [PO:0000003] has leaves [PO:0025034]. Months during which taxon has leaves. |
comments | Trait keyed as a sequences of 12 Ns (without foliage) and Ys (with foliage), representing the 12 months, starting with January. |
value type | categorical variable |
has broader |
plant phenological trait environmental tolerance trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
time duration temporal pattern |
keyword |
shedability environmental condition evergreen deciduous plant phenological trait |
scope note | |
has exact match | |
has close match | |
has related match | vegetative growth time |
examples | close match: Leaf phenology [BROT:4] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 01/04/2025 |
date modified | 03/06/2025 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030030 |
Plant sex type
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030060 |
alternative label | sex_type |
description |
A plant structure morphology trait [TO:0000839] which is the distribution [PATO:0000060] of male [PATO:0000384], female [PATO:0000383], and hermaphroditic [PATO:0001340] flowers [PO:0009046] on one individual [EFO:0000542] and across multiple individuals in a population [PCO:0000001]. Plant sex type, indicating, for a taxon the type of flowers (male, female, and hermaphroditic) present on individual plants versus separate plants within a population. |
comments | |
value type | categorical variable |
has narrower |
sex_type_androdioecious Taxa in which hermaphroditic and staminate (male) plants coexist within a population. sex_type_andromonoecious Taxa with hermaphrodite flowers and staminate flowers (producing just male gametes) on the same plant but no pistillate (female) flowers. sex_type_dioecious Taxa that produce male and female flowers on separate plants. sex_type_gynodioecious Taxa in which hermaphroditic and pistillate (female) plants coexist within a population. sex_type_gynomonoecious Taxa with hermaphrodite flowers and pistillate flowers (producing just female gametes) on the same plant but no staminate (male) flowers. sex_type_hermaphrodite Taxa with flowers that produce both male and female gametes; bisexual. sex_type_monoecious Taxa that have both male and female flowers on the same plant but an individual flower produces only male or female gametes. sex_type_polygamous Taxa with both unisexual and bisexual flowers on the same plant. sex_type_polygamodioecious Taxa where some flowers on a plant are hermaphrodite and other are pistillate (female) or staminate (male). sex_type_polygamonoecious Taxa where some plants in a population have hermaphrodite and pistillate (female) flowers and others have hermaphrodite and staminate (male) flowers. sex_type_trioecious Taxa where plants in a population have either hermaphroditic (bisexual) flowers, pistillate (female) flowers, or staminate (male) flowers. sex_type_unknown Inadequate information to assign a sex type. |
has broader | plant structure morphology trait |
plant structure plant structure |
whole plant flower |
measured characteristic |
organismal quality spatial pattern, distribution |
keyword |
hermaphrodite phenotypic sex |
scope note | |
has exact match | |
has close match | mating system |
has related match | |
examples |
exact match: Plant dicliny type [TOP295] (https://top-thesaurus.org/index) exact match: Flower sexual syndrome (dichogamy, cleistogamy, dioecious, monoecious) [TRY:915] (https://www.try-db.org/de/de.php) close match: Reproduction_sexual_1 [GIFT:3.4.1] (https://gift.uni-goettingen.de) exact match: whole plant sexual system [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030060 |
Pollination syndrome
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030061 |
alternative label | pollination_syndrome |
description |
A classification [NCIT:C25161] based on a taxon’s [NCIT:C40098] flower morphology traits [TO:0000499] that indicates the taxa (biotic vectors) or abiotic mechanisms [NCIT:C25343] that most likely pollinate [GO:0009856] a flower [PO:0009046]. For a given taxon, the biotic vectors (including explicit taxa) or abiotic mechanisms that are most likely to pollinate its flowers, based on the taxon’s flower morphology. |
comments | Trait values include both very specific terms and quite general ones, reflecting the variation in detail provided across studies. |
value type | categorical variable |
has narrower |
pollination_syndrome_abiotic Floral syndrome indicates pollination occurs through wind, water, or collision of free-floating particles. pollination_syndrome_biotic Floral syndrome suggests flowers are pollinated by a biotic agent. pollination_syndrome_animal Floral syndrome suggests flowers are animal-pollinated. pollination_syndrome_ballistic Floral syndrome suggests pollen is launched away from the plant by explosion. pollination_syndrome_bat Floral syndrome suggests flowers are bat-pollinated. pollination_syndrome_bee Floral syndrome suggests flowers are bee-pollinated. pollination_syndrome_beetle Floral syndrome suggests flowers are beetle-pollinated. pollination_syndrome_bird Floral syndrome suggests flowers are bird-pollinated. pollination_syndrome_butterfly Floral syndrome suggests flowers are butterfly-pollinated. pollination_syndrome_fly Floral syndrome suggests flowers are fly-pollinated. pollination_syndrome_insect Floral syndrome suggests flowers are insect-pollinated, type of insect not specified. pollination_syndrome_mammal Floral syndrome suggests flowers are mammal-pollinated. pollination_syndrome_moth Floral syndrome suggests flowers are moth-pollinated. pollination_syndrome_thrip Floral syndrome suggests flowers are thrip-pollinated. pollination_syndrome_vertebrate Floral syndrome suggests flowers are vertebrate-pollinated (bats, birds, mammals or lizards). pollination_syndrome_wasp Floral syndrome suggests flowers are wasp-pollinated. pollination_syndrome_water Floral syndrome suggests flowers are water-pollinated. pollination_syndrome_wind Floral syndrome suggests flowers are wind-pollinated. pollination_syndrome_self Floral syndrome suggests flowers are primarily self-pollinating. pollination_syndrome_pollination_rare Plants mostly reproduce through vegetative spread and flowering is rare. |
has broader |
floral organ morphology trait interspecific interactions trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
organismal quality mechanism |
keyword |
pollination mutualism biological process involved in symbiotic interaction, symbiosis pollinator reproduction symbiosis |
scope note | applicable to seed plants (gymnosperms and angiosperms) |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Flower pollination syndrome [TOP333] (https://top-thesaurus.org/index) exact match: Pollination syndrome [TRY:29] (https://www.try-db.org/de/de.php) exact match: Pollination syndrome [GIFT:3.6] (https://gift.uni-goettingen.de) exact match: flower pollination syndrome [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references |
Ollerton 2019 Dellinger 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 23/02/2023 |
reviewed by | Ruby Stephens |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030061 |
Pollination system
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030062 |
alternative label | pollination_system |
description |
A classification [NCIT:C25161] based on explicit field studies of pollination [GO:0009856] in the taxon’s [NCIT:C40098] native range (preferred) or else a combination of a taxon’s flower morphology traits [TO:0000499] (that suggest specific [NCIT:C38024] taxa (biotic vectors) or abiotic mechanisms [NCIT:C25343] that most likely pollinate [GO:0009856] a flower [PO:0009046]) and the pollinators actually observed visiting the taxon’s flower. For a given taxon, the biotic vectors (including explicit taxa) or abiotic mechanisms that are most likely to pollinate its flowers, based on explicit field studies of pollination in the taxon’s native range (preferred) or else a combination of possible pollinators observed visiting a taxon’s flowers and the taxon’s flower morphology. |
comments | Trait values include both very specific terms and quite general ones, reflecting the variation in detail provided across studies. |
value type | categorical variable |
has narrower |
pollination_system_abiotic Observations indicate pollination occurs through wind, water, or collision of free-floating particles. pollination_system_biotic_unspecialised Taxa are pollinated by a biotic agent, but do not have a specialist pollinator. pollination_system_biotic_specialised Taxa depend upon a specialist pollinator for pollen transfer. pollination_system_animal Flowers are observed to be animal-pollinated. pollination_system_ballistic Pollen is observed to be launched away from the plant by explosion. pollination_system_bat Flowers are observed to be bat-pollinated. pollination_system_bee Flowers are observed to be bee-pollinated. pollination_system_beetle Flowers are observed to be beetle-pollinated. pollination_system_bird Flowers are observed to be bird-pollinated. pollination_system_butterfly Flowers are observed to be butterfly-pollinated. pollination_system_fly Flowers are observed to be fly-pollinated. pollination_system_insect Flowers are observed to be insect-pollinated, type of insect not specified. pollination_system_mammal Flowers are observed to be mammal-pollinated. pollination_system_moth Flowers are observed to be moth-pollinated. pollination_system_thrip Flowers are observed to be thrip-pollinated. pollination_system_vertebrate Flowers are observed to be vertebrate-pollinated (bats, birds, mammals or lizards). pollination_system_wasp Flowers are observed to be wasp-pollinated. pollination_system_water Flowers are observed to be water-pollinated. pollination_system_wind Flowers are observed to be wind-pollinated. pollination_system_self Flowers are self-pollinated. |
has broader |
floral organ morphology trait interspecific interactions trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
organismal quality mechanism |
keyword |
pollination mutualism biological process involved in symbiotic interaction, symbiosis pollinator reproduction symbiosis |
scope note | applicable to seed plants (gymnosperms and angiosperms) |
has exact match | |
has close match | |
has related match | |
examples |
close match: Pollination syndrome [TRY:29] (https://www.try-db.org/de/de.php) close match: Self_fertilization_1 [GIFT:3.1.1] (https://gift.uni-goettingen.de) |
references | Ollerton 2019 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 23/02/2023 |
reviewed by | Ruby Stephens |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030062 |
Plant genome size
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030080 |
alternative label | genome_size |
description |
The total mass [PATO:0000125] of chromosomes [NCIT:C13202] that comprise a plant’s genome [OMIT:0027643] in a somatic cell [CL:0002371]. Mass of all chromosomes, the genome, in a somatic cell. |
comments | |
value type | continuous variable |
unit |
pg picogram |
minAllowedValue | 0.5 |
maxAllowedValue | 100 |
has broader | genetic structure trait |
plant structure | whole plant |
measured characteristic | mass |
keyword |
genome size somatic cell chromosome |
scope note | |
has exact match | genome size |
has close match | |
has related match | |
examples | exact match: Species genotype: genome size [TRY:1022] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030080 |
Chromosome ploidy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030081 |
alternative label | ploidy |
description |
The count [NCIT:C25463] of copies of each chromosome [NCIT:C13202] present in a somatic cell [CL:0002371]. Chromosome ploidy, the number of copies of each chromosome present in a somatic cell. |
comments | |
value type | continuous variable |
unit | {count} |
minAllowedValue | 1 |
maxAllowedValue | 4 |
has broader | genetic structure trait |
plant structure | whole plant |
measured characteristic |
has number of count |
keyword |
somatic cell chromosome ploidy |
scope note | |
has exact match |
ploidy ploidy level |
has close match | |
has related match | |
examples |
exact match: Plant chromosome number [TOP241] (https://top-thesaurus.org/index) exact match: Species genotype: chromosome ploidy [TRY:222] (https://www.try-db.org/de/de.php) exact match: Chromosome_number [GIFT:5.1.1] (https://gift.uni-goettingen.de) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030081 |
Age of reproductive maturity
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030210 |
alternative label | reproductive_maturity |
description |
The age [NCIT:C25150] of a plant when it is capable of sexual reproduction [GO:0000003], which is the time interval (duration) [PATO:0001309] between seed germination [GO:0009845] and when a plant is able to produce mature [PATO:0001701] seed [PO:0009010]. The age of a plant when they are able to set seed, indicating it is reproductively mature. |
comments |
Although reproductive maturity should be marked by the ability to set viable seed, this trait will often be scored as when plants first produce flowers, as this is easier to score. This trait is only meant to capture primary reproductive maturity, not secondary reproductive maturity following a disturbance. See a series of traits starting with fire_time_from_fire_to_flowering and fire_time_from_fire_to_fruiting for measures of secondary reproductive maturity.
|
value type | continuous variable |
unit |
a year |
minAllowedValue | 0.1 |
maxAllowedValue | 1000 |
has broader | plant phenological trait |
plant structure | whole plant |
measured characteristic |
age duration organismal quality |
keyword |
reproduction flowering stage maturity |
scope note | |
has exact match | days to maturity |
has close match | |
has related match | |
examples |
exact match: whole plant primary juvenile period length [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Age at maturity of saplings [BROT:42] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030210 |
Diaspore dispersal syndrome
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030211 |
alternative label | dispersal_syndrome |
description |
A classification [NCIT:C25161] based on a taxon’s [NCIT:C40098] seed morphology traits [TO:0000184] or fruit morphology traits [TO:0002629] that indicates the taxa (biotic vectors) or abiotic mechanisms [NCIT:C25343] that most likely disperse [OMIT: 0027297] seeds [PO:0009010] and fruit [PO:0009001] away from the parent plant. Plant dispersal syndromes are generally assigned to species based on suites of diaspore characteristics associated with specific mechanisms of dispersal. Trait values are mostly given as the formal dispersal syndromes ending in ‘chory’, a suffix meaning ‘a specified method of plant dispersal’. |
comments | |
value type | categorical variable |
has narrower |
dispersal_syndrome_anemochory Diaspore is dispersed by wind. (Synonyms, wind) dispersal_syndrome_anthrochory Diaspore is dispersed by humans, either intentionally or unintentionally. dispersal_syndrome_atelochory Diaspore dispersal is prevented. (Synonyms, antitelochory) dispersal_syndrome_autochory Diaspore is dispersed by methods originating from the parent plant or diaspore. dispersal_syndrome_ballistic Seeds are launched away from the plant by explosion as soon as the seed capsule opens. dispersal_syndrome_barochory Diaspores are dispersed without assistance. (Synonyms, gravity, mobile, unassisted, passive) dispersal_syndrome_chamaechory Diaspore is dispersed by being rolled along ground surface by wind. dispersal_syndrome_endozoochory Diaspore is ingested by animals, either intentionally or accidentally, then transported before being deposited. (Synonyms, ingestion) dispersal_syndrome_epizoochory Diaspore is dispersed by accidentally attaching itself to the outside of an animal vector. (Synonyms, ectozoochory, exozoochory) dispersal_syndrome_hydrochory Diaspore is dispersed on the surface of water. (Synonyms, water) dispersal_syndrome_myrmecochory Diaspores have elaiosomes (specialised nutritious appendages) that make them attractive for capture, transport and use by ants or related insects. dispersal_syndrome_undefined Dispersal mechanism unknown. (Synonyms, unknown) dispersal_syndrome_zoochory Diaspore is dispersed by animals, by an undescribed mechanism. |
has broader |
interspecific interactions trait seed morphology trait fruit morphology trait |
plant structure plant structure plant structure |
reproductive shoot system seed fruit |
measured characteristic |
organismal quality mechanism shape |
keyword |
mutualism biological process involved in symbiotic interaction, symbiosis seed dispersal appendage symbiosis |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Plant dispersal syndrome [TOP346] (https://top-thesaurus.org/index) exact match: Dispersal syndrome [TRY:28] (https://www.try-db.org/de/de.php) exact match: Dispersal syndrome [GIFT:3.3] (https://gift.uni-goettingen.de) exact match: whole plant dispersal syndrome [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) exact match: Dispersal mode [BROT:23] (http://doi.org/10.1038/sdata.2018.135) |
references |
Pérez-Harguindeguy 2013 Saatkamp 2018 Wigley 2020 LEDA Data Standards 2005 Kew Seed Information Database 2022 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030211 |
Diaspore dispersal agents
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030212 |
alternative label | dispersers |
description |
The taxa [NCIT:C40098] (biotic vectors) and abiotic mechanisms [NCIT:C25343] that disperse [OMIT: 0027297] seeds [PO:0009010] and fruit [PO:0009001] away from a parent plant. Dominant diaspore dispersal agents, including both biotic agents (specific taxa) or abiotic mechanisms responsible for dispersing seeds (or other dispersal units) away from the parent plant. |
comments | Allowable terms for biotic dispersal agents include taxa at both the species-level and much broader groupings, reflecting both the different levels of resolution provided by researchers and whether a plant has specific versus broad dispersal agents. Abiotic dispersal mechanisms can likewise be quite general or specific, depending on data availability. |
value type | categorical variable |
has narrower |
dispersers_indigenous_people Indigenous people disperse the fruit through traditional practices. dispersers_abiotic Fruits are dispersed by unspecified abiotic mechanisms. dispersers_ants Ants are an important fruit dispersal agent. dispersers_animals Animals are an important fruit dispersal agent. dispersers_bats Bats are an important fruit dispersal agent. dispersers_birds Birds are an important fruit dispersal agent. dispersers_cassowaries Cassowaries, in contrast to smaller flying birds, are an important fruit dispersal agent. dispersers_fish Fish are an important fruit dispersal agent. dispersers_floods Floods are an important fruit dispersal agent. dispersers_flying_vertebrates Flying birds and bats are important fruit dispersal agents. dispersers_flying_foxes Flying foxes are an important fruit dispersal agent. dispersers_garden_refuse Fruit are dispersed through garden refuse. dispersers_insects Insects are an important fruit dispersal agent. dispersers_invertebrates Invertebrates are an important fruit dispersal agent. dispersers_mammals Mammals are an important fruit dispersal agent. dispersers_mammals_domestic Domesticated ammals are an important fruit dispersal agent. dispersers_non-flying_vertebrates Mammals and non-flying birds (i.e. cassowary, emu) are important fruit dispersal agents. dispersers_passive There is no special dispersal agent. dispersers_rain Rain is an important fruit dispersal agent; the diaspore is propelled by action of rain on plant structure or the wetting of the plant structure by rain or dew. dispersers_rodents Rodents are an important fruit dispersal agent. dispersers_vehicles Vehicles are an important dispersal agent, such as through mud on tyres. dispersers_vertebrates Vertebrates are an important fruit dispersal agent. dispersers_wind Wind is an important fruit dispersal agent. dispersers_water Water is an important fruit dispersal agent. dispersers_water_currents Water currents are an important fruit dispersal agent; the diaspore may be either floating or submerged in fresh/saltwater currents. |
has broader | interspecific interactions trait |
plant structure plant structure plant structure |
reproductive shoot system seed fruit |
measured characteristic |
organismal quality mechanism |
keyword |
mutualism biological process involved in symbiotic interaction, symbiosis seed dispersal symbiosis |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
close match: Plant dispersal syndrome [TOP346] (https://top-thesaurus.org/index) close match: Dispersal syndrome [TRY:28] (https://www.try-db.org/de/de.php) |
references |
Pérez-Harguindeguy 2013 Saatkamp 2018 Wigley 2020 LEDA Data Standards 2005 Kew Seed Information Database 2022 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030212 |
Environmental flowering cues
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030213 |
alternative label | flowering_cues |
description |
Unpredictable, irregular environmental conditions [ENVO_01000203] that are linked to a plant [PO:0000003] producing flowers [PO:0009046]. A plants’ flowering response to unpredictable, irregular environmental cues. |
comments |
Taxa may be scored as having an environmental flowering cue, but also display a season-specific flowering response which is captured in the trait flowering_time . For additional details on a plant’s post-fire flowering response see also the trait post_fire_flowering .
|
value type | categorical variable |
has narrower |
flowering_cues_rain Plants increase flowering in response to rain, but the time of year is not specified. flowering_cues_rain_obligate Plants only flower following rain events. flowering_cues_rain_all_year Plants increase flowering in response to rain at any time of the year. flowering_cues_rain_summer Plants increase flowering in response to summer rains. flowering_cues_rain_autumn Plants increase flowering in response to autumn rains. flowering_cues_rain_winter Plants increase flowering in response to winter rains. flowering_cues_rain_spring Plants increase flowering in response to spring rains. flowering_cues_floods Plants increase flowering in response to floods. flowering_cues_fire Plants increase flowering in response to fires. |
has broader |
plant phenological trait environmental tolerance trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
time duration |
keyword |
whole plant flowering stage flowering time trait environmental condition disturbance (event fire |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 19/05/2023 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030213 |
Flowering time, by month
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030214 |
alternative label | flowering_time |
description |
The months [UO:0000035] during which a plant [PO:0000003] has open (anthetic) flowers [PO:0009046] and is therefore at the whole plant flowering stage [PO:0007016]. Months during which taxon has open (anthetic) flowers. |
comments | Trait keyed as a sequences of 12 Ns (not flowering) and Ys (flowering), representing the 12 months, starting with January. |
value type | categorical variable |
has broader | plant phenological trait |
plant structure plant structure |
reproductive shoot system flower |
measured characteristic |
time duration temporal pattern |
keyword |
whole plant flowering stage flowering time trait |
scope note | |
has exact match | |
has close match | flowering time |
has related match | whole plant flowering stage |
examples |
related match: Plant flowering begin trait [TOP292] (https://top-thesaurus.org/index) related match: Plant flowering end trait [TOP293] (https://top-thesaurus.org/index) exact match: Flower onset of flowering (first flowering date, flowering beginning) [TRY:2956] (https://www.try-db.org/de/de.php) exact match: Flowering time [GIFT:3.7] (https://gift.uni-goettingen.de) exact match: plant flowering duration [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) close match: plant flowering begin [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references |
Saatkamp 2018 Stephens 2022 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030214 |
Fruiting time, by month
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030215 |
alternative label | fruiting_time |
description |
The months [UO:0000035] during which a plant [PO:0000003] produces fruit [PO:0009001] with mature [PATO:0001701] seeds [PO:0009010]. Months during which taxon produces fruit with mature seeds. |
comments | Trait keyed as a sequences of 12 Ns (not fruiting) and Ys (fruiting), representing the 12 months, starting with January. |
value type | categorical variable |
has broader | plant phenological trait |
plant structure plant structure |
reproductive shoot system fruit |
measured characteristic |
time duration temporal pattern |
keyword | whole plant fruit development stage |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Fruiting time [GIFT:3.8] (https://gift.uni-goettingen.de) exact match: plant fruiting duration [BIEN] (https://bien.nceas.ucsb.edu/bien/biendata) |
references | Saatkamp 2018 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030215 |
Seedling recruitment time, by month
Seedling establishment conditions
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030217 |
alternative label | seedling_establishment_conditions |
description |
The environmental conditions [ENVO:01000203] under which a taxon [NCIT:C40098] displays seed [PO:0009010] germination [GO:0009845] and seedling establishment [EnvThes:20410], with trait values reflecting successional changes to the vegetation community. The environmental conditions under which a taxon’s seedlings can establish, with trait values reflecting successional changes to the vegetation community. |
comments | The selection of trait values does not distinguish between the ability to establish in intermediate age versus mature vegetation, as this level of detail is rarely provided in datasets. |
value type | categorical variable |
has narrower |
seedling_establishment_conditions_establish_post_fire Seedling establishment occurs following fire. seedling_establishment_conditions_establish_post_disturbance Seedling establishment occurs following disturbances that increase light levels at the ground surface, but the type of disturbance is not documented. seedling_establishment_conditions_establish_anytime Seedlings can establish immediately following a disturbance and in later years as vegetation ages, right thru to mature and over-mature vegetation seedling_establishment_conditions_establish_intermediate_to_mature_vegetation Seedlings require some environmental characteristics not found in vegetation straight after fires to establish, for they cannot establish within the first season or two after fire but can establish in older vegetation (including mature to over-mature vegetation). |
has broader |
plant phenological trait environmental tolerance trait fire response trait |
plant structure plant structure |
whole plant seed |
measured characteristic |
time organismal quality |
keyword |
seed germination recruitment seedling seedling establishment reproduction environmental condition |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | related match: Seedling establishment [TRY:3620] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 19/05/2023 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030217 |
Canopy light environment required for reproduction
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030218 |
alternative label | reproductive_light_environment_index |
description |
A plant phenological [TO:0000933] life history [ECOCORE:00000018] trait which is an index [NCIT:C25390] that captures the level of photosynthetically active radiation [ENVO:01001864] required by plants for reproduction [GO:0000003]. The minimum light environment required by plants for reproduction, scaled from 0 to 8. |
comments |
0 indicates No direct light, extremely low levels of transmitted/reflected light, such as beneath dense fern or palm fronds close to ground level. ; 0.5 indicates No direct light, very low levels of transmitted light ; 1 indicates Rare or no exposure to direct light from lateral sources, and low levels of transmitted light. ; 2 indicates Low lateral light and low-moderate transmitted light with <10% of inverted cone exposed to lateral sources of direct light, plus low to moderate levels of transmitted light ; 3 indicates Low-moderate lateral & moderate transmitted light, with <5% exposure of the focal crown to vertical direct light, and <15 % of inverted cone exposed to lateral sources of direct light, plus moderate transmitted light. ; 4 indicates Moderate lateral light & moderate-high transmitted light, with 5 - 10% exposure of focal crown to direct vertical light, plus 2-20% exposure of inverted cone to lateral sources of direct light, plus moderate to high levels of transmitted light. ; 5 indicates Moderate vertical light and moderate-high lateral light, with 5 - 20% exposure of focal crown to direct vertical light, plus one or both of, i. 10-40% exposure of 90-degree inverted cone to lateral sources of direct light, ii. exposure to high levels of transmitted light ; 6 indicates Moderate-High vertical and high lateral light, with 10-30% of vertical projection of the crown exposed to vertical light, and lateral light exposure for > 40% of 90-degree inverted cone , 7 indicates High vertical and lateral light, with 30-80% of vertical projection of the crown exposed to vertical light, or exposure to lateral sources of direct light for > 60 % of a 90-degree inverted cone encompassing the focal crown. ; 8 indicates Full light exposure of crown, with > 80% of the vertical projection of the crown exposed to vertical light. .
|
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 0 |
maxAllowedValue | 8 |
has broader | plant phenological trait |
plant structure | whole plant |
measured characteristic |
response to tolerance sensitivity |
keyword |
photosynthetically active radiation reproduction environmental condition recruitment radiation |
scope note | |
has exact match | |
has close match | |
has related match | shade tolerance |
examples | related match: Species light requirement [TRY:788] (https://www.try-db.org/de/de.php) |
references | Wells 2012 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030218 |
Canopy light environment required for seedling establishment
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030219 |
alternative label | establishment_light_environment_index |
description |
A plant phenological [TO:0000933] life history [ECOCORE:00000018] trait which is an index [NCIT:C25390] that captures the level of photosynthetically active radiation [ENVO:01001864] required by plants for seed germination [GO:0009845] and seedling establishment [EnvThes:20410]. The minimum light environment required by seedlings for establishment, scaled from 0 to 8. |
comments |
0 indicates No direct light, extremely low levels of transmitted/reflected light, such as beneath dense fern or palm fronds close to ground level. ; 0.5 indicates No direct light, very low levels of transmitted light ; 1 indicates Rare or no exposure to direct light from lateral sources, and low levels of transmitted light. ; 2 indicates Low lateral light and low-moderate transmitted light with <10% of inverted cone exposed to lateral sources of direct light, plus low to moderate levels of transmitted light ; 3 indicates Low-moderate lateral & moderate transmitted light, with <5% exposure of the focal crown to vertical direct light, and <15 % of inverted cone exposed to lateral sources of direct light, plus moderate transmitted light. ; 4 indicates Moderate lateral light & moderate-high transmitted light, with 5 - 10% exposure of focal crown to direct vertical light, plus 2-20% exposure of inverted cone to lateral sources of direct light, plus moderate to high levels of transmitted light. ; 5 indicates Moderate vertical light and moderate-high lateral light, with 5 - 20% exposure of focal crown to direct vertical light, plus one or both of, i. 10-40% exposure of 90-degree inverted cone to lateral sources of direct light, ii. exposure to high levels of transmitted light ; 6 indicates Moderate-High vertical and high lateral light, with 10-30% of vertical projection of the crown exposed to vertical light, and lateral light exposure for > 40% of 90-degree inverted cone , 7 indicates High vertical and lateral light, with 30-80% of vertical projection of the crown exposed to vertical light, or exposure to lateral sources of direct light for > 60 % of a 90-degree inverted cone encompassing the focal crown. ; 8 indicates Full light exposure of crown, with > 80% of the vertical projection of the crown exposed to vertical light. .
|
value type | continuous variable |
unit | {dimensionless} |
minAllowedValue | 0 |
maxAllowedValue | 8 |
has broader | plant phenological trait |
plant structure | whole plant |
measured characteristic |
response to tolerance sensitivity |
keyword |
photosynthetically active radiation reproduction environmental condition seed germination seedling establishment recruitment radiation |
scope note | |
has exact match | |
has close match | |
has related match | shade tolerance |
examples | related match: Species light requirement [TRY:788] (https://www.try-db.org/de/de.php) |
references | Wells 2012 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030219 |
Seed storage location
Serotiny
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030412 |
alternative label | serotiny |
description |
A fire response trait which indicates whether a fruit [PO:0009001] or cone [strobilus; PO:0025083] remains closed in the canopy [ENVO:01001242] after maturation [TO:0002661], with the seed [PO:0009010] only being released [NCIT:C42882] after a specific [NCIT:C38024] environmental conditions [ENVO:01000203], usually an environmental cue associated with a fire [ENVO:01000786], but possibly also drought or extreme heat. Categorical variable describing whether a fruit or cone remains closed in the plant canopy after maturation until an environmental cue, usually a fire, but possibly also drought or extreme heat, triggers it to release its seeds. |
comments | |
value type | categorical variable |
has narrower |
serotiny_not_serotinous Plant does not display serotiny. serotiny_serotinous Plant serotinous, level not specified. serotiny_serotiny_low Plant displays a weak level of serotiny, indicating it releases most of its seeds gradually, with only a small proportion of the seeds retained as a canopy seedbank until an environmental cue triggers the release of the entire seedbank. serotiny_serotiny_moderate Plant displays a moderate level of serotiny, indicating it releases some of its seeds gradually, with the remainder retained as a canopy seedbank until an environmental cue triggers the release of the entire seedbank. serotiny_serotiny_high Plant displays a strong level of serotiny, indicating all seeds are retained as a canopy seedbank until an environmental cue triggers their release. |
has broader |
fire response trait reproductive structure life history trait |
plant structure plant structure plant structure |
reproductive shoot system seed fruit |
measured characteristic |
organismal quality requirement response to |
keyword |
seed maturation environmental condition fire reproduction canopy seed bank seed viability seed dormancy |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
close match: Seedbank type [TRY:159] (https://www.try-db.org/de/de.php) exact match: Serotiny level [BROT:39] (http://doi.org/10.1038/sdata.2018.135) |
references | Lamont 2020 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030412 |
Seedbank longevity class
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030413 |
alternative label | seedbank_longevity_class |
description |
A seedbank’s [MESH:D000068098] longevity [EnvThes:22228], expressed as a categorical variable [STATO:0000252], where seedbank longevity is the time interval (duration [PATO:0001309]) a mature [PATO:0001701] seed [PO:0009010] remains in the seedbank, viable [PATO_0000169] and able to germinate [GO:0009845]. Categorical groupings indicating the length of time (duration) a mature seed remains in the seedbank, viable and able to germinate. |
comments |
Seedbank longevity classes are a feature of a population (sample) of seeds, not an individual seed. Also see the traits seedbank_longevity (numeric trait), seed_dormancy_class and the trait seed_recruitment_timing .
|
value type | categorical variable |
has narrower |
seedbank_longevity_class_transient Seed that survives in the seedbank until its first annual germination season, but not until its second annual germination season. Some transient seeds will germinate within weeks to months, while others may remain in the seedbank for slightly over a year, depending on how the annual recruitment season aligns with seed maturation. Transient seeds are non-dormant, remaining in the seedbank until environmental conditions are appropriate for germination. seedbank_longevity_class_persistent Seed that survives in the seedbank until at least its second germination season. seedbank_longevity_class_short_persistent Seed that persists in the seedbank for approximately 1 to 5 years, although the time interval varies by study. seedbank_longevity_class_long_persistent Seed that persists in the seedbank for more than 5 years, although the time interval varies by study. seedbank_longevity_class_widely_dispersed Seed longevity not important, as seeds are widely dispersed and always available for germination. |
has broader |
fire response trait reproductive structure life history trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
time duration |
keyword |
seed germination seed bank reproduction seed longevity survival seed dormancy |
scope note | |
has exact match | seed longevity time |
has close match | seed longevity |
has related match | |
examples |
close match: Canopy seed bank longevity [BROT:38] (http://doi.org/10.1038/sdata.2018.135) close match: Soil seed bank longevity [BROT:40] (http://doi.org/10.1038/sdata.2018.135) |
references |
Walck 2005 Thompson & Ooi 2010 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | seed_longevity_categorical |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030413 |
Seedbank longevity
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030414 |
alternative label | seedbank_longevity |
description |
The half-life of the seedbank [MESH:D000068098], with is the time interval (duration [PATO:0001309]) from when seeds [PO:0009010] in a seedbank mature [PATO:0001701] until more than half the seeds in a seedbank are no longer able to germinate [GO:0009845]. The half-life of the seedbank, which is the length of time (duration) from when seeds in a seedbank mature until more than half the seeds in a seedbank are no longer able to germinate. |
comments |
Seedbank longevity can only be measured on a population (sample) of seeds, not on an individual seed. Also see the traits seedbank_longevity_class , seed_dormancy_class and seed_recruitment_timing .
|
value type | continuous variable |
unit |
a year |
minAllowedValue | 0.01 |
maxAllowedValue | 1000 |
has broader |
fire response trait reproductive structure life history trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
time duration |
keyword |
seed germination seed bank reproduction seed longevity survival seed dormancy |
scope note | |
has exact match |
seed longevity time seed longevity |
has close match | |
has related match | |
examples |
close match: Canopy seed bank longevity [BROT:38] (http://doi.org/10.1038/sdata.2018.135) close match: Soil seed bank longevity [BROT:40] (http://doi.org/10.1038/sdata.2018.135) |
references | Thompson & Ooi 2010 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | seed_longevity_numeric |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030414 |
Dormancy type
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030415 |
alternative label | seed_dormancy_class |
description |
Physical [PATO:0002079], physiological [NCIT:C16990], and morphological [PATO:0000051] mechanisms [NCIT:C25343] that inhibit mature [PATO:0001701] seeds [PO:0009010] from germinating [GO:0009845]. Mechanisms that inhibit mature seeds from germinating and the environmental or experimental cues that allow a seed to break dormancy and germinate. |
comments | |
value type | categorical variable |
has narrower |
seed_dormancy_class_morphophysiological_dormancy Seeds exhibit morphophysiological dormancy, with both morphological and physiological dormancy mechanisms that must be overcome. seed_dormancy_class_morphological_dormancy Seeds exhibit morphological dormancy, generally because an underdeveloped embryo needs to grow. seed_dormancy_class_non_dormant Seeds are non-dormant. seed_dormancy_class_physical_dormancy Seeds exhibit physical dormancy, due to one or more water-impermeable layers in the seed coat. seed_dormancy_class_physiological_dormancy Seeds exhibit physiological dormancy, whereby chemical changes are required within the seed to break dormancy, including temperature stratification and after-ripening. |
has broader | reproductive structure life history trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
organismal quality requirement mechanism response to |
keyword |
seed germination environmental condition experimental condition seed dormancy reproduction recruitment |
scope note | |
has exact match | |
has close match | |
has related match | seed dormancy |
examples |
close match: Chemical germination cues [BROT:35] (http://doi.org/10.1038/sdata.2018.135) close match: Heat-stimulated germination [BROT:36] (http://doi.org/10.1038/sdata.2018.135) close match: Other germination cues [BROT:37] (http://doi.org/10.1038/sdata.2018.135) |
references |
Baskin & Baskin 2004 Thompson & Ooi 2010 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | dormancy_type |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030415 |
Seed germination treatment
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030416 |
alternative label | seed_germination_treatment |
description |
The treatment [EFO:0000727] or experimental conditions [XCO:0000000] required for a high [NCIT:C25227] proportion [PATO:0001470] of seeds [PO:0009010] to germinate [GO:0009845] . Treatment required for seed to display high germination rates. The data included in AusTraits are mostly from seed banks that have recorded the protocols they use to encourage seeds to germinate. The treatments may therefore be only loosely connected to the cues required for a species’ to break dormancy. |
comments | |
value type | categorical variable |
has narrower |
seed_germination_treatment_after_ripening Seed germinates more readily after a period of warm, dry storage. seed_germination_treatment_chemical_treatment Seed germinates more readily after a chemical treatment. seed_germination_treatment_cold Seed germinates more readily after cold treatment. seed_germination_treatment_dark Seed germinates more readily after being stored in the dark. seed_germination_treatment_heat Seed germinates more readily after being heated. seed_germination_treatment_heat_lethal Seed is heat sensitive. (A fire response, more than a treatment to break dormancy.) seed_germination_treatment_heat+smoke Seed germinates more readily after a treatment that merges heat and smoke. seed_germination_treatment_imbibe_hot Seed germinates more readily after being soaked in hot water; water temperature usually between 70 deg C to just below boiling. seed_germination_treatment_leaching Seed germinates more readily after leaching out certain chemicals. seed_germination_treatment_light Seed germinates more readily after light exposure. seed_germination_treatment_mycorrhizae Seed germinates more readily if infected by a mycorrhizal symbiont. seed_germination_treatment_none No treatment required for seed to display high germination rates. seed_germination_treatment_rain Seed germinates more readily after rain. seed_germination_treatment_scarify Seed coat is removed, nicked, or otherwise punctured to increase germination. seed_germination_treatment_smoke Seed germinates more readily after being subjected to a smoke treatment; includes smoked water. seed_germination_treatment_stratification Seed germinates more readily after being stored in moist conditions; not specified if the treatment was cold stratification or warm stratification .seed_germination_treatment_stratification_cold Seed germinates more readily after a period of cold, wet storage. seed_germination_treatment_stratification_warm Seed germinates more readily after a period of warm, wet storage. |
has broader | reproductive structure life history trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic |
organismal quality tolerance sensitivity requirement response to |
keyword |
reproduction experimental condition seed dormancy seed germination recruitment |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Seed germination stimulation [TRY:34] (https://www.try-db.org/de/de.php) close match: Chemical germination cues [BROT:35] (http://doi.org/10.1038/sdata.2018.135) close match: Heat-stimulated germination [BROT:36] (http://doi.org/10.1038/sdata.2018.135) close match: Other germination cues [BROT:37] (http://doi.org/10.1038/sdata.2018.135) |
references |
Merritt 2007 Jiménez-Alfaro 2016 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 30/11/2021 |
reviewed by |
Elizabeth Wenk Hervé Sauquet Russell Barrett Carl Gosper Lydia Guja Gregory J. Jordan Mark Ooi Karen D. Sommerville Lily Dun |
change note | germination_treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030416 |
Seed germination proportion
Seed viability
Seed germination time
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030419 |
alternative label | seed_germination_time |
description |
The time interval (duration) [PATO:0001309] from when a seed [PO:0009010] is exposed to suitable [NCIT:C116358] environmental conditions [ENVO:01000203] or experimental conditions [XCO:0000000] for germinating [GO:0009845] until it germinates. The time interval from when a seed is exposed to suitable conditions for germinating until it germinates. |
comments | |
value type | continuous variable |
unit |
d day |
minAllowedValue | 0 |
maxAllowedValue | 1000 |
has broader | reproductive structure life history trait |
plant structure plant structure |
reproductive shoot system seed |
measured characteristic | duration |
keyword |
seed germination environmental condition experimental condition seed bank recruitment |
scope note | |
has exact match | days to germinate |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 10/06/2023 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030419 |
Vegetative reproduction ability
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030510 |
alternative label | vegetative_reproduction_ability |
description |
A whole plant [PO:0000003] life history [ECOCORE:00000018] trait which is the ability [NCIT:C78209] of individual [EFO:0000542] plants to reproduce [GO:0000003] through asexual reproduction [GO:0019954] (vegetative reproduction). A binary trait, indicating whether a plant taxon is able to reproduce and spread through the growth and division of vegetative material. |
comments |
For plants able to reproduce vegetatively, more detailed information about the mechanisms and structures that allow clonal spread is provided in the trait clonal_spread_mechanism . The trait dispersal_unit captures information on plants that never produce by seed.
|
value type | categorical variable |
has narrower |
vegetative_reproduction_ability_not_vegetative Plant taxa that regenerate and spread only by seed. vegetative_reproduction_ability_vegetative Plant taxa that can regenerate and spread through the growth and division of vegetative material, not just from seed; examples include runners, rhizomes, and bulbs. vegetative_reproduction_ability_vegetative_obligate Plant taxa that never (or very rarely) regenerate from seed, instead regenerating and spreading entirely through the growth and division of vegetative material. |
has broader | whole plant phenotype trait |
plant structure | whole plant |
measured characteristic | organismal quality |
keyword |
reproduction asexual reproduction survival vegetative growth clonal growth |
scope note | |
has exact match |
Ability to vegetative propagation clonal reproduction |
has close match | vegetative growth |
has related match | |
examples |
exact match: Plant reproduction type [TOP123] (https://top-thesaurus.org/index) exact match: Plant vegetative regeneration capacity [TRY:344] (https://www.try-db.org/de/de.php) exact match: Reproduction_asexual_1 [GIFT:3.5.1] (https://gift.uni-goettingen.de) close match: Clonality [BROT:15] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | vegetative_regeneration |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030510 |
Clonal spread mechanism
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030511 |
alternative label | clonal_spread_mechanism |
description |
A plant structure morphology trait [TO:0000839] which is the mechanism [NCIT:C25343] plants use for clonal growth [EnvThes:21032] (asexual reproduction [GO:0019954]) or for regeneration [GO:0031099] after a disturbance event [EnvThes:20373] Mechanisms and structures (tissues, organs, or other structures) a plant uses to spread vegetatively, including the production of clones. |
comments |
See vegetative_reproduction_ability for a binary description of whether a plant can spread vegetatively. There are two other traits with overlapping trait values, but that are distinct trait concepts: storage_organ indicates the plant structures where a plant stores excess carbohydrates; these organs may or may not facilitate clonal spread; bud_bank_location indicates the location of meristematic tissue (buds) that allow regeneration following a disturbance or after an annual unfavourable season.
|
value type | categorical variable |
has narrower |
clonal_spread_mechanism_aboveground_clonal Vegetative buds or plant fragments that can disperse and produce new plants (including axillary buds, bulbils and turions). clonal_spread_mechanism_adventitious_roots Adventitious roots can form at nodes on the main roots or aboveground from nodes on stems. clonal_spread_mechanism_bulb Below ground storage organ derived from stem (and sometimes leaf) tissue, that divides into new individuals. clonal_spread_mechanism_belowground_clonal Plants use an unspecified underground organ for clonal spread. clonal_spread_mechanism_corm Below ground organ derived from stem tissue that can function either for vegetative spread or to regenerate following a disturbance. clonal_spread_mechanism_rhizome Plant has an underground stem that has stem buds and forms adventitious roots at nodes; this stem may be woody or non-woody. Rhizomes are both a mechanism for vegetative spread and a strategy to survive fire. clonal_spread_mechanism_root_buds Root buds that produce vertical suckers. clonal_spread_mechanism_root_tuber A swollen root that functions as a storage organ and has buds that allow clonal growth. clonal_spread_mechanism_stem_tuber A swollen underground stem that functions as a storage organ and has buds that allow clonal growth. clonal_spread_mechanism_stolon Plants having horizontal branches (stems) from the base of the plant that produce new plants from buds at its tip or nodes. clonal_spread_mechanism_viviparous Plant produces clonal offspring that grow while still attached to the parent plant. clonal_spread_mechanism_non_clonal Plant does not display clonal growth. |
has broader |
life history trait plant structure morphology trait |
plant structure plant structure plant structure plant structure |
whole plant bud root stem |
measured characteristic |
organismal quality mechanism structure |
keyword |
clonal growth asexual reproduction regeneration survival plant organ reproduction vegetative growth |
scope note | |
has exact match | clonal reproduction |
has close match | |
has related match | clonal growth |
examples |
exact match: Plant vegetative reproduction: clonal growth organ [TRY:356] (https://www.try-db.org/de/de.php) exact match: Reproduction_asexual_2 [GIFT:3.5.2] (https://gift.uni-goettingen.de) exact match: Clonality [BROT:15] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030511 |
Storage organ
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030512 |
alternative label | storage_organ |
description |
A plant structure morphology trait [TO:0000839] which is the type [NCIT:C25284] of storage organ [EFO:0000997] a plant has, where a storage organ is a plant part (organ [PO:0009008], tissue [PO:0009007], or other plant structure [PO:0009011]) whose function [NCIT:C25518] is carbohydrate [CHEBI:16646] (energy [PATO:0001021]) storage. Plant structures (tissues, organs, or other structures) where a plant stores excess carbohydrates (energy). The stored energy may be used for future growth, including clonal spread and regrowth following an annual unfavourable season, or for regrowth following a disturbance event (including post-fire regeneration or another disturbance event that causes leaf loss). Trait values include both generic terms and quite specific ones to accommodate the variation in detail provided across datasets. |
comments |
There are two other traits with overlapping trait values, but that are distinct trait concepts: clonal_spread_mechanism indicates mechanisms and structures a plant actually uses for vegetative spread; not all energy storage organs also allow vegetative spread; bud_bank_location indicates the location of meristematic tissue (buds) that allow regeneration following a disturbance or after an annual unfavourable season. See Pausus, Lamont et al. 2018 (doi.org/10.1111/nph.14982) for detailed descriptions of recolonization ability and level of fire protection provided by each regeneration strategy.
|
value type | categorical variable |
has narrower |
storage_organ_bulb Below ground storage organ derived from stem and usually leaf tissue. storage_organ_corm Below ground storage organ that is a short, rounded, vertical, fleshy, underground stem. storage_organ_caudex Swollen stem that usually functions in water storage, although the term can also apply to below ground structures or to swollen roots. storage_organ_fleshy_underground_organ Plants that use fleshy, generally underground organs (swellings) to regenerate, but the type of organ is not specified; examples include corms, tubers, bulbs, and caudex. storage_organ_lignotuber Swollen woody structures are located at the transition between the stem base and root crown of woody shrubs, mallees and small trees, and are formed from stem tissues. Buds are located over the entire structure. No colonisation ability. storage_organ_pseudobulb An above ground storage organ present in many terrestrial and epiphytic orchids created throough the thickening of the stem between leaf nodes. storage_organ_rhizome A type of continually growing or creeping underground stem, but it is not specified if the rhizome is woody or non-woody. storage_organ_rhizome_woody A type of continually growing or creeping woody underground stem. storage_organ_rhizome_fleshy A type of continually growing or creeping fleshy, non-woody underground stem. storage_organ_rhizome_fibrous A type of continually growing or creeping fibrous, non-woody underground stem. storage_organ_root_tuber A swollen root the stores nutrients, carbohydrates and water. (Synonym, taproot tuber) storage_organ_stem_tuber A swollen underground stem that stores nutrients, carbohydrates and water. storage_organ_storage_organ Plant has a storage organ, but the type is unknown. storage_organ_tuber A swollen underground organ that stores nutrients, carbohydrates and water, where it is not specified if the tuber develops from root or stem tissue. storage_organ_no_storage_organ No storage organ present |
has broader |
life history trait plant structure morphology trait |
plant structure plant structure plant structure |
whole plant root stem |
measured characteristic |
structure function |
keyword |
storage organ plant organ carbohydrate energy Plant resprout survival |
scope note | |
has exact match | storage organ |
has close match | |
has related match | |
examples | exact match: Plant storage organ [TOP166] (https://top-thesaurus.org/index) |
references |
Pausus, Lamont et al. 2018 Wigley 2020 Tavşanoğlu & Pausas 2018 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030512 |
Bud bank location
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030513 |
alternative label | bud_bank_location |
description |
The position [PATO:0000140] and distribution [PATO:0000060] of vegetative meristematic tissue [PO:0006079] (buds [PO:0000055]) on a plant [PO:0000003]. These may be buds that allow a plant to regrow following an unfavourable season or buds that survive [EnvThes:21064] a disturbance event [EnvThes:20373] such as a fire, cyclone or drought. In particular, they may be meristematic tissue that survives a fire [ENVO:01000786] and allows the plant to resprout [Cerrado:fire#PlantResprout] following the fire. The location of buds (meristematic tissue) on a plant that allows it to resprout following a fire, annual unfavourable season, or other disturbance event, such as a drought or cyclone. Trait values include both generic terms and quite specific ones to accommodate the variation in detail provided across datasets. |
comments |
There are two other traits with overlapping trait values, but that are distinct trait concepts: clonal_spread_mechanism indicates mechanisms and structures a plant actually uses for vegetative spread; not all energy storage organs also allow vegetative spread; storage_organ indicates the plant structures where a plant stores excess carbohydrates. See Pausus, Lamont et al. 2018 (doi.org/10.1111/nph.14982) for detailed descriptions of recolonization ability and level of fire protection provided by each regeneration strategy. If specific bud banks only survive some types of disturbance, the disturbance should be specified as a context property.
|
value type | categorical variable |
has narrower |
bud_bank_location_apical_buds Plants resprout from above-ground apical meristems. Also termed a caudex. Term refers to palm-like plants with aerial buds that resprout, including grass trees, palms, tree ferns, and pandanus. (Synonym, aerial apical sprouter) bud_bank_location_basal_buds Plants resprout from its base, with buds originating from stem tissue (e.g. lignotuber) and root tissue (root crown) not distinguished between. Most buds designated as being basal are likely to be resprouts from a lignotuber, but this trait value is used if the dataset reported basal buds rather than basal stem buds or lignotuber .bud_bank_location_basal_stem_buds Plants resprout from the base of the stem. Australian plants with basal stem buds usually have a lignotuber, documented in the trait storage_organ . (Synonym, rootstock, lignotuberous resprouter)bud_bank_location_epicormic_buds Plants resprout from the stem or trunk. bud_bank_location_fleshy_underground_organ Plants resprouts from buds on a fleshy underground organ that is a taproot tuber, bulb, corm, stem tuber, root tuber, or belowground caudex. (Synonym, geophyte) bud_bank_location_root_crown Plants resprout from the root crown, the root tissue at the root-stem transition. bud_bank_location_bud-bearing_root Root buds produce vertical suckers (from root crown) or adventitious roots. (Synonyms, root-suckering resprouter, adventitious buds) bud_bank_location_rhizome Plants resprout from buds on a rhizome, where it is not specified if the rhizome is woody or non-woody. bud_bank_location_rhizome_woody Plants resprout from buds on a woody rhizome. bud_bank_location_rhizome_non_woody Plants resprout from buds on a fleshy rhizome, rhizophore, or fibrous rhizome. bud_bank_location_stem_buds Plants resprout from stem buds; this trait value is separate to epicormic buds. (Synonyms, aerial axillary resprouter) bud_bank_location_stem_tuber Plants resprout from buds on a stem tuber. bud_bank_location_stolon Horizontal branches (stems) resprout from the base of the plant. bud_bank_location_underground_buds Plants that resprout from underground organ, but the type of organ isn’t specified. bud_bank_location_none Plants lack regenerative buds. |
has broader | whole plant phenotype trait |
plant structure plant structure |
whole plant bud |
measured characteristic |
position spatial pattern, distribution location |
keyword |
shoot system meristem survival disturbance (event fire Plant resprout regeneration |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Bud source [BROT:30] (http://doi.org/10.1038/sdata.2018.135) |
references |
Pausus, Lamont et al. 2018 Wigley 2020 Tavşanoğlu & Pausas 2018 Clarke 2013 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030513 |
Sprout depth
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030514 |
alternative label | sprout_depth |
description |
The depth [PATO:0001595] below the ground [SWEET:realmSoil/Ground] surface or height [PATO:0000119] above the ground surface of vegetative meristematic tissue [PO:0006079] (buds [PO:0000055]) that resprouts [Cerrado:fire#PlantResprout] following a fire [ENVO:01000786]. Depth below the soil surface (positive number) or height above ground (negative number) from which buds (meristematic tissue) resprout following a disturbance, such as a fire. |
comments | |
value type | continuous variable |
unit |
mm millimetre |
minAllowedValue | -100 |
maxAllowedValue | 100 |
has broader | fire response trait |
plant structure plant structure |
whole plant bud |
measured characteristic |
depth height |
keyword |
shoot system meristem fire Plant resprout ground soil regeneration |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Budbank height distribution [TRY:153] (https://www.try-db.org/de/de.php) |
references | Vesk & Yen 2019 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030514 |
Post-fire resprouting capacity
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030610 |
alternative label | resprouting_capacity |
description |
A fire response trait which indicates whether mature [PATO:0001701] plants [PO:0000003] from a taxon [NCIT:C40098] or population [PCO:0000001] are killed or have vegetative meristematic tissue [PO:0006079] (buds [PO:0000055]) that resprout [Cerrado:fire#PlantResprout] following a fire [ENVO:01000786] that causes 100% leaf scorch, with fire severity index [EnvThes:22120] an important contextual variable. Trait indicating whether mature individuals of a taxon are killed, resprout, or have a mixed survival response when exposed to fire that causes 100% leaf scorch. Species where at least 70% of plants resprout are designated resprouters , while those where fewer than 30% of plants resprout are designated as fire killed . Species with an intermediate response have a mixed fire response, and are coded as fire_killed resprouts .
|
comments |
This trait is narrowly applicable only to taxa that experience fire; see the trait fire_exposure_level for trait values related to species whose strategy is to avoid fire.
|
value type | categorical variable |
has narrower |
resprouting_capacity_fire_killed Fewer than 30% of plants resprout following a fire with 100% leaf scorch. (Synonym, fire-sensitive) resprouting_capacity_resprouts More than 70% of plants resprout following a fire with 100% leaf scorch. resprouting_capacity_partial_resprouting Between 30-70% of plants resprout following a fire with 100% leaf scorch. |
has broader | fire response trait |
plant structure plant structure |
whole plant bud |
measured characteristic |
response to tolerance sensitivity |
keyword |
disturbance (event fire Plant resprout habitat disturbance regeneration shoot system meristem survival |
scope note | applicable to plants that experience fire |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Species tolerance to fire [TRY:318] (https://www.try-db.org/de/de.php) exact match: Plant resprouting capacity [TRY:819] (https://www.try-db.org/de/de.php) exact match: Resprouting capacity after fire [BROT:34] (http://doi.org/10.1038/sdata.2018.135) |
references |
Gill & Bradstock 1992 Clarke 2015 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | fire_response |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030610 |
Post-fire proportion resprouting individuals
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030611 |
alternative label | resprouting_capacity_proportion_individuals |
description |
A fire response trait which is the proportion [PATO:0001470] of mature [PATO:0001701] individuals [EFO:0000542] in a population [PCO:0000001] that have vegetative meristematic tissue [PO:0006079] (buds [PO:0000055]) that resprouts [Cerrado:fire#PlantResprout] following a fire [ENVO:01000786]. Proportion of mature individuals in a population that survive a fire and resprout following a fire. |
comments | |
value type | continuous variable |
unit | {count}/{count} |
minAllowedValue | 0 |
maxAllowedValue | 1 |
has broader | fire response trait |
plant structure plant structure |
whole plant bud |
measured characteristic |
dimensionless ratio ratio; proportion count tolerance sensitivity response to |
keyword |
disturbance (event fire Plant resprout habitat disturbance regeneration shoot system meristem survival |
scope note | applicable to plants that experience fire |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Species tolerance to fire [TRY:318] (https://www.try-db.org/de/de.php) exact match: Plant resprouting capacity [TRY:819] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | fire_response_numeric |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030611 |
Post-fire resprouting capacity of juvenile plants
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030612 |
alternative label | resprouting_capacity_juvenile |
description |
A fire response trait which indicates whether juvenile [PATO:0001190] plants [PO:0000003] from a taxon [NCIT:C40098] or population [PCO:0000001] are killed or have vegetative meristematic tissue [PO:0006079] (buds [PO:0000055]) that resprouts [Cerrado:fire#PlantResprout] following a fire [ENVO:01000786] with 100% leaf scorch. Trait indicating whether juvenile phase individuals of a taxon are killed, resprout, or have a mixed survival response when exposed to a fire with 100% leaf scorch. |
comments | |
value type | categorical variable |
has narrower |
resprouting_capacity_juvenile_juvenile_fire_killed Few to no juvenile plants resprout following fire with 100% leaf scorch. resprouting_capacity_juvenile_juvenile_resprout More than 50% of juvenile plants survive and resprout following fire with 100% leaf scorch. resprouting_capacity_juvenile_juvenile_moderate_fire_killed 25-50% of juvenile plants resprout following fire with 100% leaf scorch. |
has broader | fire response trait |
plant structure plant structure |
whole plant bud |
measured characteristic |
response to tolerance sensitivity tolerance |
keyword |
disturbance (event fire Plant resprout habitat disturbance regeneration shoot system meristem survival juvenile |
scope note | applicable to plants that experience fire |
has exact match | |
has close match | |
has related match | |
examples |
close match: Species tolerance to fire [TRY:318] (https://www.try-db.org/de/de.php) close match: Plant resprouting capacity [TRY:819] (https://www.try-db.org/de/de.php) |
references |
Noble & Slatyer 1980 Noble & Gitay 1996 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | fire_response_juvenile |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030612 |
Time from seedling germination until individuals survive a fire
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030613 |
alternative label | resprouting_capacity_time_from_germination |
description |
A fire response trait which is the time interval (duration) [PATO:0001309] from seed germination [GO:0009845] until individuals [EFO:0000542] are able to survive [EnvThes:21064] and resprout [PlantResprout] following a fire where 100% of the leaves [PO:0025034] in the canopy [ENVO:01001242] are scorched. A fire response trait which is the time from seed germination until individuals are able to survive and resprout following a fire where 100% of the leaves in the canopy are scorched. |
comments | An essential context property to map for this trait is the population survival metric. For instance, is this trait scored based on the youngest individual to survive a fire or the age at which 50% of individuals survive and resprout following a fire. |
value type | continuous variable |
unit |
a year |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | fire response trait |
plant structure | whole plant |
measured characteristic |
age organismal quality |
keyword |
disturbance (event fire Plant resprout habitat disturbance regeneration survival |
scope note | applicable to plants that resprout following fire at some life stages |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 19/05/2023 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030613 |
Post-fire to pre-fire stem ratio
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030614 |
alternative label | resprouting_capacity_stem_ratio |
description |
A fire response trait which is the ratio [PATO:0001470] of the count [NCIT:C25463] of stems [PO:0009047] per individual [EFO:0000542] following a fire [ENVO:01000786] to the count of stems per individual before the fire, recorded for taxa that have multiple stems emerging from the ground [SWEET:realmSoil/Ground]. Ratio of stem count post-fire to basal stem count (e.g. grass tillers) pre-fire at an individual or population level. This trait is appropriate to score for plants that have many stems from the base (shrubs, herbs, graminoids) where the number of stems is censused both before and after the fire. It is a continuous measure of resprouting strength conditioned on initial size. |
comments | This trait will usually be recorded in natural or experimental systems subjected to a controlled burn, where stem counts can be censused both before and after a fire. However, it is appropriate to include data for any plants subjected to fire where the dead stems can still be counted post-fire. |
value type | continuous variable |
unit | {count}/{count} |
minAllowedValue | 0 |
maxAllowedValue | 10 |
has broader | fire response trait |
plant structure plant structure |
whole plant stem |
measured characteristic |
dimensionless ratio ratio; proportion response to tolerance sensitivity |
keyword |
fire Plant resprout disturbance (event survival regeneration |
scope note | applicable to plants that experience fire |
has exact match | |
has close match | |
has related match | |
examples | |
references | Moore 2019 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | fire_response_stem_ratio |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030614 |
Plant vegetative response to disturbances other than fire
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030615 |
alternative label | resprouting_capacity_non_fire_disturbance |
description |
A whole plant [PO:0000003] life history [ECOCORE:00000018] trait which is the ability [NCIT:C78209] of individual [EFO:0000542] plants to regenerate [GO:0031099] vegetatively (resprout [Cerrado:fire#PlantResprout]) from meristematic tissue [PO:0006079], buds [PO:0000055]) after a disturbance event [EnvThes:20373] other than a fire [ENVO:01000786] that causes 100% defoliation. A plant’s ability to regenerate vegetatively (resprout) from a disturbance other than fire that causes 100% defoliation. |
comments |
This trait explicitly refers to a plant’s vegetative regeneration ability following a disturbance event other than fire. See other resprouting_capacity traits, bud_bank_location , and clonal_spread_mechanism for other information about a plant’s ability to resprout. Just as post-fire resprouting capacity is documented in individuals that have suffered 100% leaf scorch, this trait should be scored only on individuals that have suffered 100% leaf loss. If a different leaf loss percentage is used, this needs to be documented as a context property.
|
value type | categorical variable |
has narrower |
resprouting_capacity_non_fire_disturbance_resprouts_non_fire_disturbance Plants that are known to be fire-killed, but have the ability to resprout following a disturbance other than fire that causes 100% leaf loss. resprouting_capacity_non_fire_disturbance_resprouts_after_cyclone Plants are able to resprout following 100% leaf loss in a cyclone. resprouting_capacity_non_fire_disturbance_resprouts_after_drought Plants are able to resprout following 100% leaf loss during a drought. |
has broader | life history trait |
plant structure | whole plant |
measured characteristic |
organismal quality ability tolerance sensitivity |
keyword |
regeneration shoot system meristem disturbance (event Plant resprout habitat disturbance environmental condition survival |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Resprouting capacity after disturbances [BROT:33] (http://doi.org/10.1038/sdata.2018.135) close match: Resprouting capacity after clipping [BROT:32] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | regeneration_non_fire_disturbance |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030615 |
Fire exposure level
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030651 |
alternative label | fire_exposure_level |
description |
A fire response trait indicating small-scale variation in plant [PO:0000003] habitat [ENVO:01000739] or growing season that protects the plant’s shoot systems [PO:0009006] or root system [PO:0025025] from exposure [NCIT:C17941] to fire [ENVO:01000786] or being damaged (scorched) by fire, when a fire occurs nearby. Trait indicating habitat (or microhabitat) variation that protects the shoot or root system of some taxa from being exposed to fire and scorched by the fire, even when a fire burns nearby. |
comments | |
value type | categorical variable |
has narrower |
fire_exposure_level_aquatic_taxon Plants rarely or never experience fires because they are aquatic. fire_exposure_level_fire_avoidance_among_rocks Plants rarely experience fires because their habitat is restricted to rocky outcrops or rock pavement. fire_exposure_level_fire_avoidance_near_water Plants rarely or never experience fires because their habitat is close to a body of water. fire_exposure_level_fire_avoidance_in_swamp Plants rarely experience fires because their habitat is usually saturated, but populations can be catastrophically impacted during severe droughts when the swamps dry out. fire_exposure_level_seasonal_fire_avoidance Plants avoid fire by only have above-ground parts during seasons when fire is rare or absent, but populations can be catastrophically impacted if fire occurs during an atypical season. |
has broader | fire response trait |
plant structure | whole plant |
measured characteristic |
response to exposure avoidance |
keyword |
shoot system fire habitat disturbance survival disturbance (event |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030651 |
Post-fire recruitment
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030652 |
alternative label | post_fire_recruitment |
description |
A fire response trait which is the magnitude [NCIT:C49158] of seed [PO:0009010] germination [GO:0009845] and seedling establishment [EnvThes:20410] after a fire [ENVO:01000786]. A trait indicating the magnitude of seed germination and seedling establishment following a fire. |
comments | This trait does not suggest what mechanism(s) is triggering post-fire recruitment, but only that a post-fire response is (or is not) observed. There are several fire-related context properties that should be documented whenever possible, including fire severity (most important), fire season, and fire frequency. In addition, the time from fire to recruitment will vary greatly across systems, and, when available, a basic habitat description should be documented as a location property. |
value type | categorical variable |
has narrower |
post_fire_recruitment_post_fire_recruitment Plants that germinate post-fire. post_fire_recruitment_post_fire_recruitment_absent Plants that do not show increased seeding following fire. |
has broader | fire response trait |
plant structure plant structure |
whole plant seed |
measured characteristic |
response to sensitivity requirement sensitivity sensitivity response to |
keyword |
seed germination seedling establishment fire habitat disturbance recruitment environmental condition disturbance (event |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
exact match: Post-fire seedling emergence [BROT:43] (http://doi.org/10.1038/sdata.2018.135) related match: Post-fire seedling survival [BROT:44] (http://doi.org/10.1038/sdata.2018.135) |
references |
Pyke 2017 Noble & Slatyer 1980 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | fire_and_establishing |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030652 |
Post-fire flowering
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030653 |
alternative label | post_fire_flowering |
description |
A fire response trait which is a taxon’s [NCIT:C40098] flowering [PO:0007016] response [NCIT:C25755] to fire [ENVO:01000786], indicating if the magnitude [NCIT_C49158] of flowers [PO:0009046] increases, decreases or remains unchanged following a fire. Indication of whether the magnitude of flowers produced by a taxon increases, decreases or remains unchanged following a fire. |
comments | This trait does not suggest what mechanism(s) is triggering post-fire flowering, but only that a post-fire response is (or is not) observed. There are several fire-related context properties that should be documented whenever possible, including fire severity (most important), fire season, and fire frequency. In addition, the time from fire to flowering will vary greatly across systems, and, when available, a basic habitat description should be documented as a location property. |
value type | categorical variable |
has narrower |
post_fire_flowering_fire_dependent_flowering Plants predominantly flower after a fire, usually within the first 1-4 growing seasons following the fire. post_fire_flowering_fire_enhanced_flowering Flowering is enhanced after a fire, with plants flowering more prolifically for the first 1-4 growing seasons following the fire. post_fire_flowering_fire_independent_flowering Flowering is independent of fire, with the magnitude of flowers produced by plants unchanged following a fire. post_fire_flowering_fire_suppressed_flowering Flowering is suppressed or absent after a fire, with plants producing fewer flowers for at least the first 1-4 growing seasons following the fire. |
has broader |
fire response trait plant phenological trait |
plant structure plant structure |
whole plant flower |
measured characteristic |
requirement response to sensitivity |
keyword |
whole plant flowering stage flowering time trait fire habitat disturbance environmental condition |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Fire-stimulated flowering [BROT:31] (http://doi.org/10.1038/sdata.2018.135) |
references |
Pyke 2017 Noble & Slatyer 1980 |
date created | 23/02/2023 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030653 |
Time from fire to first flowering
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030654 |
alternative label | fire_time_from_fire_to_flowering |
description |
A fire response trait which is the time interval (duration) [PATO:0001309] after a fire [ENVO:01000786] until one individual [EFO:0000542] of a taxon [NCIT:C40098] in a population [PCO:0000001] reaches whole plant flowering stage [PO_0007016]. The time interval from a fire until the first individual in a population begins flowering. |
comments | This trait can include data that documents the time from a fire until either a resprouter or a fire-killed species first begins flowering, as both have important regeneration and conservation implications. Whenever available, a context property should be added to indicate if data are scoring the time from seed germination or post-fire resprouting to the onset of flowering. |
value type | continuous variable |
unit |
mo month |
minAllowedValue | 1 |
maxAllowedValue | 1000 |
has broader |
fire response trait plant phenological trait reproductive structure life history trait |
plant structure plant structure plant structure |
reproductive shoot system flower whole plant |
measured characteristic |
time duration organismal quality age |
keyword |
fire whole plant flowering stage habitat disturbance regeneration disturbance (event maturity Plant resprout reproduction |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Age at maturity of resprouts [BROT:41] (http://doi.org/10.1038/sdata.2018.135) |
references | Noble & Slatyer 1980 |
date created | 16/02/2023 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030654 |
Time from fire until 50% of individuals are flowering
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030655 |
alternative label | fire_time_from_fire_to_50_percent_flowering |
description |
A fire response trait which is the time interval (duration) [PATO:0001309] after a fire [ENVO:01000786] until a 50% of the individuals [EFO:0000542] of a taxon [NCIT:C40098] in a population [PCO:0000001] reaches whole plant flowering stage [PO_0007016]. The time interval from a fire until 50% of the individuals in a population produce flowers. |
comments | This trait can include data that documents the time from a fire until either a resprouter or a fire-killed species first begins flowering, as both have important regeneration and conservation implications. Whenever available, a context property should be added to indicate if data are scoring the time from seed germination or post-fire resprouting to the onset of flowering. |
value type | continuous variable |
unit |
mo month |
minAllowedValue | 1 |
maxAllowedValue | 500 |
has broader |
fire response trait plant phenological trait reproductive structure life history trait |
plant structure plant structure plant structure |
reproductive shoot system flower whole plant |
measured characteristic |
time duration organismal quality age |
keyword |
fire whole plant flowering stage habitat disturbance regeneration disturbance (event maturity Plant resprout reproduction |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Age at maturity of resprouts [BROT:41] (http://doi.org/10.1038/sdata.2018.135) |
references |
Gosper 2013 Noble & Slatyer 1980 Bradstock & Kenny 2003 |
date created | 17/05/2023 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030655 |
Time from fire to peak flowering
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030656 |
alternative label | fire_time_from_fire_to_peak_flowering |
description |
A fire response trait which is the time interval (duration) [PATO:0001309] after a fire [ENVO:01000786] until the individuals [EFO:0000542] of a taxon [NCIT:C40098] in a population [PCO:0000001] reach maximum flowering [PO_0007016] levels. The time interval from a fire until the individuals in a population display maximum flowering. |
comments | This trait can include data that documents the time from a fire until either a resprouter or a fire-killed species first begins flowering, as both have important regeneration and conservation implications. Whenever available, a context property should be added to indicate if data are scoring the time from seed germination or post-fire resprouting to the onset of flowering. |
value type | continuous variable |
unit |
mo month |
minAllowedValue | 1 |
maxAllowedValue | 1000 |
has broader |
fire response trait plant phenological trait reproductive structure life history trait |
plant structure plant structure plant structure |
reproductive shoot system flower whole plant |
measured characteristic |
time duration organismal quality age |
keyword |
fire whole plant flowering stage habitat disturbance regeneration disturbance (event maturity Plant resprout reproduction |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Age at maturity of resprouts [BROT:41] (http://doi.org/10.1038/sdata.2018.135) |
references | no linked references |
date created | 17/05/2023 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030656 |
Time from fire until flowering declines
Time from fire to fruiting
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030658 |
alternative label | fire_time_from_fire_to_fruiting |
description |
A fire response trait which is the time interval (duration) [PATO:0001309] after a fire [ENVO:01000786] until one individual [EFO:0000542] of a taxon [NCIT:C40098] in a population [PCO:0000001] produces mature [PATO:0001701] fruit [PO:0009001]. The time interval from a fire until the first individual in a population produces a mature fruit with viable propagules. |
comments | This trait can include data that documents the time from a fire until either a resprouter or a fire-killed species first begins producing mature fruit, as both have important regeneration and conservation implications. Whenever available, a context property should be added to indicate if data are scoring the time from seed germination or post-fire resprouting to the onset of fruiting. |
value type | continuous variable |
unit |
mo month |
minAllowedValue | 1 |
maxAllowedValue | 500 |
has broader |
fire response trait whole plant phenotype trait reproductive structure life history trait |
plant structure plant structure plant structure |
reproductive shoot system fruit whole plant |
measured characteristic |
time duration organismal quality age |
keyword |
fire whole plant fruit development stage habitat disturbance regeneration disturbance (event maturity Plant resprout reproduction |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Age at maturity of resprouts [BROT:41] (http://doi.org/10.1038/sdata.2018.135) |
references |
Gosper 2013 Noble & Slatyer 1980 Bradstock & Kenny 2003 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | time_from_fire_to_fruit |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030658 |
Time from fire until 50% of individuals are fruiting
Fuel bed bulk density
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030710 |
alternative label | fire_fuel_bed_bulk_density |
description |
Fuel bed bulk density (volume density [PATO:0001353]), which is the ratio [PATO:0001470] of the mass [PATO:0000125] of the fuel bed divided by the fuel bed volume [PATO:0000918]; the term fuel bed refers to the accumulated plant litter [ENVO:01000628] on the ground [SWEET:realmSoil/Ground], as this is the fuel [CHEBI:33292] that is burnt in a ground fire [ENVO:01000786].The density of the fuel bed, the plant litter accumulated on the ground. It is calculated as the ratio of the mass of the fuel bed to the fuel bed volume. This trait should be measured on plant litter from a single taxon. |
comments | In wildland environments it will be difficult to measure this trait on an individual taxon and fuel bed will instead be a ‘community level’ trait. Therefore, this trait will generally be used to document fuel bed bulk density in experimental situations. |
value type | continuous variable |
unit |
g/cm3 gram per cubic centimetre |
minAllowedValue | 0.001 |
maxAllowedValue | 1 |
has broader | fire response trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
mass mass fraction ratio; proportion volume density mass density, density |
keyword |
plant litter fuel fire ground experimental condition |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | Grootemaat 2017 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030710 |
Fuel consumption by fire
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030711 |
alternative label | fire_fuel_consumption |
description |
For a given taxon [NCIT:C40098], the proportion [PATO:0001470] of plant biomass [ENVO:01000155] (fuel [CHEBI:33292]) that is consumed by a fire [ENVO:01000786]. Proportion of available plant biomass (live and dead) that is consumed by fire. This trait should be measured on biomass from a single taxon. |
comments | In wildland environments it will be difficult to measure this trait on an individual taxon; it will instead be a ‘community level’ trait. Therefore, this trait will generally be used to document fuel consumption in experimental situations. |
value type | continuous variable |
unit |
g/g gram per gram |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | fire response trait |
plant structure plant structure |
whole plant leaf |
measured characteristic |
mass mass fraction ratio; proportion dimensionless ratio |
keyword |
fuel fire combustion ash combustion process |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030711 |
Fire rate of spread
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030712 |
alternative label | fire_rate_of_spread |
description |
For a given taxon [NCIT:C40098], the horizontal [PATO:0001855] speed [PATO:0000008] of fire [ENVO:01000786] movement [NCIT:C37994]. The horizontal rate of fire spread. |
comments | In wildland environments it will be difficult to measure this trait on an individual taxon; it will instead be a ‘community level’ trait. Therefore, this trait will generally be used to document rates of fire spread in experimental situations. |
value type | continuous variable |
unit |
cm/s centimetre per second |
minAllowedValue | 0.01 |
maxAllowedValue | 1 |
has broader | fire response trait |
plant structure | whole plant |
measured characteristic |
movement speed rate ratio; proportion |
keyword |
habitat disturbance fuel fire combustion combustion process |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030712 |
Leaf smoulder duration
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030713 |
alternative label | fire_smoulder_duration |
description |
A fire response trait which is the duration [PATO:0001309] of the portion of fire [ENVO:01000786]-induced combustion [NCIT:C157201] process from the time when a flame [ENVO:01000789] is no longer visible until smoulder combustion ends. Smoulder duration for a single leaf, which is the time from the end of the last visible flame until the glowing phase dies out. |
comments | In wildland environments it will be difficult to measure this trait on an individual taxon; it will instead be a ‘community level’ trait. Therefore, this trait will generally be used to document rates of fire spread in experimental situations. |
value type | continuous variable |
unit |
s second |
minAllowedValue | 0.1 |
maxAllowedValue | 1000 |
has broader | fire response trait |
plant structure | leaf |
measured characteristic |
time duration time interval |
keyword |
fire flame combustion smoulder combustion combustion process |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030713 |
Leaf flame duration
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030714 |
alternative label | fire_flame_duration |
description |
A fire response trait which is the duration [PATO:0001309] of the portion of fire [ENVO:01000786]-induced combustion [NCIT:C157201] process from the start of combustion until a flame [ENVO:01000789] is no longer visible. Flame duration for a single leaf, which is the time from the first visible flame until the last visible flame. |
comments | In wildland environments it will be difficult to measure this trait on an individual taxon; it will instead be a ‘community level’ trait. Therefore, this trait will generally be used to document rates of fire spread in experimental situations. |
value type | continuous variable |
unit |
s second |
minAllowedValue | 0.1 |
maxAllowedValue | 200 |
has broader | fire response trait |
plant structure | leaf |
measured characteristic |
time duration time interval |
keyword |
fire flame combustion combustion process |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030714 |
Leaf flame and smoulder duration
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030715 |
alternative label | fire_total_burn_duration |
description |
A fire response trait which is the duration [PATO:0001309] of the entire fire [ENVO:01000786]-induced combustion [NCIT:C157201] process from the time of the start of combustion until smoulder combustion [APD:glossary/40094] ends. For a single leaf, the sum of flame duration and smoulder duration, which is the time from the first visible flame until the glowing phase dies out. |
comments | In wildland environments it will be difficult to measure this trait on an individual taxon; it will instead be a ‘community level’ trait. Therefore, this trait will generally be used to document rates of fire spread in experimental situations. |
value type | continuous variable |
unit |
s second |
minAllowedValue | 0.1 |
maxAllowedValue | 1500 |
has broader | fire response trait |
plant structure | leaf |
measured characteristic |
time duration time interval |
keyword |
fire combustion flame smoulder combustion combustion process |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030715 |
Fire time to ignition
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030716 |
alternative label | fire_time_to_ignition |
description |
A fire response trait which is the time interval (duration) [PATO:0001309] from a leaf’s [PO:0025034] exposure [NCIT:C17941] to a flame [ENVO:01000789] until the leaf ignites [APD:glossary/40040]. For a single leaf, the time from an ignition source contacting the leaf until ignition occurs. |
comments | In wildland environments it will be difficult to measure this trait on an individual taxon; it will instead be a ‘community level’ trait. Therefore, this trait will generally be used to document rates of fire spread in experimental situations. |
value type | continuous variable |
unit |
s second |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader | fire response trait |
plant structure | leaf |
measured characteristic |
time duration time interval |
keyword |
flame fire ignition survival combustion process |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030716 |
Plant resource requirements and tolerance
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030810 |
alternative label | plant_type_by_resource_use |
description |
An environmental [ENVO:01000203] tolerance [NCIT:C43414] trait which categorises plants based on the environmental conditions in which they survive and thrive, including their tolerance of, sensitivity [NCIT:C25201] to, and requirement [NCIT:C25652] for certain resource availabilities [EnvThes:21497], including water [CHEBI:15377] availability and soil [ENVO:00001998] nutrient [CHEBI:33284] content and salinity [PATO:0085001]. Classification scheme of plant resource requirements and tolerances, categorising taxa based on their water, soil nutrient, and soil salinity requirements and tolerances. |
comments | |
value type | categorical variable |
has narrower |
plant_type_by_resource_use_hydrohalophyte Tidal swamp or ‘mangrove’ and coastal lagoon elements and temperate-zone salt-marsh taxa are classed together. plant_type_by_resource_use_phreatophyte Deep-rooted plants<U+2014>usually trees<U+2014>obtaining water from a deep underground source that may or may not be saline. plant_type_by_resource_use_psammophile Sand-loving plants commonly found in littoral strand or inland sandfields. plant_type_by_resource_use_weedy This inexact term is meant to indicate a high degree of adaptability to sites, and proven tendency toward aggressive colonization of either dry or wet sites, or rarely, both. In general, weeds invade and colonize highly disturbed sites or areas. plant_type_by_resource_use_xerohalophyte Plants adapted to inland salt desert and saline habitats. plant_type_by_resource_use_xerophyte Drought-tolerant and drought-adapted plants. |
has broader | environmental tolerance trait |
plant structure | whole plant |
measured characteristic |
resistance to tolerance requirement sensitivity |
keyword |
environmental condition resource availability water soil nutrient salinity |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
close match: Species tolerance to salt [TRY:1254] (https://www.try-db.org/de/de.php) close match: Species tolerance to drought [TRY:30] (https://www.try-db.org/de/de.php) |
references | Santos 2016 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | plant_type_by_resource_use |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030810 |
Plant flood regime response
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030811 |
alternative label | plant_flood_regime_classification |
description |
An environmental [ENVO:01000203] tolerance [NCIT:C43414] trait which categorises plants based on the depth [PATO:0001595], duration [PATO:0001309] and frequency [PATO:0000044] of inundation [SWEET:phenSystem/Inundation] a plant [PO:0000003] is able to tolerate. It incorporates their ability to tolerate or respond to fluctuations in flooding [ENVO:01000710] and drying, including growth [GO:0040007] and seed germination [GO:0009845] responses. Classification scheme of plant flood regime requirements and tolerances, categorising taxa into seven groups based on their germination and growth responses to flood regimes. |
comments | |
value type | categorical variable |
has narrower |
plant_flood_regime_classification_terrestrial_dry Species which germinate, grow and reproduce where there is no surface water and the water table is below the soil surface. (Dry species; Tdr) plant_flood_regime_classification_terrestrial_damp Species which germinate, grow and reproduce on saturated soil. (Damp species; Tda) plant_flood_regime_classification_amphibious_fluctuation_tolerators_emergent Species which germinate in damp or flooded conditions, which tolerate variation in water level, and which grow with their basal portions under water and reproduce out of water. (Emergent species; ATe) plant_flood_regime_classification_amphibious_fluctuation_tolerators_low Species which germinate in damp or flooded conditions, which tolerate variation in water level, which are low-growing and tolerate complete submersion when water-levels rise. (Low-growing species; ATl) plant_flood_regime_classification_amphibious_fluctuation_responders_plastic Species which germinate in flooded conditions, grow in both flooded and damp conditions, reproduce above the surface of the water, and which have morphological plasticity (e.g. heterophylly) in response to water-level variation. (Morphologically plastic species; ARp) plant_flood_regime_classification_amphibious_fluctuation_responders_floating Species which germinate in flooded conditions, grow in both flooded and damp conditions, reproduce above the surface of the water, and which have floating leaves when inundated. (Species with floating leaves; ARf) plant_flood_regime_classification_amphibious Species which germinate in damp or flooded conditions and can grow in or our of water. plant_flood_regime_classification_submerged Species which germinate, grow and reproduce underwater. (S |
has broader | environmental tolerance trait |
plant structure | whole plant |
measured characteristic |
resistance to tolerance sensitivity requirement duration |
keyword |
environmental condition flood growth seed germination inundation soil water content resource availability water survival |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Ellenberg moisture value [TOP779] (https://top-thesaurus.org/index) |
references |
Brock & Casanova 1997 Casanova & Brock 2000 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | flood_regime_classification |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030811 |
Plant water-logging tolerance
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030812 |
alternative label | plant_tolerance_water_logged_soils |
description |
An environmental [ENVO:01000203] tolerance [NCIT:C43414] trait which is the duration [PATO:0001309] that a plant [PO:0000003] is able to tolerate water-logged soils, an indication of a plant’s sensitivity [NCIT:C25201] to flood [ENVO:01000710] conditions. Soil [ENVO:00001998] is considered water-logged if it is saturated [NCIT:C61427] with water [CHEBI:15377], limiting the plant root’s [PO:0009005] ability to respire [GO:0045333] due to a lack of soil oxygen [CHEBI:15379]. Categorical groupings, indicating the length of time a taxon is able to tolerate water-logged soils. |
comments | |
value type | categorical variable |
has narrower |
plant_tolerance_water_logged_soils_not_applicable Taxa is not typically confronted with waterlogging and its response is unknown. plant_tolerance_water_logged_soils_less_than_1_month Taxa able to tolerate less than 1 month of waterlogging. plant_tolerance_water_logged_soils_1-6_months Taxa able to tolerate 1-6 months of waterlogging. plant_tolerance_water_logged_soils_greater_than_6_months Taxa able to tolerate more than 6 months of waterlogging. plant_tolerance_water_logged_soils_aquatic Taxa truly aquatic and able to be permanently inundated. |
has broader | environmental tolerance trait |
plant structure plant structure |
whole plant root |
measured characteristic |
resistance to tolerance sensitivity duration |
keyword |
environmental condition flood soil saturated soil water content inundation water survival |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | water_logging_tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030812 |
Plant inundation tolerance
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030813 |
alternative label | plant_tolerance_inundation |
description |
An environmental [ENVO:01000203] tolerance [NCIT:C43414] trait which is the duration [PATO:0001309] that a plant [PO:0000003] is able to tolerate inundation [SWEET:phenSystem/Inundation], an indication of a plant’s sensitivity [NCIT:C25201] to flood [ENVO:01000710] conditions. Categorical groupings, indicating the length of time a taxon is able to tolerate being under water. |
comments | |
value type | categorical variable |
has narrower |
plant_tolerance_inundation_not_applicable Taxa is not typically confronted with being inundated and its response is unknown. plant_tolerance_inundation_less_than_1_month Taxa able to tolerate being inundated for less than 1 month. plant_tolerance_inundation_1-6_months Taxa able to tolerate being inundated for 1-6 months. plant_tolerance_inundation_greater_than_6_months Taxa able to tolerate being inundated for more than 6 months. plant_tolerance_inundation_aquatic Taxa truly aquatic and able to be permanently inundated. |
has broader | environmental tolerance trait |
plant structure | whole plant |
measured characteristic |
resistance to tolerance sensitivity duration |
keyword |
environmental condition flood inundation water saturated survival |
scope note | |
has exact match | submergence tolerance |
has close match | submergence sensitivity |
has related match | |
examples |
close match: Ellenberg moisture value [TOP779] (https://top-thesaurus.org/index) exact match: Species tolerance to waterlogging [TRY:61] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | inundation_tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030813 |
Plant snow tolerance
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030814 |
alternative label | plant_tolerance_snow |
description |
An environmental [ENVO:01000203] tolerance [NCIT:C43414] trait which is the duration [PATO:0001309] that a plant [PO:0000003] is able to tolerate being covered by snow [ENVO:01000406]. Categorical groupings, indicating the length of time a taxon is able to tolerate being under snow cover. |
comments | |
value type | categorical variable |
has narrower |
plant_tolerance_snow_not_applicable Taxa is virtually never confronted with snow in nature and the response is unknown. plant_tolerance_snow_intolerant Taxa is frost tender and known to be killed by any snow. plant_tolerance_snow_days Taxa can tolerate being covered by snow for days (typically less than 1 week). plant_tolerance_snow_weeks Taxa can tolerate being covered by snow for weeks (typically less than 1 month). plant_tolerance_snow_months Taxa can tolerate being covered by snow for months. |
has broader | environmental tolerance trait |
plant structure | whole plant |
measured characteristic |
resistance to tolerance sensitivity duration |
keyword |
environmental condition snow survival |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | close match: Frost tolerance [TOP768] (https://top-thesaurus.org/index) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | snow_tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030814 |
Plant soil salinity tolerance
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030815 |
alternative label | plant_tolerance_soil_salinity |
description |
An environmental [ENVO:01000203] tolerance [NCIT:C43414] trait which is the maximum [NCIT:C25564] soil [ENVO:00001998] salinity [PATO:0085001], reported as soil conductivity [PATO:0001585], that a plant is able to tolerate. Maximum salinity tolerated by a taxon, reported as the conductivity of the soil. |
comments | |
value type | continuous variable |
unit |
dS/m decisiemens per metre |
minAllowedValue | 0.1 |
maxAllowedValue | 100 |
has broader |
chemical stress sensitivity trait environmental tolerance trait |
plant structure | whole plant |
measured characteristic |
conductivity tolerance sensitivity |
keyword |
environmental condition soil salinity salt resource availability salt tolerance survival |
scope note | |
has exact match | |
has close match | |
has related match | |
examples |
related match: Ellenberg salt value [TOP200] (https://top-thesaurus.org/index) exact match: Species tolerance to salt [TRY:1254] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | soil_salinity_tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030815 |
Plant salt tolerance strategy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030816 |
alternative label | plant_tolerance_salt |
description |
An environmental [ENVO:01000203] tolerance [NCIT:C43414] trait which categorises plants based on their salinity [PATO:0085001] tolerance [TO:0006001], reflecting the duration [PATO:0001309] and concentration [PATO:0000033] of salt [CHEBI:24866] exposure that a plant is able to tolerate. Classification scheme of plant salt-tolerance categories, categorising taxa based on their tolerance of or sensitivity to salty soils, salt spray, or salt water. |
comments |
The trait soil_salinity_tolerance documents actual soil salinity levels taxa can tolerate. The trait plant_type_by_resource_use has some overlapping values, but focuses on terms to describe a plant’s overall resource tolerances/requirements, while this trait focuses on terms associated with salinity tolerances/requirements. The trait plant_tolerance_soil_salinity offers numeric soil salinity levels a taxon can tolerate.
|
value type | categorical variable |
has narrower |
plant_tolerance_salt_glycophyte Plants that cannot survive even one tenth the salt concentration found in seawater. plant_tolerance_salt_halophyte Plants that complete their life cycle in a salty environment; many survive in seawater or even higher concentrations of salt. plant_tolerance_salt_halophyte_moderate Plant that is moderately tolerant of soil salinity/sodicity. plant_tolerance_salt_hydrohalophyte Tidal swamp or ‘mangrove’ and coastal lagoon elements and temperate-zone salt-marsh taxa are classed together. plant_tolerance_salt_salt_spray_tolerant Plant that is tolerant of salt spray (typically inhabiting near-coastal environments). plant_tolerance_salt_salinity_tolerance_undefined Plant’s ability to tolerate salt is unknown. plant_tolerance_salt_xerohalophyte Plants adapted to inland salt desert and saline habitats. |
has broader |
chemical stress sensitivity trait environmental tolerance trait |
plant structure | whole plant |
measured characteristic |
resistance to tolerance sensitivity duration |
keyword |
environmental condition soil salinity salt resource availability salt tolerance survival |
scope note | |
has exact match | |
has close match | salt sensitivity |
has related match | |
examples |
related match: Ellenberg salt value [TOP200] (https://top-thesaurus.org/index) exact match: Species tolerance to salt [TRY:1254] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | salt_tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030816 |
Plant calcium sensitivity
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030817 |
alternative label | plant_tolerance_calcicole |
description |
An environmental [ENVO:01000203] tolerance [NCIT:C43414] trait which is a plant’s [PO:0000003] calcium sensitivity [TO:0000006], corresponding to its sensitivity [NCIT:C25201] to high soil [ENVO:00001998] pH [NCIT:C45997]. Classification scheme of plant soil calcium tolerance, corresponding to its sensitivity to high soil pH. Plants are categorised as either calcifuge (intolerant of basic soils) or calcicole (tolerant of basic soils, such as calcareous sands and limestone derived soils). |
comments | |
value type | categorical variable |
has narrower |
plant_tolerance_calcicole_calcicole Plants are tolerant of basic soils, such as calcareous sands and limestone derived soils. plant_tolerance_calcicole_calcifuge Plants are intolerant of basic soils. (Synonyms, acidophilous) |
has broader |
chemical stress sensitivity trait environmental tolerance trait |
plant structure | whole plant |
measured characteristic |
resistance to tolerance sensitivity organismal quality |
keyword |
environmental condition calcium sensitivity soil pH growth media pH sensitivity resource availability |
scope note | |
has exact match | |
has close match | calcium sensitivity |
has related match | growth media pH sensitivity |
examples |
related match: Ellenberg reaction value [TOP781] (https://top-thesaurus.org/index) exact match: Species tolerance to CaCO3 [TRY:595] (https://www.try-db.org/de/de.php) |
references |
Cross & Lambers 2021 Tyler 2003 |
date created | 14/07/2021 |
date modified | 05/02/2024 |
date reviewed | |
reviewed by | no reviewers |
change note | calcicole_status |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030817 |
Plant fire tolerance strategy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/trait_0030818 |
alternative label | plant_tolerance_fire |
description |
A fire response trait indicating morphological [PATO_0000051] features that protect individuals [EFO:0000542] from death [GO_0016265] when a fire [ENVO:01000786] occurs nearby. Classification scheme of plant fire tolerance, indicating morphological characteristics plants use to survive fire. |
comments | |
value type | categorical variable |
has narrower |
plant_tolerance_fire_fire_retardant Plants protected from fire by fire retardant in their bark, stems, or other tissues. plant_tolerance_fire_fire_retardant_bark Plants protected from fire by fire retardant in their bark. plant_tolerance_fire_thick_bark Plants protected from fire by thick bark. |
has broader |
fire response trait plant structure morphology trait |
plant structure | whole plant |
measured characteristic |
organismal quality tolerance sensitivity structure |
keyword |
fire survival |
scope note | |
has exact match | |
has close match | |
has related match | |
examples | exact match: Species tolerance to fire [TRY:318] (https://www.try-db.org/de/de.php) |
references | no linked references |
date created | 23/02/2023 |
date modified | 05/02/2024 |
date reviewed | 31/05/2023 |
reviewed by |
Elizabeth Wenk Rachael Gallagher Russell Barrett Carl Gosper Rachael Nolan Tony Auld Tom Le Breton Matthew White Sophie Yang |
change note | |
is in scheme | https://w3id.org/APD/traits |
identifier | trait_0030818 |
4. Values for categorical traits
This section of the ontology expresses allowed categorical trait values for each trait concept. These terms are each defined and linked to a single trait concept to reduce ambiguity.
Plant spinescence
no_spines
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_spinescence_no_spines |
description | No spines. (level 0) |
has broader | Plant spinescence |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_spinescence_no_spines |
low_density_soft_spines
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_spinescence_low_density_soft_spines |
description | Low or very local density of soft spines <5mm long; plant may sting or prickle when hit carelessly but not impart strong pain. (level 1) |
has broader | Plant spinescence |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_spinescence_low_density_soft_spines |
high_density_soft_spines
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_spinescence_high_density_soft_spines |
description | High density of soft spines, intermediate density of spines of intermediate hardness, or low density of hard, sharp spines >5mm long; plant causes actual pain when hit carelessly. (level 2) |
has broader | Plant spinescence |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_spinescence_high_density_soft_spines |
high_density_hard_spines_to_5mm
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_spinescence_high_density_hard_spines_to_5mm |
description | Intermediate or high density of hard, sharp spines >5mm long; plant causes strong pain when hit carelessly. (level 3) |
has broader | Plant spinescence |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_spinescence_high_density_hard_spines_to_5mm |
high_density_hard_spines_to_20mm
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_spinescence_high_density_hard_spines_to_20mm |
description | Intermediate or high density of hard, sharp spines >20mm long; plant may cause significant wounds when hit carelessly. (level 4) |
has broader | Plant spinescence |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_spinescence_high_density_hard_spines_to_20mm |
high_density_hard_spines_to_100mm
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_spinescence_high_density_hard_spines_to_100mm |
description | Intermediate or high density of hard, sharp spines >100mm long; plant is dangerous to careless large mammals, including humans. (level 5) |
has broader | Plant spinescence |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_spinescence_high_density_hard_spines_to_100mm |
Embryo colour
colourless
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/embryo_colour_colourless |
description | Colourless embryo. |
has broader | Embryo colour |
is in scheme | https://w3id.org/APD/traits |
identifier | embryo_colour_colourless |
green
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/embryo_colour_green |
description | Green embryo. |
has broader | Embryo colour |
is in scheme | https://w3id.org/APD/traits |
identifier | embryo_colour_green |
Cotyledon function
foliaceous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/cotyledon_function_foliaceous |
description | Cotyledons are photosynthetic and function as leaves. |
has broader | Cotyledon function |
is in scheme | https://w3id.org/APD/traits |
identifier | cotyledon_function_foliaceous |
reserve
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/cotyledon_function_reserve |
description | Cotyledons function as energy reserve organs. |
has broader | Cotyledon function |
is in scheme | https://w3id.org/APD/traits |
identifier | cotyledon_function_reserve |
Cotyledon position at germination
cryptocotylar
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/cotyledon_position_cryptocotylar |
description | A type of seed germination in which the cotyledons remain within the seed coat at germination. |
has broader | Cotyledon position at germination |
is in scheme | https://w3id.org/APD/traits |
identifier | cotyledon_position_cryptocotylar |
phanerocotylar
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/cotyledon_position_phanerocotylar |
description | A type of seed germination in which the cotyledons emerge from the seed coat. |
has broader | Cotyledon position at germination |
is in scheme | https://w3id.org/APD/traits |
identifier | cotyledon_position_phanerocotylar |
Cotyledon hairiness
glabrous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/cotyledon_hairs_glabrous |
description | Cotyledons lack hairs. |
has broader | Cotyledon hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | cotyledon_hairs_glabrous |
hairy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/cotyledon_hairs_hairy |
description | Cotyledons have hairs. |
has broader | Cotyledon hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | cotyledon_hairs_hairy |
Hypocotyl hairiness
glabrous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedling_hypocotyl_hairs_glabrous |
description | Hypocotyl lacks hairs. |
has broader | Hypocotyl hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | seedling_hypocotyl_hairs_glabrous |
hairy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedling_hypocotyl_hairs_hairy |
description | Hypocotyl has hairs. |
has broader | Hypocotyl hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | seedling_hypocotyl_hairs_hairy |
Seedling first true leaf type
scale-like
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedling_first_node_leaf_type_scale-like |
description | The leaf at the first stem node above the epicotyl is scale-like, also referred to as a cataphyll. |
has broader | Seedling first true leaf type |
is in scheme | https://w3id.org/APD/traits |
identifier | seedling_first_node_leaf_type_scale-like |
leaf-like
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedling_first_node_leaf_type_leaf-like |
description | The leaf at the first stem node above the epicotyl is leaf-like (broad). |
has broader | Seedling first true leaf type |
is in scheme | https://w3id.org/APD/traits |
identifier | seedling_first_node_leaf_type_leaf-like |
Seedling first node leaf count
single
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedling_first_node_leaf_count_single |
description | There is a single leaf at the first stem node above the epicotyl. |
has broader | Seedling first node leaf count |
is in scheme | https://w3id.org/APD/traits |
identifier | seedling_first_node_leaf_count_single |
paired
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedling_first_node_leaf_count_paired |
description | There is a pair of leaves at the first stem node above the epicotyl. |
has broader | Seedling first node leaf count |
is in scheme | https://w3id.org/APD/traits |
identifier | seedling_first_node_leaf_count_paired |
Seedling germination location
epigeal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedling_germination_location_epigeal |
description | Germinant with one or more cotyledons emerging aboveground. |
has broader | Seedling germination location |
is in scheme | https://w3id.org/APD/traits |
identifier | seedling_germination_location_epigeal |
hypogeal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedling_germination_location_hypogeal |
description | Germinant with all cotyledons remaining belowground. |
has broader | Seedling germination location |
is in scheme | https://w3id.org/APD/traits |
identifier | seedling_germination_location_hypogeal |
Leaf type
broadleaf
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_type_broadleaf |
description | Flat leaf lamina, regardless of whether the leaves are or are not toothed, lobed, or compound. |
has broader | Leaf type |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_type_broadleaf |
needle
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_type_needle |
description | Needle or awl-shaped leaf that is generally 3-dimensional. |
has broader | Leaf type |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_type_needle |
scale
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_type_scale |
description | Leaf reduced to a small scale. |
has broader | Leaf type |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_type_scale |
leafless
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_type_leafless |
description | An adult stage plant that lacks leaves throughout the year. |
has broader | Leaf type |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_type_leafless |
Leaf shape
linear
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_linear |
description | A 2-dimensional shape that is very long and narrow, has parallel sides and a length:width ratio between 12:1 and 6:1. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_linear |
narrowly_oblong
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_narrowly_oblong |
description | A 2-dimensional shape that is long and narrow, has parallel sides and a length:width ratio between 6:1 and 3:1. (Synonyms, lorate) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_narrowly_oblong |
oblong
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_oblong |
description | A 2-dimensional shape that is somewhat elongated with parallel sides and a length:width ratio between 2:1 and 3:2. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_oblong |
linear_elliptical
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_linear_elliptical |
description | A 2-dimensional shape that is a very narrow oval, with curved margins, lacking a distinct point, and a length:width ratio between 12:1 and 6:1. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_linear_elliptical |
narrowly_elliptical
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_narrowly_elliptical |
description | A 2-dimensional shape that is a narrow oval, with curved margins, lacking a distinct point, and a length:width ratio between 6:1 and 3:1. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_narrowly_elliptical |
elliptical
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_elliptical |
description | A 2-dimensional shape that is an oval, with curved margins, lacking a distinct point, and a length:width ratio between 2:1 and 3:2. (Synonyms, oval) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_elliptical |
widely_elliptical
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_widely_elliptical |
description | A 2-dimensional shape that is a broad oval, with curved margins, lacking a distinct point, and a length:width ratio of approximately 6:5. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_widely_elliptical |
orbicular
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_orbicular |
description | A 2-dimensional shape that is approximately circular. (Synonyms, circular) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_orbicular |
oblate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_oblate |
description | A 2-dimensional shape that is a broad oval, with curved margins, lacking a distinct point, and a length:width ratio of approximately 5:6. The petiole attaches along the broader side. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_oblate |
narrowly_lanceolate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_narrowly_lanceolate |
description | A 2-dimensional shape that is very narrowly egg-shaped or teardrop-shaped, with a length:width ratio between 12:1 and 6:1. The petiole attaches near the wide, curved portion of the leaf lamina. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_narrowly_lanceolate |
lanceolate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_lanceolate |
description | A 2-dimensional shape that is narrowly egg-shaped or teardrop-shaped, with a length:width ratio between 6:1 and 3:1. The petiole attaches near the wide, curved portion of the leaf lamina. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_lanceolate |
narrowly_ovate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_narrowly_ovate |
description | A 2-dimensional shape that is narrowly egg-shaped, with a length:width ratio between 3:1 and 2:1. The petiole attaches near the wide, curved portion of the leaf lamina. (Synonyms, lance_ovate, widely_lanceolate) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_narrowly_ovate |
ovate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_ovate |
description | A 2-dimensional shape that is egg-shaped, with a length:width ratio between 2:1 and 3:2. The petiole attaches near the wide, curved portion of the leaf lamina. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_ovate |
widely_ovate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_widely_ovate |
description | A 2-dimensional shape that is broadly egg-shaped with a length:width ratio of approximately 6:5. The petiole attaches near the wide, curved portion of the leaf lamina. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_widely_ovate |
narrowly_oblanceolate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_narrowly_oblanceolate |
description | A 2-dimensional shape that is very narrowly teardrop-shaped, with a length:width ratio between 12:1 and 6:1. The leaf lamina has curved outer margins and narrows nearly to a point where it attaches to the petiole. (Synonyms, linear_oblanceolate) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_narrowly_oblanceolate |
oblanceolate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_oblanceolate |
description | A 2-dimensional shape that is narrowly teardrop-shaped, with a length:width ratio between 6:1 and 3:1. The leaf lamina has curved outer margins and narrows nearly to a point where it attaches to the petiole. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_oblanceolate |
narrowly_obovate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_narrowly_obovate |
description | A 2-dimensional shape that is narrowly egg-shaped or teardrop-shaped with a length:width ratio between 3:1 and 2:1. The leaf lamina has curved outer margins and narrows nearly to a point where it attaches to the petiole. (Synonyms, oblance-obovate) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_narrowly_obovate |
obovate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_obovate |
description | A 2-dimensional shape that is egg-shaped with a length:width ratio between 2:1 and 3:2. The leaf lamina has curved outer margins and narrows nearly to a point where it attaches to the petiole. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_obovate |
widely_obovate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_widely_obovate |
description | A 2-dimensional shape that is broadly egg-shaped with a length:width ratio of approximately 6:5. The leaf lamina has curved outer margins and narrows nearly to a point where it attaches to the petiole. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_widely_obovate |
narrowly_triangular
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_narrowly_triangular |
description | A 2-dimensional shape that is narrowly triangular to wedge-shaped, with a length:width ratio 6:1 to 3:1 and the petiole attaching near the widest portion of the leaf. (Synonyms, triangular) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_narrowly_triangular |
triangular
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_triangular |
description | A 2-dimensional shape that is triangular to wedge-shaped, with a length:width ratio 2:1 to 3:2 and the petiole attaching near the widest portion of the leaf. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_triangular |
deltate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_deltate |
description | A 2-dimensional shape that is triangular to wedge-shaped, with a length:width ratio of 1:1 and the petiole attaching along one of the broad sides. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_deltate |
obtriangular
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_obtriangular |
description | A 2-dimensional shape that is triangular to fan-shaped or wedge-shaped, with a length:width ratio 2:1 to 3:2 and the petiole attaching near the narrowest portion of the leaf. (Synonyms, flabelliform, fan-shaped, wedge-shaped, cuneate) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_obtriangular |
narrowly_rhomboidal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_narrowly_rhomboidal |
description | A 2-dimensional shape that is like a narrow diamond, with approximately straight edges, widest near the middle, and a length:width ratio 6:1 to 3:1. The petiole attaches near one of the points. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_narrowly_rhomboidal |
rhomboidal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_rhomboidal |
description | A 2-dimensional shape that is approximately diamond or parallelogram-shaped, with approximately straight edges, widest near the middle, and a length:width ratio 2:1 to 3:2. The petiole attaches near one of the points. (Synonyms, rhombic, diamond) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_rhomboidal |
trullate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_trullate |
description | A 2-dimensional shape that is approximately parallelogram-shaped, widest near where the petiole attaches (base), and with a length:width ratio 2:1 to 3:2. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_trullate |
narrowly_obtrullate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_narrowly_obtrullate |
description | A 2-dimensional shape that is narrowly parallelogram-shaped, widest near the tip, and with a length:width ratio 3:1 to 6:1. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_narrowly_obtrullate |
obtrullate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_obtrullate |
description | A 2-dimensional shape that is approximately parallelogram-shaped, widest near the tip, and with a length:width ratio 2:1 to 3:2. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_obtrullate |
widely_obtrullate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_widely_obtrullate |
description | A 2-dimensional shape that is broadly parallelogram-shaped, widest near the tip, and with a length:width ratio of approximately 6:5. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_widely_obtrullate |
acicular
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_acicular |
description | A 2-dimensional or 3-dimensional shape with a needlelike tip, often round in cross-section, with margins straight and parallel, and a length:width ratio greater than 12:1. (Synonyms, needle-shaped) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_acicular |
terete
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_terete |
description | A 3-dimensional shape that is a long, narrow cylinder approximately circular in cross-section. Terete leaves often taper toward the tip. (Synonym, cylindrical) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_terete |
cordate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_cordate |
description | A 2-dimensional heart shape, approximately ovate with a cordate base, with the petiole attaching at the notch between the lobes. (Synonyms, cordiform) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_cordate |
obcordate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_obcordate |
description | A 2-dimensional heart shape, approximately ovate with a cordate apex, and the petiole attaching along the broad, curve side. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_obcordate |
falcate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_falcate |
description | A 2-dimensional sickle-shape, approximately lanceolate to linear and curved on one side. (Synonyms, scimitar-shaped, sickle-shaped, falciform, crescent-shaped) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_falcate |
reniform
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_reniform |
description | A 2-dimensional shape that is roughly kidney-shaped, wider than long with a rounded apex and two rounded, basal lobes that are smoothly concave at their intersection. (Synonyms, kidney-shaped) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_reniform |
spathulate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_spathulate |
description | A 2-dimensional shape that can be approximately oblong, obovate, or oblanceolate in outline with a long attenuate base, like a spoon. (Synonyms, spoon-shaped, clavate) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_spathulate |
strap-shaped
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_strap-shaped |
description | A 2-dimensional shape that is strap-shaped with a rounded tip and a length:width ratio greater than 12:1. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_strap-shaped |
ensiform
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_ensiform |
description | A 2-dimensional shape that is sword-shaped with a pointed tip and a length:width ratio greater than 12:1. (Synonyms, sword-shaped) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_ensiform |
subulate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_subulate |
description | A 2-dimensional shape that is awl-shaped, approximately narrowly oblong to narrowly triangular with a broad base. (Synonyms, awl-shaped) |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_subulate |
peltate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_peltate |
description | A 2-dimensional orbicular shape, distinguished by the petiole attaching near the center of the leaf lamina. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_peltate |
filiform
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_shape_filiform |
description | A 2-dimensional shape that is long, thin, and typically flexuous, threadlike, filamentous. |
has broader | Leaf shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_shape_filiform |
Leaf base shape
acute
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_base_shape_acute |
description | Two sides of the leaf meet at an angle that is less than 90<U+00B0>. |
has broader | Leaf base shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_base_shape_acute |
attenuate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_base_shape_attenuate |
description | Basal leaf margin abruptly incurved (concave), the two sides intersecting at an angle of less than 45<U+00B0>. |
has broader | Leaf base shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_base_shape_attenuate |
auriculate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_base_shape_auriculate |
description | Basal leaf margin with two rounded lobes. The leaf margin above the lobes is concave. The petiole attaches in the incised region between the lobes. |
has broader | Leaf base shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_base_shape_auriculate |
cordate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_base_shape_cordate |
description | Basal leaf margin with two rounded lobes and the petiole attaches in the incised region between the lobes. The leaf margin above the lobes is rounded. |
has broader | Leaf base shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_base_shape_cordate |
cuneate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_base_shape_cuneate |
description | Basal leaf margin approximately straight, the two sides intersecting at an angle between 45<U+00B0> to 90<U+00B0>. |
has broader | Leaf base shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_base_shape_cuneate |
hastate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_base_shape_hastate |
description | Basal leaf margin with two lobes oriented outward, such that they are at approximately 90<U+00B0> relative to the central axis and the leaf margin is fairly flat at the base. |
has broader | Leaf base shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_base_shape_hastate |
oblique
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_base_shape_oblique |
description | The leaf base is asymmetrical, with the midrib not lying in the middle of the leaf where it attaches to the petiole. |
has broader | Leaf base shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_base_shape_oblique |
obtuse
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_base_shape_obtuse |
description | Two sides of the leaf meet at an angle that is greater than 90<U+00B0>. |
has broader | Leaf base shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_base_shape_obtuse |
rounded
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_base_shape_rounded |
description | Basal leaf margin is rounded. |
has broader | Leaf base shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_base_shape_rounded |
sagittate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_base_shape_sagittate |
description | Basal leaf margin with two lobes oriented downward, away from apex. The petiole attaches in the concave region between the lobes. |
has broader | Leaf base shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_base_shape_sagittate |
sheathing
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_base_shape_sheathing |
description | The leaf base is broad and envelops the stem. |
has broader | Leaf base shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_base_shape_sheathing |
truncate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_base_shape_truncate |
description | The basal leaf margin is cut straight across with the two sides intersecting at approximately 180<U+00B0>. |
has broader | Leaf base shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_base_shape_truncate |
Leaf margin
entire
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_margin_entire |
description | Leaf margin lacks projections or indentations that extend less than 1/8 of the distance to the midrib. |
has broader | Leaf margin |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_margin_entire |
toothed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_margin_toothed |
description | Leaf margin has small projections or lobes along the edge of the leaf lamina. This is a broad term that includes serrate, dentate, and crenulate. |
has broader | Leaf margin |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_margin_toothed |
toothed_serrate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_margin_toothed_serrate |
description | Type of toothed leaf margin with sharp teeth that are angled toward the tip of the leaf. (Synonyms, saw-toothed) |
has broader | Leaf margin |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_margin_toothed_serrate |
toothed_dentate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_margin_toothed_dentate |
description | Type of toothed leaf margin with sharp teeth that point outwards at right angles to the leaf margin. |
has broader | Leaf margin |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_margin_toothed_dentate |
toothed_crenate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_margin_toothed_crenate |
description | Type of toothed leaf margin with teeth that are rounded or obtuse, rather than having a sharp apex. [PO:0025519] |
has broader | Leaf margin |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_margin_toothed_crenate |
Leaf margin posture
involute
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_margin_posture_involute |
description | Leaf margins along the side of the leaf are rolled upward, such that the margin of the adaxial (upper) leaf surface is rolled inward. (Synonym, inrolled, incurved) |
has broader | Leaf margin posture |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_margin_posture_involute |
revolute
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_margin_posture_revolute |
description | Leaf margins along the side of the leaf are rolled under or downward, such that the margin of the abaxial (lower) leaf surface is rolled inward. [PATO:0001963] (Synonym, recurved) |
has broader | Leaf margin posture |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_margin_posture_revolute |
flat
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_margin_posture_flat |
description | Leaf lamina, including margins, is a 2-dimensional plane. [PATO:0000407] |
has broader | Leaf margin posture |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_margin_posture_flat |
undulate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_margin_posture_undulate |
description | Leaf margins are wavy in their 2-dimensional plane. (Synonyms, wavy, rippled, sinuate) |
has broader | Leaf margin posture |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_margin_posture_undulate |
Leaf lobation
unlobed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lobation_unlobed |
description | Leaf margin lacks projections or indentations that extend more than 1/8 of the distance to the midrib. |
has broader | Leaf lobation |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lobation_unlobed |
lobed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lobation_lobed |
description | Leaf margin has incisions, either rounded or sharp-tipped, that extend more than 1/8 of the distance to the midrib. |
has broader | Leaf lobation |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lobation_lobed |
lobed_deep
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lobation_lobed_deep |
description | Leaf margin with lobes that extend more than halfway to the midrib. (Synonyms, parted, divided) |
has broader | Leaf lobation |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lobation_lobed_deep |
lobed_shallow
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lobation_lobed_shallow |
description | Leaf margin with lobes that extend less than halfway to the midrib. (Synonyms, cleft, sinuate) |
has broader | Leaf lobation |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lobation_lobed_shallow |
Leaf compoundness
simple
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_compoundness_simple |
description | A leaf with a single undivided blade. [PO:0020042] |
has broader | Leaf compoundness |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_compoundness_simple |
compound
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_compoundness_compound |
description | A leaf that is divided into multiple leaflets. [PO:0020043] |
has broader | Leaf compoundness |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_compoundness_compound |
Leaf divisions
pinnately_lobed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_pinnately_lobed |
description | Leaf with divisions that are symmetrical across a central axis, usually the midvein. |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_pinnately_lobed |
palmately_lobed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_palmately_lobed |
description | Leaf with divisions that radiate from a single point, usually the basal junction of major veins. |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_palmately_lobed |
pinnatifid
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_pinnatifid |
description | Leaf with lobes that extend less than half-way to the midrib. |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_pinnatifid |
bipinnatifid
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_bipinnatifid |
description | Leaf that is twice pinnatifid, with two series of lobes that extend less than half-way to the midrib. |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_bipinnatifid |
pinnatipartite
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_pinnatipartite |
description | Leaf with lobes that extend more than half-way to the midrib. |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_pinnatipartite |
pinnatisect
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_pinnatisect |
description | Leaf with lobes that extend nearly to the midrib but the divisions are not separated into distinct leaflets. |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_pinnatisect |
bipinnatipartite
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_bipinnatipartite |
description | Leaf that is twice pinnatipartite, with two series of lobes that extend more than half-way to the midrib. |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_bipinnatipartite |
bipinnatisect
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_bipinnatisect |
description | Leaf that is twice pinnatisect, with two series of lobes that extend nearly to the midrib but the divisions are not separated into distinct leaflets. |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_bipinnatisect |
trichotomously_lobed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_trichotomously_lobed |
description | Leaf divided repeatedly into three lobes. |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_trichotomously_lobed |
dichotomously_lobed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_dichotomously_lobed |
description | Leaf divided repeatedly into two lobes. |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_dichotomously_lobed |
bipartite
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_bipartite |
description | Leaf divided into two lobes. |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_bipartite |
tripartite
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_tripartite |
description | Leaf divided into three lobes. |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_tripartite |
pinnately_compound
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_pinnately_compound |
description | Leaf divided into leaflets that attach along a central axis. [PATO_0000410] |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_pinnately_compound |
palmately_compound
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_palmately_compound |
description | Leaf divided into leaflets that attach to a central point. (Synonyms, digitate) |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_palmately_compound |
bipinnate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_bipinnate |
description | Leaf that is twice pinnate, having pinnate leaflets that are themselves pinnately divided. |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_bipinnate |
tripinnate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_tripinnate |
description | Leaf that is three times pinnate, with pinnate leaflets that are twice more pinnately divided. |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_tripinnate |
trifoliate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_division_trifoliate |
description | Leaf divided into three leaflets. (Synonyms, ternate, trifoliolate) |
has broader | Leaf divisions |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_division_trifoliate |
Leaf lamina posture (leaf 3-dimensional shape
concave
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_posture_concave |
description | A longitudinal posture term indicating the leaf lamina is curved upward along the central axis, such that the upper leaf lamina surface is concave. |
has broader | Leaf lamina posture (leaf 3-dimensional shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_posture_concave |
conduplicate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_posture_conduplicate |
description | A longitudinal posture term indicating the leaf lamina is folded upward along the central axis. (Synonym, folded) |
has broader | Leaf lamina posture (leaf 3-dimensional shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_posture_conduplicate |
convex
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_posture_convex |
description | A longitudinal posture term indicating the leaf lamina is curved downward along the central axis, such that the lower leaf lamina surface is concave. (Synonym, concavoconvex, planoconvex) |
has broader | Leaf lamina posture (leaf 3-dimensional shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_posture_convex |
convolute
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_posture_convolute |
description | Leaf lamina is contorted. (Synonym, twisted) |
has broader | Leaf lamina posture (leaf 3-dimensional shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_posture_convolute |
flat
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_posture_flat |
description | The leaf lamina is a 2-dimensional plane. |
has broader | Leaf lamina posture (leaf 3-dimensional shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_posture_flat |
incurved
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_posture_incurved |
description | Leaf tip is curved upward. |
has broader | Leaf lamina posture (leaf 3-dimensional shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_posture_incurved |
involute
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_posture_involute |
description | A longitudinal posture term indicating the outer portions of the leaf lamina are rolled inward or upward. |
has broader | Leaf lamina posture (leaf 3-dimensional shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_posture_involute |
plicate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_posture_plicate |
description | Leaf margin is pleated, with a series of longitudinal folds. |
has broader | Leaf lamina posture (leaf 3-dimensional shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_posture_plicate |
recurved
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_posture_recurved |
description | Leaf tip is curved outward or downward. [PATO:0002211] |
has broader | Leaf lamina posture (leaf 3-dimensional shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_posture_recurved |
revolute
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_posture_revolute |
description | A longitudinal posture term indicating the outer portions of the leaf lamina are rolled outward or downward. |
has broader | Leaf lamina posture (leaf 3-dimensional shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_posture_revolute |
undulate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_lamina_posture_undulate |
description | The leaf lamina surface is rippled or wavy in its 2-dimensional plane. [PATO:0000967] (Synonyms, wavy, rippled, sinuate) |
has broader | Leaf lamina posture (leaf 3-dimensional shape |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_lamina_posture_undulate |
Leaf glaucousness
glaucous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_glaucousness_glaucous |
description | Mature (fully expanded) leaves on adult plants have a waxy coating, giving them a glaucous appearance. (Synonyms, waxy bloom, pruinose) |
has broader | Leaf glaucousness |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_glaucousness_glaucous |
not_glaucous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_glaucousness_not_glaucous |
description | Mature (fully expanded) leaves on adult plants do not have a glaucous appearance. |
has broader | Leaf glaucousness |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_glaucousness_not_glaucous |
Mature leaf hairiness
glabrous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_hairs_adult_leaves_glabrous |
description | Mature (fully expanded) leaves on adult plants do not have hairs (trichomes). |
has broader | Mature leaf hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_hairs_adult_leaves_glabrous |
hairy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_hairs_adult_leaves_hairy |
description | Mature (fully expanded) leaves on adult plants have hairs (trichomes). |
has broader | Mature leaf hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_hairs_adult_leaves_hairy |
Juvenile phase leaf hairiness
glabrous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_hairs_juvenile_leaves_glabrous |
description | Juvenile phase leaves do not have hairs (trichomes). |
has broader | Juvenile phase leaf hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_hairs_juvenile_leaves_glabrous |
hairy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_hairs_juvenile_leaves_hairy |
description | Juvenile phase leaves have hairs (trichomes). |
has broader | Juvenile phase leaf hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_hairs_juvenile_leaves_hairy |
Immature leaf hairiness
glabrous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_hairs_immature_leaves_glabrous |
description | Immature (still expanding) leaves do not have hairs (trichomes). |
has broader | Immature leaf hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_hairs_immature_leaves_glabrous |
hairy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_hairs_immature_leaves_hairy |
description | Immature (still expanding) leaves have hairs (trichomes). |
has broader | Immature leaf hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_hairs_immature_leaves_hairy |
Leaf surface colour
green
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_surface_colour_green |
description | Leaf lamina surface is green. |
has broader | Leaf surface colour |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_surface_colour_green |
grey_green
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_surface_colour_grey_green |
description | Leaf lamina surface is grey-green. |
has broader | Leaf surface colour |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_surface_colour_grey_green |
dark_green
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_surface_colour_dark_green |
description | Leaf lamina surface is dark green. |
has broader | Leaf surface colour |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_surface_colour_dark_green |
pale_green
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_surface_colour_pale_green |
description | Leaf lamina surface is pale green. |
has broader | Leaf surface colour |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_surface_colour_pale_green |
pale_grey_green
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_surface_colour_pale_grey_green |
description | Leaf lamina surface is pale grey-green. |
has broader | Leaf surface colour |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_surface_colour_pale_grey_green |
dark_grey_green
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_surface_colour_dark_grey_green |
description | Leaf lamina surface is dark grey-green. |
has broader | Leaf surface colour |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_surface_colour_dark_grey_green |
red
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_surface_colour_red |
description | Leaf lamina surface is red. |
has broader | Leaf surface colour |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_surface_colour_red |
purple
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_surface_colour_purple |
description | Leaf lamina surface is purple. |
has broader | Leaf surface colour |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_surface_colour_purple |
Leaf surface reflectivity
dull
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_surface_reflectivity_dull |
description | Leaf surface appears dull, indicating it has a low reflectivity. |
has broader | Leaf surface reflectivity |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_surface_reflectivity_dull |
shiny
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_surface_reflectivity_shiny |
description | Leaf surface appears shiny or glossy, indicating it has a high reflectivity. (Synonyms, glossy, lustrous, polished) |
has broader | Leaf surface reflectivity |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_surface_reflectivity_shiny |
Leaf phyllotaxis
alternate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_phyllotaxis_alternate |
description | A single leaf is attached at each stem node. |
has broader | Leaf phyllotaxis |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_phyllotaxis_alternate |
opposite
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_phyllotaxis_opposite |
description | A pair of leaves are attached opposite to one another at each stem node. |
has broader | Leaf phyllotaxis |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_phyllotaxis_opposite |
whorled
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_phyllotaxis_whorled |
description | Three or more leaves are attached at each stem node, arranged in a symmetrical pattern around the stem. (Synonyms, verticillate) |
has broader | Leaf phyllotaxis |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_phyllotaxis_whorled |
Leaf arrangement
decussate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_arrangement_decussate |
description | When sequential pairs of opposite leaves attach at right angles to the pair above or below. |
has broader | Leaf arrangement |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_arrangement_decussate |
distichous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_arrangement_distichous |
description | When alternate or opposite leaves are arranged in two opposite rows. |
has broader | Leaf arrangement |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_arrangement_distichous |
scattered
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_arrangement_scattered |
description | When leaves are attached along the entire length of stem. |
has broader | Leaf arrangement |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_arrangement_scattered |
spiral
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_arrangement_spiral |
description | When alternate leaves are attached in a progressive spiral pattern along the stem. |
has broader | Leaf arrangement |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_arrangement_spiral |
fasciculate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_arrangement_fasciculate |
description | A tight bundle or cluster of leaves attaches to the stem in a single location, generally due to the shortening of internodes. (Synonym, tufted) |
has broader | Leaf arrangement |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_arrangement_fasciculate |
clustered
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_arrangement_clustered |
description | When leaves are in any type of cluster, where the type of cluster is not further specified. The leaves may be clustered toward the base of the plant (a rosette), toward the top of the plant, toward the end of branches, or in distinct tuft (fascicles), but more information is not provided. |
has broader | Leaf arrangement |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_arrangement_clustered |
clustered_basal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_arrangement_clustered_basal |
description | When leaves are clustered or crowded to the base of the stem, arranged in a rosette or other basal clustering. (Synonym, rosette) |
has broader | Leaf arrangement |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_arrangement_clustered_basal |
crowded
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_arrangement_crowded |
description | When internode length varies considerably along a stem, such that leaves appear crowded or tufted. (Synonym, congested) |
has broader | Leaf arrangement |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_arrangement_crowded |
rosette
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_arrangement_rosette |
description | When leaves radiate from a central point at or near ground level. |
has broader | Leaf arrangement |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_arrangement_rosette |
imbricate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_arrangement_imbricate |
description | When leaves lay tightly against the stem and are overlapping. |
has broader | Leaf arrangement |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_arrangement_imbricate |
Leaf pendulousness
pendulous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_pendulousness_pendulous |
description | Leaves are pendulous. |
has broader | Leaf pendulousness |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_pendulousness_pendulous |
not_pendulous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_pendulousness_not_pendulous |
description | Leaves are not pendulous. |
has broader | Leaf pendulousness |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_pendulousness_not_pendulous |
Stomatal distribution
amphistomatic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_stomatal_distribution_amphistomatic |
description | Leaves with stomata on both leaf surfaces. |
has broader | Stomatal distribution |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_stomatal_distribution_amphistomatic |
amphistomatic_uneven
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_stomatal_distribution_amphistomatic_uneven |
description | Leaves with stomata on both leaf surfaces but more stomata on the lower leaf surface. |
has broader | Stomatal distribution |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_stomatal_distribution_amphistomatic_uneven |
epistomatic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_stomatal_distribution_epistomatic |
description | Leaves that only have stomata on the upper (adaxial) leaf surface. |
has broader | Stomatal distribution |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_stomatal_distribution_epistomatic |
hypostomatic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_stomatal_distribution_hypostomatic |
description | Leaves that only have stomata on the lower (abaxial) leaf surface. |
has broader | Stomatal distribution |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_stomatal_distribution_hypostomatic |
Stomatal hairiness
stomata_covered_with_dense_hairs
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_stomatal_hairs_stomata_covered_with_dense_hairs |
description | Stomata densely covered by hairs. |
has broader | Stomatal hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_stomatal_hairs_stomata_covered_with_dense_hairs |
stomata_not_covered_by_hairs
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_stomatal_hairs_stomata_not_covered_by_hairs |
description | Stomata not hair-covered. |
has broader | Stomatal hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_stomatal_hairs_stomata_not_covered_by_hairs |
Stem hairiness
glabrous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_hairs_glabrous |
description | Adult plant stems do not have hairs (trichomes). |
has broader | Stem hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_hairs_glabrous |
hairy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_hairs_hairy |
description | Adult plant stems have hairs (trichomes). |
has broader | Stem hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_hairs_hairy |
Bark morphology, Eucalyptus
eucalypt_box
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bark_morphology_eucalyptus_eucalypt_box |
description | Eucalyptus, Corymbia or Angophora taxa with ‘Box’ type bark. |
has broader | Bark morphology, Eucalyptus |
is in scheme | https://w3id.org/APD/traits |
identifier | bark_morphology_eucalyptus_eucalypt_box |
eucalypt_gum
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bark_morphology_eucalyptus_eucalypt_gum |
description | Eucalyptus, Corymbia or Angophora taxa with ‘Gum’ type bark. |
has broader | Bark morphology, Eucalyptus |
is in scheme | https://w3id.org/APD/traits |
identifier | bark_morphology_eucalyptus_eucalypt_gum |
eucalypt_stocking
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bark_morphology_eucalyptus_eucalypt_stocking |
description | Eucalyptus, Corymbia or Angophora taxa with ‘Gum’ type bark above a rough barked stocking. |
has broader | Bark morphology, Eucalyptus |
is in scheme | https://w3id.org/APD/traits |
identifier | bark_morphology_eucalyptus_eucalypt_stocking |
eucalypt_ironbark
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bark_morphology_eucalyptus_eucalypt_ironbark |
description | Eucalyptus, Corymbia or Angophora taxa with ‘Ironbark’ type bark. |
has broader | Bark morphology, Eucalyptus |
is in scheme | https://w3id.org/APD/traits |
identifier | bark_morphology_eucalyptus_eucalypt_ironbark |
eucalypt_peppermint
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bark_morphology_eucalyptus_eucalypt_peppermint |
description | Eucalyptus, Corymbia or Angophora taxa with ‘Peppermint’ type bark. |
has broader | Bark morphology, Eucalyptus |
is in scheme | https://w3id.org/APD/traits |
identifier | bark_morphology_eucalyptus_eucalypt_peppermint |
eucalypt_stringybark
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bark_morphology_eucalyptus_eucalypt_stringybark |
description | Eucalyptus, Corymbia or Angophora taxa with ‘Stringy’ type bark. |
has broader | Bark morphology, Eucalyptus |
is in scheme | https://w3id.org/APD/traits |
identifier | bark_morphology_eucalyptus_eucalypt_stringybark |
eucalypt_ribbonbark
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bark_morphology_eucalyptus_eucalypt_ribbonbark |
description | Eucalyptus, Corymbia or Angophora taxa with ‘Gum’ type bark that sheds in ribbons. |
has broader | Bark morphology, Eucalyptus |
is in scheme | https://w3id.org/APD/traits |
identifier | bark_morphology_eucalyptus_eucalypt_ribbonbark |
Root system morphology
type_i
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_system_classification_type_i |
description | The primary root is fibrous or fleshy and is relatively long; mesophytic. |
has broader | Root system morphology |
is in scheme | https://w3id.org/APD/traits |
identifier | root_system_classification_type_i |
type_ii
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_system_classification_type_ii |
description | The primary root is relatively short and is fibrous. Roots are well branched in a dry habitat but branch little in one that is wet. |
has broader | Root system morphology |
is in scheme | https://w3id.org/APD/traits |
identifier | root_system_classification_type_ii |
type_iii
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_system_classification_type_iii |
description | The primary root is usually long and fibrous. The first order lateral roots are well branched and are usually short; they are rather evenly distributed along the primary root; xerophytic. |
has broader | Root system morphology |
is in scheme | https://w3id.org/APD/traits |
identifier | root_system_classification_type_iii |
type_iv
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_system_classification_type_iv |
description | The primary root is usually long and slender like that of Type II. The first order lateral roots are well branched. Those closest to the surface of the ground, or not far below, are relatively long; xerophytic and mesophytic. |
has broader | Root system morphology |
is in scheme | https://w3id.org/APD/traits |
identifier | root_system_classification_type_iv |
type_v
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_system_classification_type_v |
description | The primary root is divided-forked or branched-and fibrous, and with few first order lateral roots, or, in age, apparently with none; xerophytic. |
has broader | Root system morphology |
is in scheme | https://w3id.org/APD/traits |
identifier | root_system_classification_type_v |
type_vi
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_system_classification_type_vi |
description | The primary root is usually as in Type V. The first order lateral roots are mostly on the upper portion of the primary root and are thus relatively superficial; xerophytic or in well aerated sandy soil where the rainfall is not light. |
has broader | Root system morphology |
is in scheme | https://w3id.org/APD/traits |
identifier | root_system_classification_type_vi |
type_vii
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_system_classification_type_vii |
description | Adventitious roots that are in one group and arise on a short horizontal, or vertical, axis of the shoot. They are fibrous or fleshly; mesophytic and hydrophytic. |
has broader | Root system morphology |
is in scheme | https://w3id.org/APD/traits |
identifier | root_system_classification_type_vii |
type_viii
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_system_classification_type_viii |
description | Adventitious roots that are in one group and are fibrous and fleshy, or fibrous and thick. The fibrous adventitious roots are absorbing-anchoring roots and are usually with laterals to the second order; meophytic. |
has broader | Root system morphology |
is in scheme | https://w3id.org/APD/traits |
identifier | root_system_classification_type_viii |
type_ix
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_system_classification_type_ix |
description | Adventitious roots that arise on the aerial stem and branches of some herbaceous taxa, shrubs, and trees; on creepers, vines, and runners; and on subterranean rhizomes and stolons. |
has broader | Root system morphology |
is in scheme | https://w3id.org/APD/traits |
identifier | root_system_classification_type_ix |
Root system type (presence of taproot
tap_root_absent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_system_type_tap_root_absent |
description | Tap root not present. |
has broader | Root system type (presence of taproot |
is in scheme | https://w3id.org/APD/traits |
identifier | root_system_type_tap_root_absent |
tap_root_present
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_system_type_tap_root_present |
description | Tap root present. |
has broader | Root system type (presence of taproot |
is in scheme | https://w3id.org/APD/traits |
identifier | root_system_type_tap_root_present |
tap_root_sometimes_present
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_system_type_tap_root_sometimes_present |
description | Tap root sometimes present. |
has broader | Root system type (presence of taproot |
is in scheme | https://w3id.org/APD/traits |
identifier | root_system_type_tap_root_sometimes_present |
Root vascular anatomy
cord_roots
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_vascular_anatomy_cord_roots |
description | A root anatomy found within three genera of Mirbelieae (Daviesia, Euchilopsis, Phyllota) wherein networks of interlinking vascular strands exist (Crisp 2003; Pate and Dixon 1996). |
has broader | Root vascular anatomy |
is in scheme | https://w3id.org/APD/traits |
identifier | root_vascular_anatomy_cord_roots |
unistelar_roots
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_vascular_anatomy_unistelar_roots |
description | The commonly observed root anatomy, wherein there is a single vascular strand which displays secondary thickening. |
has broader | Root vascular anatomy |
is in scheme | https://w3id.org/APD/traits |
identifier | root_vascular_anatomy_unistelar_roots |
Androecium structural phyllotaxis
whorled
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_androecium_structural_phyllotaxis_whorled |
description | Stamens and staminodes arranged in whorls. |
has broader | Androecium structural phyllotaxis |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_androecium_structural_phyllotaxis_whorled |
spiral
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_androecium_structural_phyllotaxis_spiral |
description | Stamens and staminodes have a spiral arrangement. |
has broader | Androecium structural phyllotaxis |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_androecium_structural_phyllotaxis_spiral |
irregular
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_androecium_structural_phyllotaxis_irregular |
description | Stamens and staminodes have an irregular arrangement. |
has broader | Androecium structural phyllotaxis |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_androecium_structural_phyllotaxis_irregular |
Anther attachment
basifixed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_attachment_basifixed |
description | Filament attached to the base of the connective. Laminar stamens are classified as basifixed. |
has broader | Anther attachment |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_attachment_basifixed |
dorsifixed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_attachment_dorsifixed |
description | Filament attached to the dorsal side of the anther. |
has broader | Anther attachment |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_attachment_dorsifixed |
dorsifixed_at_base
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_attachment_dorsifixed_at_base |
description | Filament attached to the dorsal side of the anther, at the base. |
has broader | Anther attachment |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_attachment_dorsifixed_at_base |
ventrifixed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_attachment_ventrifixed |
description | Filament attached to the ventral side of the anther. |
has broader | Anther attachment |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_attachment_ventrifixed |
Connective extension (apical
absent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_connective_extension_absent |
description | Apical connective extensions are lacking. |
has broader | Connective extension (apical |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_connective_extension_absent |
short_extension
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_connective_extension_short_extension |
description | Connective extension less than a third of the length of anther. |
has broader | Connective extension (apical |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_connective_extension_short_extension |
long_extension
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_connective_extension_long_extension |
description | Connective extension more than a third but less than length of anther; e.g. Idiospermum australiense. |
has broader | Connective extension (apical |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_connective_extension_long_extension |
very_long_extension
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_connective_extension_very_long_extension |
description | Connective extension more than length of anther; e.g. Galbulimima belgraveana. |
has broader | Connective extension (apical |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_connective_extension_very_long_extension |
present_general
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_connective_extension_present_general |
description | Apical connective extensions are present but no information on their length relative to the anthers. |
has broader | Connective extension (apical |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_connective_extension_present_general |
Anther dehiscence
longitudinal_slit
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_dehiscence_longitudinal_slit |
description | Anther with longitudinal slits that extend along the entire length of each theca. |
has broader | Anther dehiscence |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_dehiscence_longitudinal_slit |
poricidal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_dehiscence_poricidal |
description | Anther where dehiscence of longitudinal slits is incomplete, with pollen exiting via a small pore at the tip. |
has broader | Anther dehiscence |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_dehiscence_poricidal |
pores_many
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_dehiscence_pores_many |
description | Anther with pollen exiting from many pores along its length. |
has broader | Anther dehiscence |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_dehiscence_pores_many |
h_valvate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_dehiscence_h_valvate |
description | Anther with two valves on longitudinal hinges, opening horizontally as salon doors; when the stomium bifurcates at its distal and/or proximal end and thus a valve is formed. |
has broader | Anther dehiscence |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_dehiscence_h_valvate |
flap_valvate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_dehiscence_flap_valvate |
description | Anther with one or more flap-like valves on horizontal hinges, opening vertically. |
has broader | Anther dehiscence |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_dehiscence_flap_valvate |
transverse_slit
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_dehiscence_transverse_slit |
description | Anther with horizontal slit. |
has broader | Anther dehiscence |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_dehiscence_transverse_slit |
short_basal_slits
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_dehiscence_short_basal_slits |
description | Anther where dehiscence of longitudinal slits is incomplete and only occurs over a short extent at the base of the theca. |
has broader | Anther dehiscence |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_dehiscence_short_basal_slits |
short_central_slits
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_dehiscence_short_central_slits |
description | Anther where dehiscence of longitudinal slits is incomplete and only occurs over a short extent at the center of the theca. |
has broader | Anther dehiscence |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_dehiscence_short_central_slits |
short_apical_slits
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_dehiscence_short_apical_slits |
description | Anther where dehiscence of longitudinal slits is incomplete and only occurs over a short extent at the apical end of the theca. |
has broader | Anther dehiscence |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_dehiscence_short_apical_slits |
t_valvate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_dehiscence_t_valvate |
description | Anther with T-shaped stomium; reduced transverse slit at base. |
has broader | Anther dehiscence |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_dehiscence_t_valvate |
common_stomium_confluent_thecae
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_dehiscence_common_stomium_confluent_thecae |
description | The two thecae of a single anther are fused at one end with a single pore through which pollen exits. |
has broader | Anther dehiscence |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_dehiscence_common_stomium_confluent_thecae |
circular
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_dehiscence_circular |
description | Anther with a transverse slit that goes entirely around the anther. |
has broader | Anther dehiscence |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_dehiscence_circular |
Anther orientation
apical
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_orientation_apical |
description | When thecae are positioned in a transverse position at the tip of the connective and thus dehisce upward in the flower (e.g., Sinofranchetia, Endress and Hufford, 1989). |
has broader | Anther orientation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_orientation_apical |
extrorse
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_orientation_extrorse |
description | When the stomia of the thecae face the floral periphery. |
has broader | Anther orientation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_orientation_extrorse |
introrse
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_orientation_introrse |
description | When the stomia of the thecae face the floral centre. |
has broader | Anther orientation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_orientation_introrse |
latrorse
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_anther_orientation_latrorse |
description | When pollen is released toward the side (i.e., toward neighbouring anthers). |
has broader | Anther orientation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_anther_orientation_latrorse |
Flower colour
blue_purple
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_colour_blue_purple |
description | Flower colour is blue or purple. |
has broader | Flower colour |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_colour_blue_purple |
green
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_colour_green |
description | Flower colour is green. |
has broader | Flower colour |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_colour_green |
pink
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_colour_pink |
description | Flower colour is pink. |
has broader | Flower colour |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_colour_pink |
red_brown
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_colour_red_brown |
description | Flower colour is red or brown. |
has broader | Flower colour |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_colour_red_brown |
white_cream
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_colour_white_cream |
description | Flower colour is white or cream. |
has broader | Flower colour |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_colour_white_cream |
yellow_orange
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_colour_yellow_orange |
description | Flower colour is yellow or orange. |
has broader | Flower colour |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_colour_yellow_orange |
grey
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_colour_grey |
description | Flower colour is grey. |
has broader | Flower colour |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_colour_grey |
black
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_colour_black |
description | Flower colour is black. |
has broader | Flower colour |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_colour_black |
Perianth colour
white
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/perianth_colour_white |
description | Perianth colour is white. |
has broader | Perianth colour |
is in scheme | https://w3id.org/APD/traits |
identifier | perianth_colour_white |
yellow
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/perianth_colour_yellow |
description | Perianth colour is yellow. |
has broader | Perianth colour |
is in scheme | https://w3id.org/APD/traits |
identifier | perianth_colour_yellow |
orange
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/perianth_colour_orange |
description | Perianth colour is orange. |
has broader | Perianth colour |
is in scheme | https://w3id.org/APD/traits |
identifier | perianth_colour_orange |
red
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/perianth_colour_red |
description | Perianth colour is red. |
has broader | Perianth colour |
is in scheme | https://w3id.org/APD/traits |
identifier | perianth_colour_red |
pink
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/perianth_colour_pink |
description | Perianth colour is pink. |
has broader | Perianth colour |
is in scheme | https://w3id.org/APD/traits |
identifier | perianth_colour_pink |
purple
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/perianth_colour_purple |
description | Perianth colour is purple. |
has broader | Perianth colour |
is in scheme | https://w3id.org/APD/traits |
identifier | perianth_colour_purple |
blue
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/perianth_colour_blue |
description | Perianth colour is blue. |
has broader | Perianth colour |
is in scheme | https://w3id.org/APD/traits |
identifier | perianth_colour_blue |
green
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/perianth_colour_green |
description | Perianth colour is green. |
has broader | Perianth colour |
is in scheme | https://w3id.org/APD/traits |
identifier | perianth_colour_green |
grey
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/perianth_colour_grey |
description | Perianth colour is grey. |
has broader | Perianth colour |
is in scheme | https://w3id.org/APD/traits |
identifier | perianth_colour_grey |
brown
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/perianth_colour_brown |
description | Perianth colour is brown. |
has broader | Perianth colour |
is in scheme | https://w3id.org/APD/traits |
identifier | perianth_colour_brown |
black
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/perianth_colour_black |
description | Perianth colour is black. |
has broader | Perianth colour |
is in scheme | https://w3id.org/APD/traits |
identifier | perianth_colour_black |
Floral orientation
up
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_orientation_up |
description | Flower orientation is vertical, with the floral entrance pointing up. |
has broader | Floral orientation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_orientation_up |
lateral
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_orientation_lateral |
description | Flower orientation is horizontal, with the floral entrance perpendicular to main vertical axis. |
has broader | Floral orientation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_orientation_lateral |
down
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_orientation_down |
description | Flower orientation is pendant, with the floral entrance pointing down. |
has broader | Floral orientation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_orientation_down |
mixed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_orientation_mixed |
description | Flower orientation is mixed, with different flowers exhibiting different orientations. |
has broader | Floral orientation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_orientation_mixed |
Filament presence and shape
absent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_filament_absent |
description | No filaments present |
has broader | Filament presence and shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_filament_absent |
present_general
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_filament_present_general |
description | Filaments present, with no specific defining characteristics. |
has broader | Filament presence and shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_filament_present_general |
long_and_narrow
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_filament_long_and_narrow |
description | Filaments have a long and narrow shape. (Synonyms, filiform, slender) |
has broader | Filament presence and shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_filament_long_and_narrow |
short_and_narrow
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_filament_short_and_narrow |
description | Filaments have a short and narrow shape; subsessile anthers. |
has broader | Filament presence and shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_filament_short_and_narrow |
long_and_wide
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_filament_long_and_wide |
description | Filaments have a long and wide laminar shape. |
has broader | Filament presence and shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_filament_long_and_wide |
short_and_wide
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_filament_short_and_wide |
description | Filaments have a short and wide laminar shape. |
has broader | Filament presence and shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_filament_short_and_wide |
long_and_very_wide
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_filament_long_and_very_wide |
description | Filaments have a long and very wide shape; for instance, the petal-like (outer) stamens of Nymphaea. |
has broader | Filament presence and shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_filament_long_and_very_wide |
petaloid
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_filament_petaloid |
description | Filaments are long and wide and colorful, e.g. Canna. |
has broader | Filament presence and shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_filament_petaloid |
fused_into_synandrium
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_filament_fused_into_synandrium |
description | Filament structure formed when stamens fused together. |
has broader | Filament presence and shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_filament_fused_into_synandrium |
fused_into_fascicle_stalks
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_filament_fused_into_fascicle_stalks |
description | Special case where the stamens are fused into the stalk of a fascicle of flowers. |
has broader | Filament presence and shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_filament_fused_into_fascicle_stalks |
long_and_narrow_divided_in_two
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_filament_long_and_narrow_divided_in_two |
description | Filaments have a long and narrow shape that is divided in two; e.g. Adoxa. |
has broader | Filament presence and shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_filament_long_and_narrow_divided_in_two |
short_general
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_filament_short_general |
description | Filament is short relative to the anther. |
has broader | Filament presence and shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_filament_short_general |
Gynoecium phyllotaxis
one_whorl
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_gynoecium_phyllotaxis_one_whorl |
description | Flowers with a single whorl of carpels. |
has broader | Gynoecium phyllotaxis |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_gynoecium_phyllotaxis_one_whorl |
two_or_more_whorls
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_gynoecium_phyllotaxis_two_or_more_whorls |
description | Flowers with two or more whorls of carpels. |
has broader | Gynoecium phyllotaxis |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_gynoecium_phyllotaxis_two_or_more_whorls |
spiral
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_gynoecium_phyllotaxis_spiral |
description | Flowers with carpels in a spiral arrangement. |
has broader | Gynoecium phyllotaxis |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_gynoecium_phyllotaxis_spiral |
Placentation
axile
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_gynoecium_placentation_axile |
description | Ovules are placed in the angle between carpel flanks in the center of the ovary; in syncarpous gynoecia. |
has broader | Placentation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_gynoecium_placentation_axile |
apical
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_gynoecium_placentation_apical |
description | Ovules attach at the top of the ovary; pendulous; in syncarpous gynoecia and apocarpous and unicarpellate gynoecia. |
has broader | Placentation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_gynoecium_placentation_apical |
basal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_gynoecium_placentation_basal |
description | Ovules attach at the base of the ovary; in syncarpous gynoecia and apocarpous and unicarpellate gynoecia. |
has broader | Placentation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_gynoecium_placentation_basal |
parietal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_gynoecium_placentation_parietal |
description | Ovules attach to the ovary wall where two carpels meet; in syncarpous gynoecia. |
has broader | Placentation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_gynoecium_placentation_parietal |
marginal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_gynoecium_placentation_marginal |
description | Ovules attach along the ventral slit; in apocarpous and unicarpellate gynoecia. |
has broader | Placentation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_gynoecium_placentation_marginal |
free_central
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_gynoecium_placentation_free_central |
description | Ovules are attached to a central column that emerges from the base of the ovary and protrudes into the non-septate ovary; in syncarpous gynoecia. |
has broader | Placentation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_gynoecium_placentation_free_central |
laminar
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_gynoecium_placentation_laminar |
description | When there is more than one series of ovules at the flanks of a carpel; in syncarpous gynoecia and apocarpous and unicarpellate gynoecia. |
has broader | Placentation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_gynoecium_placentation_laminar |
Ovary position
inferior
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_ovary_position_inferior |
description | Flower with inferior ovary, where the ovary is embedded in the receptacle and therefore located below the insertion level of the remaining floral organs. |
has broader | Ovary position |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_ovary_position_inferior |
superior
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_ovary_position_superior |
description | Flower with superior ovary, where the ovary is positioned above the insertion level of the remaining floral organs. |
has broader | Ovary position |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_ovary_position_superior |
half_inferior
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_ovary_position_half_inferior |
description | Flower where the receptacle is surrounded by the ovary to its mid-level. |
has broader | Ovary position |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_ovary_position_half_inferior |
one_quarter_inferior
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_ovary_position_one_quarter_inferior |
description | Flower where the receptacle surrounds up to one quarter of the ovary. |
has broader | Ovary position |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_ovary_position_one_quarter_inferior |
three_quarters_inferior
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_ovary_position_three_quarters_inferior |
description | Flower where the receptacle surrounds more than three quarters of the ovary. |
has broader | Ovary position |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_ovary_position_three_quarters_inferior |
Perianth differentiation
undifferentiated
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_differentiation_undifferentiated |
description | Flower were all tepals are alike, including flowers with a single, undifferentiated whorl. |
has broader | Perianth differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_differentiation_undifferentiated |
marked_differentiation_outer_sepaloid_inner_petaloid
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_differentiation_marked_differentiation_outer_sepaloid_inner_petaloid |
description | A typical flower with a distinct calyx and corolla. |
has broader | Perianth differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_differentiation_marked_differentiation_outer_sepaloid_inner_petaloid |
marked_differentiation_among_petaloid_tepals
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_differentiation_marked_differentiation_among_petaloid_tepals |
description | A flower with tepals that all resemble petals, but with marked differentiation between whorls of tepals. |
has broader | Perianth differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_differentiation_marked_differentiation_among_petaloid_tepals |
marked_differentiation_among_sepaloid_tepals
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_differentiation_marked_differentiation_among_sepaloid_tepals |
description | A flower with tepals that all resemble sepals, but with marked differentiation between whorls of tepals. |
has broader | Perianth differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_differentiation_marked_differentiation_among_sepaloid_tepals |
marked_differentiation
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_differentiation_marked_differentiation |
description | A flower with marked differentiation between whorls, but without an indication if the perianth whorls are petals, sepals, or tepals. |
has broader | Perianth differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_differentiation_marked_differentiation |
continuous_differentiation_outer_sepaloid_inner_petaloid
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_differentiation_continuous_differentiation_outer_sepaloid_inner_petaloid |
description | A flower with multiple whorls, where there is continuous differentiation between the outer sepaloid parts and the inner petaloid parts. |
has broader | Perianth differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_differentiation_continuous_differentiation_outer_sepaloid_inner_petaloid |
continuous_differentiation_among_petaloid_tepals
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_differentiation_continuous_differentiation_among_petaloid_tepals |
description | A flower with series of tepals that all resemble petals, which display continuous, gradual differentiation between whorls. |
has broader | Perianth differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_differentiation_continuous_differentiation_among_petaloid_tepals |
continuous_differentiation_among_sepaloid_tepals
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_differentiation_continuous_differentiation_among_sepaloid_tepals |
description | A flower with series of tepals that all resemble sepals, which display continuous, gradual differentiation between whorls. |
has broader | Perianth differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_differentiation_continuous_differentiation_among_sepaloid_tepals |
weak_differentiation
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_differentiation_weak_differentiation |
description | A flower with weak between whorls, but without an indication if the perianth whorls are petals, sepals, or tepals. |
has broader | Perianth differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_differentiation_weak_differentiation |
very_weak_differentiation
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_differentiation_very_weak_differentiation |
description | A flower with very weak between whorls, but without an indication if the perianth whorls are petals, sepals, or tepals. |
has broader | Perianth differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_differentiation_very_weak_differentiation |
Perianth phyllotaxis
irregular
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_phyllotaxis_irregular |
description | Perianth parts lacking any symmetrical organisation. |
has broader | Perianth phyllotaxis |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_phyllotaxis_irregular |
spiral
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_phyllotaxis_spiral |
description | Perianth parts organised along a continuous spiral, usually with wide divergence angles more or less equal to 137.5 degrees, the Fibonacci ‘golden angle’. |
has broader | Perianth phyllotaxis |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_phyllotaxis_spiral |
whorled
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_phyllotaxis_whorled |
description | Perianth parts organised in one or more whorls. |
has broader | Perianth phyllotaxis |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_phyllotaxis_whorled |
Symmetry of perianth
actinomorphic_general
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_symmetry_actinomorphic_general |
description | Perianth displaying radial symmetry. |
has broader | Symmetry of perianth |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_symmetry_actinomorphic_general |
actinomorphic_rotational
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_symmetry_actinomorphic_rotational |
description | Perianth that can be equally divided into three or more identical sections that, when rotated around the center of the flower by some number of degrees, exactly match each other in orientation and shape. |
has broader | Symmetry of perianth |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_symmetry_actinomorphic_rotational |
actinomorphic_strictly_polysymmetric
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_symmetry_actinomorphic_strictly_polysymmetric |
description | Polysymmetry, with three or more planes of bilateral symmetry. |
has broader | Symmetry of perianth |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_symmetry_actinomorphic_strictly_polysymmetric |
actinomorphic_spiral
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_symmetry_actinomorphic_spiral |
description | Perianth lacking a distinct plane of symmetry because their perianth parts are spirally arranged. |
has broader | Symmetry of perianth |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_symmetry_actinomorphic_spiral |
asymmetric
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_symmetry_asymmetric |
description | Perianth lacking any planes of symmetry. |
has broader | Symmetry of perianth |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_symmetry_asymmetric |
disymmetric
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_symmetry_disymmetric |
description | Perianth with two orthogonal planes of bilateral symmetry. |
has broader | Symmetry of perianth |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_symmetry_disymmetric |
zygomorphic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_perianth_symmetry_zygomorphic |
description | Monosymmetric, with a single plane of bilateral symmetry. |
has broader | Symmetry of perianth |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_perianth_symmetry_zygomorphic |
Pollen grain aperture shape
absent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_pollen_aperture_shape_absent |
description | Pollen that lacks an aperture. |
has broader | Pollen grain aperture shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_pollen_aperture_shape_absent |
colporus
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_pollen_aperture_shape_colporus |
description | Pollen aperture shape that combines the groove of colpate and the pore of porate apertures. |
has broader | Pollen grain aperture shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_pollen_aperture_shape_colporus |
colpus
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_pollen_aperture_shape_colpus |
description | Pollen aperture shape is elongate and grooved and may be positioned globally or equatorially. |
has broader | Pollen grain aperture shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_pollen_aperture_shape_colpus |
pore
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_pollen_aperture_shape_pore |
description | Pollen aperture shape is round and pore-like and may be positioned globally or equatorially. |
has broader | Pollen grain aperture shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_pollen_aperture_shape_pore |
ring_like
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_pollen_aperture_shape_ring_like |
description | Aperture that completely encircles the pollen. |
has broader | Pollen grain aperture shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_pollen_aperture_shape_ring_like |
spiraperturate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_pollen_aperture_shape_spiraperturate |
description | Pollen grain with one or more spiral apertures. |
has broader | Pollen grain aperture shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_pollen_aperture_shape_spiraperturate |
sulcus
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_pollen_aperture_shape_sulcus |
description | Pollen aperture shape is elongate and grooved and positioned at the pole. |
has broader | Pollen grain aperture shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_pollen_aperture_shape_sulcus |
syncolpus
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_pollen_aperture_shape_syncolpus |
description | Pollen grain with two or more simple (or compound) colpi, the ends of which join at the pole. |
has broader | Pollen grain aperture shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_pollen_aperture_shape_syncolpus |
ulcus
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_pollen_aperture_shape_ulcus |
description | Pollen aperture shape is round and pore-like and positioned at the pole. |
has broader | Pollen grain aperture shape |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_pollen_aperture_shape_ulcus |
Floral structural sex
bisexual
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_structural_sex_type_bisexual |
description | Hermaphrodite; flowers with both male and female reproductive organs. |
has broader | Floral structural sex |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_structural_sex_type_bisexual |
incompletely_unisexual
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_structural_sex_type_incompletely_unisexual |
description | Male flowers with pistillodes and/or female flowers with staminodes. |
has broader | Floral structural sex |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_structural_sex_type_incompletely_unisexual |
unisexual
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_structural_sex_type_unisexual |
description | Flowers with either male or female reproductive organs. |
has broader | Floral structural sex |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_structural_sex_type_unisexual |
Style differentiation
absent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_style_differentiation_absent |
description | Stigma sessile. |
has broader | Style differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_style_differentiation_absent |
present_length_and_shape_unknown
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_style_differentiation_present_length_and_shape_unknown |
description | Style present but shape unknown. |
has broader | Style differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_style_differentiation_present_length_and_shape_unknown |
present_short_and_thick
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_style_differentiation_present_short_and_thick |
description | Style present, and short and thick. |
has broader | Style differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_style_differentiation_present_short_and_thick |
present_short_and_narrow
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_style_differentiation_present_short_and_narrow |
description | Style present, and short and narrow, including short filiform styles. |
has broader | Style differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_style_differentiation_present_short_and_narrow |
present_long_and_wide
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_style_differentiation_present_long_and_wide |
description | Style present, and long and wide. |
has broader | Style differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_style_differentiation_present_long_and_wide |
present_long_and_narrow
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_style_differentiation_present_long_and_narrow |
description | Style present, and long and narrow, including long filiform styles. |
has broader | Style differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_style_differentiation_present_long_and_narrow |
present_petaloid
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_style_differentiation_present_petaloid |
description | Style present and petaloid. |
has broader | Style differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_style_differentiation_present_petaloid |
continuous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flower_style_differentiation_continuous |
description | When the style is an apical extension of carpel with decurrent stigma. |
has broader | Style differentiation |
is in scheme | https://w3id.org/APD/traits |
identifier | flower_style_differentiation_continuous |
Fruit type
achene
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_achene |
description | A simple, dry, indehiscent fruit with a single seed that is attached to the pericarp at one point only. (Synonyms, cypsela) |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_achene |
anthocarp
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_anthocarp |
description | A ripened ovary surrounded by attached accessory floral tissues; the floral tissues may be fleshy or dry. (Synonyms, accessory_fruit, pseudocarp, diclesium) |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_anthocarp |
berry
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_berry |
description | A simple, indehiscent fruit with one to many seeds embedded in a fleshy pericarp. |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_berry |
capsule
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_capsule |
description | A dry, dehiscent fruit composed of two or more united carpels; different types of capsules distinguished by type of dehiscence (e.g. valves, slits, pores). |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_capsule |
caryopsis
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_caryopsis |
description | A simple, dry, indehiscent fruit with a single seed which is fused to the pericarp at one point only; the fruit type of all Poaceae (Synonyms, grain) |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_caryopsis |
compound_fruit_other
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_compound_fruit_other |
description | A fruit derived from more than one flower. (Synonyms, aggregate_fruit) |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_compound_fruit_other |
drupe
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_drupe |
description | A simple indehiscent fruit with a hard, stony endocarp and a fleshy mesocarp. |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_drupe |
follicle
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_follicle |
description | A dry, dehiscent fruit derived from a single carpel that splits along one suture. |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_follicle |
legume
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_legume |
description | A dry, dehiscent fruit derived from a single carpel that splits along two sutures; applies to Fabaceae. (Synonyms, pod) |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_legume |
legume_indehiscent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_legume_indehiscent |
description | A dry, indehiscent fruit derived from a single carpel; applies to Fabaceae. |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_legume_indehiscent |
mericarp
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_mericarp |
description | A fruitlet (seed-containing portion of a fruit) that is a half-carpel; the individual fruitlets separate from one another at maturity; a specific type of schizocarp. (In some datasets, term likely refers to any fruitlet derived from a portion of a schizocarp that separates at maturity, not explicitly just a half-carpel.) |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_mericarp |
multiple_fruit
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_multiple_fruit |
description | A fruit composed of several fruitlets developing from a single flower (e.g. raspberries, magnolias); fruits developing from more than one flower are included under compound (aggregate) fruits. (Synonym, apocarp) |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_multiple_fruit |
nut
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_nut |
description | A simple, dry, indehiscent fruit with a single seed and a hard pericarp. |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_nut |
nutlet
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_nutlet |
description | A diminutive of nut, referring to a simple, dry, indehiscent structure with a single seed that might be an entire fruit (nut; monocarp) or a portion of a fruit, such as the individual components derived from an apocarp (fruit with multiple unfused ovaries) or schizocarp (fruit with multiple ovaries that separate at maturity). |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_nutlet |
pepo
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_pepo |
description | A fleshy fruit derived from a single ovary that is divided into several carpels, has multiple seeds, and has a tough rind when mature. |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_pepo |
pome
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_pome |
description | A fleshy fruit with the bulk of the fleshy tissue derived from flora tissue that surrounds the inferior ovary. |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_pome |
pyrene
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_pyrene |
description | A fleshy fruit in which the seed(s) are covered by a hard layer of endocarp. |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_pyrene |
samara
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_samara |
description | A winged, dry fruit. |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_samara |
schizocarp
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_schizocarp |
description | Category that includes all fruits derived from a compound pistil that separate into individual carpellary constituents at maturity; broad terms that includes dry and fleshy fruits, some with accessory tissues, others without. The individual seed-containing units that a schizocarp breaks apart into include mericarps, nutlets, and fruitlets. |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_schizocarp |
silique
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_silique |
description | A type of capsule (dry, dehiscent fruit) where the fruit is divided into two parts by a thin partition; more than three times as long as wide; applies to Brassicaceae (Synonyms, silicle, siliqua) |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_silique |
strobilus
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_strobilus |
description | A modified reproductive shoot system found in many nonflowering plants, especially gymnosperms, comprised of overlapping bracts (scales). (Synonyms, cone) |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_strobilus |
syncarp
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_syncarp |
description | A compound fruit produced by the adhesion of the fruits from several flowers. |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_syncarp |
syconium
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_syconium |
description | A fleshy compound fruit, in which the fruitlets are enclosed in accessory material, such as the hollow-centered fruits of Moraceae. (Synonyms, synconium, fig) |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_syconium |
utricle
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_type_utricle |
description | A bladdery or inflated dry fruit with a single seed; essential an achene in which the pericarp is significantly larger than the mature seed. |
has broader | Fruit type |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_type_utricle |
Fruit fleshiness
dry
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_fleshiness_dry |
description | Fruits are dry when mature and fresh. |
has broader | Fruit fleshiness |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_fleshiness_dry |
fleshy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_fleshiness_fleshy |
description | Fruits are fleshy when mature and fresh. |
has broader | Fruit fleshiness |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_fleshiness_fleshy |
Fruit dehiscence
dehiscent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_dehiscence_dehiscent |
description | Fruits are dehiscent when mature. |
has broader | Fruit dehiscence |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_dehiscence_dehiscent |
indehiscent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_dehiscence_indehiscent |
description | Fruits are indehiscent when mature. |
has broader | Fruit dehiscence |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_dehiscence_indehiscent |
Fruit colour
pink
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_colour_pink |
description | Fruit’s exocarp is pink. |
has broader | Fruit colour |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_colour_pink |
red
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_colour_red |
description | Fruit’s exocarp is red. |
has broader | Fruit colour |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_colour_red |
orange
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_colour_orange |
description | Fruit’s exocarp is orange. |
has broader | Fruit colour |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_colour_orange |
yellow
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_colour_yellow |
description | Fruit’s exocarp is yellow. |
has broader | Fruit colour |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_colour_yellow |
green
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_colour_green |
description | Fruit’s exocarp is green. |
has broader | Fruit colour |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_colour_green |
blue
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_colour_blue |
description | Fruit’s exocarp is blue. |
has broader | Fruit colour |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_colour_blue |
purple
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_colour_purple |
description | Fruit’s exocarp is purple. |
has broader | Fruit colour |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_colour_purple |
white
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_colour_white |
description | Fruit’s exocarp is white. |
has broader | Fruit colour |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_colour_white |
cream
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_colour_cream |
description | Fruit’s exocarp is cream. |
has broader | Fruit colour |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_colour_cream |
brown
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_colour_brown |
description | Fruit’s exocarp is brown. |
has broader | Fruit colour |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_colour_brown |
black
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_colour_black |
description | Fruit’s exocarp is black. |
has broader | Fruit colour |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_colour_black |
grey
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_colour_grey |
description | Fruit’s exocarp is grey. |
has broader | Fruit colour |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_colour_grey |
Fruit surface hairiness
glabrous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_surface_hairs_glabrous |
description | Mature fruit do not have hairs (trichomes). |
has broader | Fruit surface hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_surface_hairs_glabrous |
hairy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fruit_surface_hairs_hairy |
description | Mature fruit have hairs (trichomes). |
has broader | Fruit surface hairiness |
is in scheme | https://w3id.org/APD/traits |
identifier | fruit_surface_hairs_hairy |
Seed shape
comma-shaped
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_comma-shaped |
description | A seed displaying a single arc of curvature, such that it bilaterally symmetrical. (Synonyms, comma-shaped, falcate, sickle-shaped scimitar-shaped) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_comma-shaped |
conical
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_conical |
description | Cone-shaped, with a broad flat base and narrow apex; turbinate refers to the inverse shape. (Synonyms, obconical, cone-shaped, turbinate, top-shaped) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_conical |
cuneate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_cuneate |
description | A 3-dimensional shape that is wedge-shaped or boat-shaped. |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_cuneate |
cylindrical
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_cylindrical |
description | A cylinder, a shape with a flat top and bottom that are circular or elliptical in outline and are linked by a curved surface. (Synonyms, terete) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_cylindrical |
discoid
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_discoid |
description | A subset of cylinder, a shape with a flat, circular or elliptical top and bottom, linked by a curved surface, where the length of the curved surface is much shorter than the cross-section of the flat surfaces. (Synonyms, flat) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_discoid |
ellipsoid
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_ellipsoid |
description | A 3-dimensional shape that is elliptic in long section and circular in cross section; length:width ratio between 2:1 and 3:2. (Synonyms, obloid, oblong) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_ellipsoid |
ellipsoid_flattened
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_ellipsoid_flattened |
description | A 3-dimensional shape that is elliptic in long section and and laterally compressed/flattened such that it is non-circular in cross section; length:width ratio between 2:1 and 3:2. |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_ellipsoid_flattened |
fusiform
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_fusiform |
description | Spindle-shaped; A 3-dimension shape that is narrowly ellipsoid, circular in cross-section and tapering sharply toward both ends. (Synonyms, spindle-shaped) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_fusiform |
globoid
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_globoid |
description | A 3-dimensional shape that is circular in both long section and cross section. (Synonyms, globose, globular, spherical) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_globoid |
globoid_flattened
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_globoid_flattened |
description | A 3-dimensional shape that is circular in both long section and somewhat flattened such that it is non-circular in cross section. |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_globoid_flattened |
hemispheric
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_hemispheric |
description | Half a sphere or globe, with a flat base, domed top, and circular in cross-section. (Synonyms, convex) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_hemispheric |
hemispheric_flattened
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_hemispheric_flattened |
description | A 3-dimensional shape that is a laterally compressed/flattened half-sphere or globe; shape has a flat base, a domed top, and is elliptical in cross-section. |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_hemispheric_flattened |
lenticular
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_lenticular |
description | Shaped like a biconvex lens and circular in cross section; shaped like a lentil. |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_lenticular |
orbicular
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_orbicular |
description | A poorly defined term that remains in AusTraits only as a placeholder; it appears to be used as both globoid (spherical) and lenticular by different authors. |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_orbicular |
ovoid
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_ovoid |
description | A 3-dimensional shape that is egg-shaped in long section and circular in cross section. Term as used in AusTraits includes variants on egg-shaped including pyriform (pear-shaped) and obovoid (inversely egg-shaped) (Synonyms, pyriform, obovoid) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_ovoid |
ovoid_elongated
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_ovoid_elongated |
description | A 3-dimensional shape that is egg-shaped in long section and circular in cross section, where the length dimension is much longer than the width/height dimensions. Term as used in AusTraits includes specific shapes club-shaped (clavate/obclavate) and tear-shaped (lachrimiform). (Synonyms, lachrimiform, tear-shaped, lachrymiform, clavate; obclavate, club-shaped) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_ovoid_elongated |
ovoid_flattened
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_ovoid_flattened |
description | A 3-dimensional shape that is egg-shaped in long section and laterally compressed/flattened such that is non-circular in cross section. |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_ovoid_flattened |
polyhedral
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_polyhedral |
description | A 3-dimensional shape with distinct, fairly flat faces and edges; includes prisms and tetrahedral shaped seeds. (Synonyms, rhomboid, prismatic, pyramidal, rectangular, square) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_polyhedral |
polyhedral_elongated
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_polyhedral_elongated |
description | A 3-dimensional shape with distinct, fairly flat faces and edges, where the length dimension is much longer than the width/height dimensions; includes elongate prisms and elongate tetrahedral shaped seeds. |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_polyhedral_elongated |
polyhedral_inflated
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_polyhedral_inflated |
description | A 3-dimensional shape with distinct faces and edges but the faces tend to bulge outwards. |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_polyhedral_inflated |
reniform
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_reniform |
description | Having a cross-section that is roughly circular with a notch; strictly a kidney-shape but the definition applied here includes heart-shaped seeds and other seeds with a distinct notch. (Synonyms, cordiform, kidney-shaped, heart-shaped) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_reniform |
winged
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_winged |
description | A seed with wings. (Synonyms, samara) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_winged |
sectoroid
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_sectoroid |
description | Shaped like an orange segment or wedge of a sphere. (Synonyms, wedge-shaped) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_sectoroid |
sinusoidal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_shape_sinusoidal |
description | A seed with two arcs of curvature or a single arc, such that it lacks an axis of symmetry. (Synonyms, sigmoidal) |
has broader | Seed shape |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_shape_sinusoidal |
Seed surface hairs
glabrous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_hairs_glabrous |
description | Seed surface lacks trichomes or bristles. |
has broader | Seed surface hairs |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_hairs_glabrous |
hairs
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_hairs_hairs |
description | Seed surface with trichomes or bristles. |
has broader | Seed surface hairs |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_hairs_hairs |
hairs_branched
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_hairs_hairs_branched |
description | Seed surface with branched trichomes or bristles.(Synonyms, stellate, plumose) |
has broader | Seed surface hairs |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_hairs_hairs_branched |
hairs_simple
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_hairs_hairs_simple |
description | Seed surface with simple trichomes or bristles. (Synonyms, tomentose, velutinous, velvety, sericeous) |
has broader | Seed surface hairs |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_hairs_hairs_simple |
Seed surface texture
bumpy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_texture_bumpy |
description | Seed surface covered with minute, rounded protuberances. (Synonyms, colliculate, verrucate, papillate, tuberculate, undulate) |
has broader | Seed surface texture |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_texture_bumpy |
grooved
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_texture_grooved |
description | Seed surface covered with grooves. |
has broader | Seed surface texture |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_texture_grooved |
netted
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_texture_netted |
description | Seed surface covered with raised, reticulate, interconnected ridges. (Synonyms, reticulate, honey-combed) |
has broader | Seed surface texture |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_texture_netted |
papery
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_texture_papery |
description | Seed surface with a thin and papery texture. (Synonyms, chartaceous) |
has broader | Seed surface texture |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_texture_papery |
pitted
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_texture_pitted |
description | Seed surface pitted. (Synonyms, foveolate, foveate, dimpled, punctate, lacunose) |
has broader | Seed surface texture |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_texture_pitted |
ribbed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_texture_ribbed |
description | Seed surface with longitudinal raised ribs or ridges. (Synonyms, costate, carinate, lineate, fluted, striate, strigose, lineolate, scalariform, ridged) |
has broader | Seed surface texture |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_texture_ribbed |
rough
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_texture_rough |
description | Seed surface rough with no organisation of markings, resembling sandpaper. (Synonyms, scabrous) |
has broader | Seed surface texture |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_texture_rough |
scaly
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_texture_scaly |
description | Seed surface rough with loose scales differing in direction or not parallel in direction. (Synonyms, scurfy, squarrose) |
has broader | Seed surface texture |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_texture_scaly |
smooth
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_texture_smooth |
description | Seed surface smooth, lacking texture. (Synonym, glabrous) |
has broader | Seed surface texture |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_texture_smooth |
spiny
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_texture_spiny |
description | Seed surface with spines. (Synonyms, echinulate) |
has broader | Seed surface texture |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_texture_spiny |
wrinkled
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_texture_wrinkled |
description | Seed surface with a wrinkled, rugose texture. (Synonyms, rugose, rugulose, bullate) |
has broader | Seed surface texture |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_texture_wrinkled |
Seed surface reflectivity
dull
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_reflectivity_dull |
description | Seed surface appears dull, indicating it has a low reflectivity. |
has broader | Seed surface reflectivity |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_reflectivity_dull |
shiny
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_surface_reflectivity_shiny |
description | Seed surface appears shiny or glossy, indicating it has a high reflectivity. (Synonyms, glossy, lustrous, polished) |
has broader | Seed surface reflectivity |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_surface_reflectivity_shiny |
Diaspore fleshiness
dry
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/diaspore_fleshiness_dry |
description | Diaspores where the true fruit, accessory tissues and dispersal appendages are all dry when mature. |
has broader | Diaspore fleshiness |
is in scheme | https://w3id.org/APD/traits |
identifier | diaspore_fleshiness_dry |
fleshy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/diaspore_fleshiness_fleshy |
description | Diaspores where either the true fruit, accessory tissues or dispersal appendages are fleshy when mature. |
has broader | Diaspore fleshiness |
is in scheme | https://w3id.org/APD/traits |
identifier | diaspore_fleshiness_fleshy |
Dispersal appendage
aril
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_aril |
description | Fleshy outgrowth of a seed, that often attracts animals like birds or ants. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_aril |
bristles
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_bristles |
description | Bristle-like projections. Trait value includes awns, which are slender, bristle-like projections in some grasses. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_bristles |
bracts_and_glumes
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_bracts_and_glumes |
description | When the bracts below the inflorescence are persistent and functional as dispersal appendages. This includes persistent glumes, the modified membranous bracts in the family Poaceae that surround the spikelet of a grass. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_bracts_and_glumes |
elaiosome
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_elaiosome |
description | Fleshy (often fatty) appendage on seeds that attracts ants. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_elaiosome |
fleshy_reward
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_fleshy_reward |
description | Broad term that includes a suite of appendages that provides a fleshy reward to attract dispersers; highest level of resolution available for some studies. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_fleshy_reward |
floating_seed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_floating_seed |
description | Seed that is dispersed by floating on water. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_floating_seed |
flotation_scales
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_flotation_scales |
description | Scales enhancing flotation, thereby assisting with dispersal. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_flotation_scales |
floral_parts
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_floral_parts |
description | When some plant floral parts (the petals, sepals, or style) are persistent and aid in seed and fruit dispersal. This is a broad term not explicitly suggesting a dispersal mechanism. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_floral_parts |
hairs
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_hairs |
description | Modified hairs that aid in seed dispersal. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_hairs |
hooks
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_hooks |
description | A rear-facing point, as in a fish hook that aids in seed and fruit dispersal. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_hooks |
inflated_parts
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_inflated_parts |
description | When some part of the seed, fruit, or associated tissues is inflated, aiding in seed or fruit dispersal. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_inflated_parts |
none
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_none |
description | When a fruit and associated tissues lack any dispersal appendages. Includes exarillate and taxa with explicitly deciduous pappus. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_none |
pappus
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_pappus |
description | The calyx in Asteraceae that has been modified into bristles, hairs, scales or awns that are attached to the apex of the fruit. Taxa assigned this trait value have a persistent pappus that aids in dispersal, often, but not exclusively through wind dispersal. The pappus can also assist with flotation. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_pappus |
plumose
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_plumose |
description | Fruit, seed, style, or other floral component that is plumose and assists with dispersal. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_plumose |
receptacle
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_receptacle |
description | Fleshy receptacle that aids in dispersal. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_receptacle |
sarcotesta
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_sarcotesta |
description | Fleshy seed coat that aids in dispersal. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_sarcotesta |
spines
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_spines |
description | Spines that aid in dispersal. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_spines |
tumbleweed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_tumbleweed |
description | Plant growth form, whereby the aboveground plant component detaches from the roots and is readily rolled by wind across the ground, aiding in dispersal. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_tumbleweed |
wings
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_wings |
description | Referring to wing-like seed extensions that aid in wind dispersal. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_wings |
wing_or_plume
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_appendage_wing_or_plume |
description | Broad term that includes a suite of appendages that aid in wind dispersal; highest level of resolution available for some studies. |
has broader | Dispersal appendage |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_appendage_wing_or_plume |
Dispersal unit
fruit
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_unit_fruit |
description | Dispersal unit is a fruit. |
has broader | Dispersal unit |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_unit_fruit |
seed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_unit_seed |
description | Dispersal unit is a seed. |
has broader | Dispersal unit |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_unit_seed |
spore
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_unit_spore |
description | Dispersal unit is a spore. |
has broader | Dispersal unit |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_unit_spore |
seedling
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_unit_seedling |
description | Dispersal unit is a seedling. (Synonyms, viviparous) |
has broader | Dispersal unit |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_unit_seedling |
Seed colour
blue_purple
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_colour_blue_purple |
description | Seed coat is pink. |
has broader | Seed colour |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_colour_blue_purple |
green
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_colour_green |
description | Seed coat is red. |
has broader | Seed colour |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_colour_green |
pink
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_colour_pink |
description | Seed coat is orange. |
has broader | Seed colour |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_colour_pink |
red_brown
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_colour_red_brown |
description | Seed coat is yellow. |
has broader | Seed colour |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_colour_red_brown |
white_cream
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_colour_white_cream |
description | Seed coat is green. |
has broader | Seed colour |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_colour_white_cream |
yellow_orange
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_colour_yellow_orange |
description | Seed coat is blue. |
has broader | Seed colour |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_colour_yellow_orange |
grey
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_colour_grey |
description | Seed coat is purple. |
has broader | Seed colour |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_colour_grey |
black
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_colour_black |
description | Seed coat is white. |
has broader | Seed colour |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_colour_black |
Plant photosynthetic pathway
c3
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/photosynthetic_pathway_c3 |
description | Plant using the ‘standard’ photosynthetic pathway, where a 3-carbon compound is produced after the first stage in the photosynthetic pathway. |
has broader | Plant photosynthetic pathway |
is in scheme | https://w3id.org/APD/traits |
identifier | photosynthetic_pathway_c3 |
c4
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/photosynthetic_pathway_c4 |
description | Plants in which the photosynthetic light-dependent reactions and the Calvin cycle are physically separated to reduce photorespiration. |
has broader | Plant photosynthetic pathway |
is in scheme | https://w3id.org/APD/traits |
identifier | photosynthetic_pathway_c4 |
c3-c4
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/photosynthetic_pathway_c3-c4 |
description | Taxa that shift between C3 and C4 photosynthesis. |
has broader | Plant photosynthetic pathway |
is in scheme | https://w3id.org/APD/traits |
identifier | photosynthetic_pathway_c3-c4 |
cam
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/photosynthetic_pathway_cam |
description | Plants which display crassulacean acid metabolism. |
has broader | Plant photosynthetic pathway |
is in scheme | https://w3id.org/APD/traits |
identifier | photosynthetic_pathway_cam |
c3-cam
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/photosynthetic_pathway_c3-cam |
description | Taxa that shift between C3 and cam photosynthesis. |
has broader | Plant photosynthetic pathway |
is in scheme | https://w3id.org/APD/traits |
identifier | photosynthetic_pathway_c3-cam |
c4-cam
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/photosynthetic_pathway_c4-cam |
description | Taxa that shift between C4 and cam photosynthesis. |
has broader | Plant photosynthetic pathway |
is in scheme | https://w3id.org/APD/traits |
identifier | photosynthetic_pathway_c4-cam |
facultative_cam
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/photosynthetic_pathway_facultative_cam |
description | Species that shifts between C3 and CAM photosynthesis depending on water availability. |
has broader | Plant photosynthetic pathway |
is in scheme | https://w3id.org/APD/traits |
identifier | photosynthetic_pathway_facultative_cam |
unknown
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/photosynthetic_pathway_unknown |
description | Photosynthetic pathway is unknown. (This trait value should be used if the photosynthetic pathway is assessed but unknown, not to record a lack of data.) |
has broader | Plant photosynthetic pathway |
is in scheme | https://w3id.org/APD/traits |
identifier | photosynthetic_pathway_unknown |
Bark photosynthesis
non_photosynthetic_bark
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bark_photosynthetic_status_non_photosynthetic_bark |
description | Plant’s bark is not photosynthetic. |
has broader | Bark photosynthesis |
is in scheme | https://w3id.org/APD/traits |
identifier | bark_photosynthetic_status_non_photosynthetic_bark |
photosynthetic_bark
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bark_photosynthetic_status_photosynthetic_bark |
description | Plant’s bark is photosynthetic. |
has broader | Bark photosynthesis |
is in scheme | https://w3id.org/APD/traits |
identifier | bark_photosynthetic_status_photosynthetic_bark |
Plant growth form
herb
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_herb |
description | A seed-bearing plant which does not have a woody above-ground stem; when available this term has been divided into more detailed terms. (Synonyms, forb) |
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_herb |
subshrub
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_subshrub |
description | A plant that is only woody at the base, with the remainder of the stems regenerating yearly. This term is not meant to encompass short-lived plants that are only borderline woody. (Synonyms, suffrutescent) |
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_subshrub |
shrub
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_shrub |
description |
A woody plant that is distinguished by NOT being a tree, due to one of more of the following characteristics, 1) they are less than 8 metres in height; 2) if a plant community includes trees, the shrubs are shorter than the surrounding trees and not part of the canopy; 3) in comparison to trees, the leaves are more distributed along the entire trunk; 4) the plant has multiple relatively narrow stems arising at or near ground level. The definition of shrub is complex, as there are many single-stemmed shrubs within Australia and many taxa that are described in the taxonomic literature as a shrub or small tree.
|
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_shrub |
mallee
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_mallee |
description | Refers to Eucalyptus species which are small trees that form a large lignotuber. They have multiple stems arising at or near ground level and regenerate from the lignotuber following fire. |
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_mallee |
tree
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_tree |
description | A tall, woody, perennial plant, usually with a single main trunk, and its leaves predominantly elevated above the ground surface. |
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_tree |
graminoid
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_graminoid |
description |
Herbaceous plant with a grass-like morphology that is within the order Poales. Taxa both with and without a tussock form are mapped to this term. This term is most frequently applied to three large monocot families, Poaceae, Cyperaceae, and Juncaceae, but the term could apply to other taxa within Poales with a grass-like morphology, including narrow, linear leaves and non-showy flowers, including Restionaceae, Centrolepidaceae, Anarthriaceae, and Ecdeiocoleaceae. Taxa outside Poales with a grass-like morphology should be designated as herbs and also have the term tufted mapped to the trait stem_growth_habit .
|
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_graminoid |
tussock
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_tussock |
description | A subcategory of graminoid, which is a plant where many shoots from the basal meristem form prominent tufts. |
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_tussock |
graminoid_not_tussock
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_graminoid_not_tussock |
description | A subcategory of graminoid, indicating a plant which explicitly lacks a tussock morphology, with the leaves not growing in tufts. |
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_graminoid_not_tussock |
hummock
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_hummock |
description | Plant that grows as a dense mound up to 1 metre in height. The term generally applies only to species within the genera Triodia that form such mounds and these are considered a distinctive and uniquely Australian growth form. |
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_hummock |
basal_large
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_basal_large |
description | A plant whose leaves form a distinctly large basal tuft or rosette, including large acaulescent monocots and cycads. |
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_basal_large |
geophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_geophyte |
description | Subcategory of herb, specifically referring to plants that survive the winter/dry season as an organ (rhizome, bulb, corm, or tuber) buried in dry soil, with all leaves dying back each year. |
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_geophyte |
palmoid
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_palmoid |
description | Plant that bears a rosette-like canopy of typically large, often compound leaves atop a usually thick (pachycaulous), columnar, unbranched or little-branched stem. Palms, tree ferns, trunked cycads, trunked grass-trees, and Pandanus are mapped to this term. (Synonyms, rosette-tree, palm, grass-tree) |
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_palmoid |
climber
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_climber |
description | Plant that climbs up another plant’s stem or branches, rather than being able to support itself. Term used only if datasets do not specify if a climbing plant is herbaceous (a vine) or woody (a liana). |
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_climber |
climber_herbaceous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_climber_herbaceous |
description |
Herbaceous plant that climbs up another plant’s stem or branches, rather than being able to support itself. This is usually synonymous with vine . Types of climbers (scrambling, twining) are captured under the trait plant_climbing_mechanism . (Synonyms, vine)
|
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_climber_herbaceous |
climber_woody
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_climber_woody |
description |
Woody or thick-stemmed (>2 cm) plant that climbs up another plant’s stem or branches, rather than being able to support itself. This is usually synonymous with liana . Woody climbers generally use hooks, tendrils, and/or adventitious roots to climb; the climbing mechanisms used by a taxon are captured under the trait plant_climbing_mechanism . (Synonyms, liana)
|
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_climber_woody |
fern
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_fern |
description | A taxonomic grouping that includes acaulescent ferns; ferns are vascular plants that reproduce via spores and have neither seeds nor flowers. |
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_fern |
lycophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_form_lycophyte |
description | A taxonomic grouping that includes quillworts, clubmosses, and spike mosses. |
has broader | Plant growth form |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_form_lycophyte |
Life form
phanerophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_form_phanerophyte |
description | Plant whose perennating buds are on persistent shoots which rise at least 50 cm above the soil surface. These are normally woody perennials. |
has broader | Life form |
is in scheme | https://w3id.org/APD/traits |
identifier | life_form_phanerophyte |
chamaephyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_form_chamaephyte |
description | Plant whose perennating buds are on persistent shoots that do not extend more than 50 cm above the soil surface. These are normally woody perennials. |
has broader | Life form |
is in scheme | https://w3id.org/APD/traits |
identifier | life_form_chamaephyte |
hemicryptophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_form_hemicryptophyte |
description | Plant whose perennating buds are at or near the soil surface. |
has broader | Life form |
is in scheme | https://w3id.org/APD/traits |
identifier | life_form_hemicryptophyte |
cryptophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_form_cryptophyte |
description | Plant whose perennating buds are subterranean or under water. This grouping can be further divided into geophyte, helophyte, and hydrophyte. |
has broader | Life form |
is in scheme | https://w3id.org/APD/traits |
identifier | life_form_cryptophyte |
geophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_form_geophyte |
description | Plant that perennates as an organ (rhizome, bulb, corm, or tuber) buried in dry soil, with all leaves dying back each year; a subcategory of cryptophyte. |
has broader | Life form |
is in scheme | https://w3id.org/APD/traits |
identifier | life_form_geophyte |
helophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_form_helophyte |
description | Plant that perennates as an organ (rhizome, bulb, corm, or tuber) buried in marshy or wet soil or lying under water, with buds emerging during the growing season and shoots and leaves rising about the water surface; a subcategory of cryptophyte. (Synonyms, emergent_hydrophyte) |
has broader | Life form |
is in scheme | https://w3id.org/APD/traits |
identifier | life_form_helophyte |
hydrophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_form_hydrophyte |
description | Plant that perennates as buds or as an organ (rhizome, bulb, corm, or tuber) buried in marshy or wet soil or lying under water, with shoots emerging during the growing season that remain below or at the water surface; a subcategory of cryptophyte. |
has broader | Life form |
is in scheme | https://w3id.org/APD/traits |
identifier | life_form_hydrophyte |
therophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_form_therophyte |
description | Annual plants whose shoot and root systems die completely at the end of flowering and seed production, such that they survive the unfavourable cold or dry season in the form of seeds. |
has broader | Life form |
is in scheme | https://w3id.org/APD/traits |
identifier | life_form_therophyte |
epiphyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_form_epiphyte |
description | Plant that grows on the surface of another plant. |
has broader | Life form |
is in scheme | https://w3id.org/APD/traits |
identifier | life_form_epiphyte |
aerophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_form_aerophyte |
description | Plant that obtains moisture and nutrients from the air and rain, resting on other plants or the ground surface. |
has broader | Life form |
is in scheme | https://w3id.org/APD/traits |
identifier | life_form_aerophyte |
Life history
ephemeral
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_history_ephemeral |
description | A very short-lived plant, generally with a lifespan of only a few months and the exact length of lifespan quite variable and determined by environmental conditions. |
has broader | Life history |
is in scheme | https://w3id.org/APD/traits |
identifier | life_history_ephemeral |
annual
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_history_annual |
description | A plant that lives for up to one year after germinating, completing its life cycle in a single growing season. |
has broader | Life history |
is in scheme | https://w3id.org/APD/traits |
identifier | life_history_annual |
biennial
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_history_biennial |
description | A plant that lives for up to two years after germinating, requiring two growing seasons to complete its life cycle and dying following the second growing season. |
has broader | Life history |
is in scheme | https://w3id.org/APD/traits |
identifier | life_history_biennial |
perennial
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_history_perennial |
description | A plant that lives for three or more growing seasons, with an exact lifespan that is indeterminate. |
has broader | Life history |
is in scheme | https://w3id.org/APD/traits |
identifier | life_history_perennial |
short_lived_perennial
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_history_short_lived_perennial |
description | A perennial whose lifespan is less than approximately five years, with the exact lifespan generally dependent on environmental conditions. |
has broader | Life history |
is in scheme | https://w3id.org/APD/traits |
identifier | life_history_short_lived_perennial |
Ephemeral life history class
disturbance_ephemeral
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_history_ephemeral_class_disturbance_ephemeral |
description | Ephemeral plant the germinates and establishes following disturbance, but the type of disturbance is not specified. |
has broader | Ephemeral life history class |
is in scheme | https://w3id.org/APD/traits |
identifier | life_history_ephemeral_class_disturbance_ephemeral |
rain_ephemeral
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_history_ephemeral_class_rain_ephemeral |
description | Ephemeral plant that germinates and establishes following rain or flood events. |
has broader | Ephemeral life history class |
is in scheme | https://w3id.org/APD/traits |
identifier | life_history_ephemeral_class_rain_ephemeral |
fire_ephemeral
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_history_ephemeral_class_fire_ephemeral |
description | Ephemeral plant that germinates and establishes following fire, where it is unknown if the plant is an obligate or facultative fire ephemeral. |
has broader | Ephemeral life history class |
is in scheme | https://w3id.org/APD/traits |
identifier | life_history_ephemeral_class_fire_ephemeral |
fire_ephemeral_facultative
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_history_ephemeral_class_fire_ephemeral_facultative |
description | Ephemeral plant that increases its germination and establishment following fire, but can also germinate and establish without fire. |
has broader | Ephemeral life history class |
is in scheme | https://w3id.org/APD/traits |
identifier | life_history_ephemeral_class_fire_ephemeral_facultative |
fire_ephemeral_obligate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/life_history_ephemeral_class_fire_ephemeral_obligate |
description | Ephemeral plant that only germinates and establishes following fire. |
has broader | Ephemeral life history class |
is in scheme | https://w3id.org/APD/traits |
identifier | life_history_ephemeral_class_fire_ephemeral_obligate |
Plant growth substrate
epiphyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_substrate_epiphyte |
description | A plant that grows upon another plant. |
has broader | Plant growth substrate |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_substrate_epiphyte |
lithophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_substrate_lithophyte |
description | A plant that grows upon a rock. |
has broader | Plant growth substrate |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_substrate_lithophyte |
terrestrial
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_substrate_terrestrial |
description | A plant that grows on land, and generally referencing a plant that grows in soil. |
has broader | Plant growth substrate |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_substrate_terrestrial |
semiaquatic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_substrate_semiaquatic |
description | A plant that grows partially submerged in water or spends part of its life growing in water. |
has broader | Plant growth substrate |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_substrate_semiaquatic |
aquatic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_substrate_aquatic |
description | A plant that grows in water. |
has broader | Plant growth substrate |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_substrate_aquatic |
marine
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_substrate_marine |
description | A plant that grows in the sea. |
has broader | Plant growth substrate |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_substrate_marine |
hemiepiphyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_growth_substrate_hemiepiphyte |
description | A plant that spends part of its life cycle as an epiphyte, growing upon another plant. |
has broader | Plant growth substrate |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_growth_substrate_hemiepiphyte |
Plant photosynthetic organ
leaf
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_photosynthetic_organ_leaf |
description | A true leaf, including both laminar and needle-shaped leaves. |
has broader | Plant photosynthetic organ |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_photosynthetic_organ_leaf |
cladode
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_photosynthetic_organ_cladode |
description | A photosynthetic shoot, regardless of form, that functions as a leaf. For example, cacti pads and Casuarina articles. (Synonyms, article, phylloclade, cladophyll) |
has broader | Plant photosynthetic organ |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_photosynthetic_organ_cladode |
phyllode
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_photosynthetic_organ_phyllode |
description | A flattened bladelike petiole. (Synonyms, switch plant) |
has broader | Plant photosynthetic organ |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_photosynthetic_organ_phyllode |
non-photosynthetic_plant
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_photosynthetic_organ_non-photosynthetic_plant |
description | A plant that lacks any photosynthetic organs. |
has broader | Plant photosynthetic organ |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_photosynthetic_organ_non-photosynthetic_plant |
Plant alternative energy and nutrient acquisition strategies
saprophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_alternative_energy_and_nutrient_acquisition_strategy_saprophyte |
description | Plant that acquires nutrients from decaying biomass. |
has broader | Plant alternative energy and nutrient acquisition strategies |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_alternative_energy_and_nutrient_acquisition_strategy_saprophyte |
carnivorous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_alternative_energy_and_nutrient_acquisition_strategy_carnivorous |
description | Plant that acquires some or most of its nutrients from animals or protozoa. |
has broader | Plant alternative energy and nutrient acquisition strategies |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_alternative_energy_and_nutrient_acquisition_strategy_carnivorous |
nutrient_mining
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_alternative_energy_and_nutrient_acquisition_strategy_nutrient_mining |
description | Plant that uses a specialised root structure, such as cluster roots, to mine nutrients inaccessible to other plant taxa. |
has broader | Plant alternative energy and nutrient acquisition strategies |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_alternative_energy_and_nutrient_acquisition_strategy_nutrient_mining |
Woodiness
herbaceous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/woodiness_herbaceous |
description | Plant with non-lignified stems. |
has broader | Woodiness |
is in scheme | https://w3id.org/APD/traits |
identifier | woodiness_herbaceous |
woody
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/woodiness_woody |
description | Plant whose stems are stiff and lignified, including both stems that produce secondary xylem and those that produce only lignified primary tissues but are notably stiff and robust. |
has broader | Woodiness |
is in scheme | https://w3id.org/APD/traits |
identifier | woodiness_woody |
Detailed woodiness categories
herbaceous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/woodiness_detailed_herbaceous |
description | Plant with non-lignified stems. |
has broader | Detailed woodiness categories |
is in scheme | https://w3id.org/APD/traits |
identifier | woodiness_detailed_herbaceous |
woody
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/woodiness_detailed_woody |
description | Plant whose stems produce secondary xylem (true wood). |
has broader | Detailed woodiness categories |
is in scheme | https://w3id.org/APD/traits |
identifier | woodiness_detailed_woody |
woody_base
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/woodiness_detailed_woody_base |
description | Plant where secondary xylem (true wood) is present only at the base of stems. (Synonyms, suffrutescent) |
has broader | Detailed woodiness categories |
is in scheme | https://w3id.org/APD/traits |
identifier | woodiness_detailed_woody_base |
woody_root
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/woodiness_detailed_woody_root |
description | Plant that has a woody rootstock but non-woody above-ground stems. |
has broader | Detailed woodiness categories |
is in scheme | https://w3id.org/APD/traits |
identifier | woodiness_detailed_woody_root |
semi_woody
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/woodiness_detailed_semi_woody |
description | Plant that forms stems considered only ‘partially woody’, generally having lower lignin and cellulose contents and possibly not forming secondary xylem. These are generally short-lived, fast-growing stems. (Synonyms, green-stem shrub, soft shrub, soft wood) |
has broader | Detailed woodiness categories |
is in scheme | https://w3id.org/APD/traits |
identifier | woodiness_detailed_semi_woody |
woody_like_stem
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/woodiness_detailed_woody_like_stem |
description | Taxa, including monocots and ferns, that produce thick, stiff, robust lignified stems but do not produce secondary xylem. |
has broader | Detailed woodiness categories |
is in scheme | https://w3id.org/APD/traits |
identifier | woodiness_detailed_woody_like_stem |
woody_like_inflorescence
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/woodiness_detailed_woody_like_inflorescence |
description | Taxa, including monocots, that produce thick, stiff, robust lignified inflorescence shoots but are otherwise non-woody. |
has broader | Detailed woodiness categories |
is in scheme | https://w3id.org/APD/traits |
identifier | woodiness_detailed_woody_like_inflorescence |
Physical defence structures
absent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_physical_defence_structures_absent |
description | Plant that lacks a physical defence structure. |
has broader | Physical defence structures |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_physical_defence_structures_absent |
prickle
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_physical_defence_structures_prickle |
description | A sharp-tipped outgrowth from the epidermis, bark or other plant organ that is explicitly not a spine (modified leaf) or thorn (modified stem). |
has broader | Physical defence structures |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_physical_defence_structures_prickle |
pungent_leaf_apex
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_physical_defence_structures_pungent_leaf_apex |
description | A sharp-tipped leaf. |
has broader | Physical defence structures |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_physical_defence_structures_pungent_leaf_apex |
spine
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_physical_defence_structures_spine |
description | A sharp-pointed structure, which is a modified leaf or leaf part, including petioles, midribs, secondary veins, leaflets, or stipules. |
has broader | Physical defence structures |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_physical_defence_structures_spine |
stinging_or_irritant_hairs
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_physical_defence_structures_stinging_or_irritant_hairs |
description | Trichomes that sting or irritate, by injecting a toxin. |
has broader | Physical defence structures |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_physical_defence_structures_stinging_or_irritant_hairs |
thorn
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_physical_defence_structures_thorn |
description | A sharp-pointed, stiff, woody modified stem. |
has broader | Physical defence structures |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_physical_defence_structures_thorn |
Plant climbing mechanisms
adventitious_roots
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_climbing_mechanism_adventitious_roots |
description | Roots arising from stem nodes which cling to a host plant. |
has broader | Plant climbing mechanisms |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_climbing_mechanism_adventitious_roots |
hooks
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_climbing_mechanism_hooks |
description | Curved stem outgrowths which allow climbers to cling to a host plant. |
has broader | Plant climbing mechanisms |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_climbing_mechanism_hooks |
spines
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_climbing_mechanism_spines |
description | Straight stem outgrowths (including true spines as well as thorns and prickles) which allow climbers to cling to a host plant. |
has broader | Plant climbing mechanisms |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_climbing_mechanism_spines |
tendrils
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_climbing_mechanism_tendrils |
description | Modified leaves, petioles, or specialised axillary shoots that coil tightly, forming a specialised structure for climbing. |
has broader | Plant climbing mechanisms |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_climbing_mechanism_tendrils |
scrambling
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_climbing_mechanism_scrambling |
description | Stem growth habit, where the plant stems are too weak to support themselves, and instead lean on and are supported by host vegetation. There are no specialised structures employed. |
has broader | Plant climbing mechanisms |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_climbing_mechanism_scrambling |
twining
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_climbing_mechanism_twining |
description | Stem growth habit, where the plant stems twist or coil around a host plant to provide support. |
has broader | Plant climbing mechanisms |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_climbing_mechanism_twining |
Plant succulence
succulent_stems
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_succulence_succulent_stems |
description | Stems are thick and fleshy. |
has broader | Plant succulence |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_succulence_succulent_stems |
succulent_leaves
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_succulence_succulent_leaves |
description | Leaves are thick and fleshy. |
has broader | Plant succulence |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_succulence_succulent_leaves |
succulent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_succulence_succulent |
description | A plant is designated as succulent but it is not specified which tissues are thick and fleshy. |
has broader | Plant succulence |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_succulence_succulent |
semi-succulent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_succulence_semi-succulent |
description | A plant has tissues that are somewhat thick and fleshy, including many chenopods. |
has broader | Plant succulence |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_succulence_semi-succulent |
not_succulent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_succulence_not_succulent |
description | Neither stems nor leaves are thick and fleshy. |
has broader | Plant succulence |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_succulence_not_succulent |
Stem growth habit
arborescent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_arborescent |
description | Tree-like growth habit. |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_arborescent |
erect
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_erect |
description | Stems that grow upright. |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_erect |
caespitose
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_caespitose |
description | Multiple short-shoots arise from the base of the plant forming a dense tuft, as in a bunch-grass. (Synonyms, cespitose, bunch-grass, tussock) |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_caespitose |
cushion-forming
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_cushion-forming |
description | Multiple erect, short stems arise from the soil and are so tightly packed that they form dense, even, rounded canopy with no gaps. (Synonyms, cushion) |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_cushion-forming |
mat-forming
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_mat-forming |
description | Multiple stems that are mostly horizontal and are densely packed but open enough that there are still a few gaps between them. |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_mat-forming |
tufted
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_tufted |
description | Plant has a dense clump of leaves, either at the base of the plant or clusters of leaves growing close together higher on the plant. This term can refer to grasses, shrubs, or trees. |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_tufted |
creeping
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_creeping |
description | Stem that creeps along the ground, rooting at nodes. (Synonyms, repent) |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_creeping |
decumbent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_decumbent |
description | Stems whose bases lie flat on the ground but whose tips grow upward. (Synonyms, ascending) |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_decumbent |
prostrate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_prostrate |
description | Stems lie flat on the ground but do not root at nodes. (Synonyms, procumbent, reclining, trailing) |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_prostrate |
rosette
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_rosette |
description | Plants whose leaves radiate from a central point at or near ground level. (Synonyms, acaulescent, rosulate) |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_rosette |
climbing
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_climbing |
description |
Stem that does not have a self-supporting structure and ascends by leaning on or attaching itself to surrounding vegetation or another substrate. Climbing mechanisms include tendrils, petioles, adventitious roots, scrambling, and twining and are distinguished between in the trait plant_climbing_mechanism .
|
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_climbing |
sprawling
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_sprawling |
description | Stem that sprawls across other plants or objects but lacks specialised climbing structures or mechanisms. (Synonyms, clambering, scandent) |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_sprawling |
rhizomatous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_rhizomatous |
description | Plants with short horizontal underground stems from which shoots emerge. |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_rhizomatous |
stoloniferous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_stoloniferous |
description | Plants with long horizontal branches either slightly belowground or aboveground, that root at their nodes or tips, producing new plants. (Synonyms, sarmentose) |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_stoloniferous |
spreading
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_spreading |
description | Plants with a notable horizontal extent, referring either to a broad tree canopy or a shrub or herb that spreads across the ground. |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_spreading |
floating
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_floating |
description | Plant where most of the leaves are floating on water. |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_floating |
submerged
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_submerged |
description | Plant where most of the leaves are submerged beneath the surface of a waterbody. |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_submerged |
dense
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_dense |
description | Plant with a high density of branches. |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_dense |
compact
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_compact |
description | Plant with closely packed branches. |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_compact |
bushy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_bushy |
description | Plant with much-branched branches. (Synonyms, shrubby) |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_bushy |
open
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_open |
description | Plant with an open architecture of branches. |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_open |
spindly
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/stem_growth_habit_spindly |
description | Plants with weak, skinny branches. |
has broader | Stem growth habit |
is in scheme | https://w3id.org/APD/traits |
identifier | stem_growth_habit_spindly |
Leaf phenology
deciduous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_phenology_deciduous |
description | Plant loses its entire leaf canopy for part of the year, in response to either drought or cold. |
has broader | Leaf phenology |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_phenology_deciduous |
evergreen
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_phenology_evergreen |
description | Plant retains a leaf canopy throughout the year. |
has broader | Leaf phenology |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_phenology_evergreen |
cold_deciduous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_phenology_cold_deciduous |
description | Plant loses its entire leaf canopy for part of the year, in response to cold. |
has broader | Leaf phenology |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_phenology_cold_deciduous |
drought_deciduous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_phenology_drought_deciduous |
description | Plant loses its entire leaf canopy for part of the year, in response to drought. |
has broader | Leaf phenology |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_phenology_drought_deciduous |
facultative_drought_deciduous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_phenology_facultative_drought_deciduous |
description | Plant sometimes loses its leaf canopy for part of the year, in response to drought. |
has broader | Leaf phenology |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_phenology_facultative_drought_deciduous |
semi_deciduous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_phenology_semi_deciduous |
description | Plant thins, but does not entirely lose, its leaf canopy in response to an environmental cue, usually drought. |
has broader | Leaf phenology |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_phenology_semi_deciduous |
brevi_deciduous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/leaf_phenology_brevi_deciduous |
description | Plant briefly loses its entire leaf canopy but flushes a new leaf canopy almost simultaneously to leaf loss. |
has broader | Leaf phenology |
is in scheme | https://w3id.org/APD/traits |
identifier | leaf_phenology_brevi_deciduous |
Competitive stratum
ground
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/competitive_stratum_ground |
description | Graminoids, herbs and ferns reaching maximum heights of c. 0.2-1 m. |
has broader | Competitive stratum |
is in scheme | https://w3id.org/APD/traits |
identifier | competitive_stratum_ground |
mid
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/competitive_stratum_mid |
description | Shrubs reaching maximum heights of c. 1-2 m. |
has broader | Competitive stratum |
is in scheme | https://w3id.org/APD/traits |
identifier | competitive_stratum_mid |
upper
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/competitive_stratum_upper |
description | Tall shrubs reaching maximum heights of c. 3-5 m. |
has broader | Competitive stratum |
is in scheme | https://w3id.org/APD/traits |
identifier | competitive_stratum_upper |
post_fire_ephemeral
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/competitive_stratum_post_fire_ephemeral |
description | Taxa that avoid competition with other strata by rapidly completing their life cycle after fire; a sub-category of ‘ground’. |
has broader | Competitive stratum |
is in scheme | https://w3id.org/APD/traits |
identifier | competitive_stratum_post_fire_ephemeral |
Plant nitrogen fixation capacity
non_nitrogen_fixer
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/nitrogen_fixing_non_nitrogen_fixer |
description | Plant does not host nitrogen-fixing microbes. |
has broader | Plant nitrogen fixation capacity |
is in scheme | https://w3id.org/APD/traits |
identifier | nitrogen_fixing_non_nitrogen_fixer |
nitrogen_fixer
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/nitrogen_fixing_nitrogen_fixer |
description | Plant hosts nitrogen-fixing microbes in root nodules. |
has broader | Plant nitrogen fixation capacity |
is in scheme | https://w3id.org/APD/traits |
identifier | nitrogen_fixing_nitrogen_fixer |
Plant root structures
arbuscular_mycorrhizal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_arbuscular_mycorrhizal |
description | Symbiosis in which the mycorrhizal fungi does penetrate the cortex cells of the plant roots and its hyphae form arbuscules and vesicles inside the plant root; endomycorrhizal, AM, VAM. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_arbuscular_mycorrhizal |
carnivorous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_carnivorous |
description | Plant has non-mycorrhizal carnivorous root. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_carnivorous |
cluster_roots
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_cluster_roots |
description | Non-proteoid taxa with cluster roots. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_cluster_roots |
coiling_vam
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_coiling_vam |
description | Associations that spread predominantly by intracellular hyphal coils within roots. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_coiling_vam |
dauciform_root
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_dauciform_root |
description | A type of cluster root found in the family Cyperaceae. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_dauciform_root |
ectomycorrhizal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_ectomycorrhizal |
description | Symbiosis in which the mycorrhizal fungi does not penetrate the cortex cells of the plant roots. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_ectomycorrhizal |
ericoid_mycorrhizal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_ericoid_mycorrhizal |
description | A form of arbuscular mycorrhizal relationship only found on plants in the order Ericales. The fungi’s hyphae penetrate the plant root but do not form arbuscules. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_ericoid_mycorrhizal |
fine_roots
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_fine_roots |
description | Particularly fine roots for nutrient uptake. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_fine_roots |
haustorium
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_haustorium |
description | A highly modified stem or root of a parasitic plant, such as mistletoe , or a specialized branch or tube originating from a hairlike filament (hypha) of a fungus. The haustorium penetrates the tissues of a host and absorbs nutrients and water. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_haustorium |
hemiparasitic_root
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_hemiparasitic_root |
description | Plant with a partially parasitic root. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_hemiparasitic_root |
long_root_hairs
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_long_root_hairs |
description | Plant with specialised long root hairs. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_long_root_hairs |
mycorrhizal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_mycorrhizal |
description | Plant mycorrhizal but type not specified. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_mycorrhizal |
non_mycorrhizal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_non_mycorrhizal |
description | Plants lacking a mycorrhizal symbiont. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_non_mycorrhizal |
orchid_mycorrhizal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_orchid_mycorrhizal |
description | A mycorrhizal relationship specific to orchid taxa, and for most orchids, essential for seedlings to establish. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_orchid_mycorrhizal |
parasitic_root
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_parasitic_root |
description | Plant with a parasitic root. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_parasitic_root |
proteoid_root
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_proteoid_root |
description | Also known as cluster roots, are plant roots that form clusters of closely spaced short lateral rootlets and aid in nutrient upake in nutrient-poor soils; common in members of the family Proteaceae but present in other families as well. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_proteoid_root |
root_hairs
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_root_hairs |
description | Plant with specialised root hairs. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_root_hairs |
sand-binding
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_sand-binding |
description | Persistent sheaths of sand that form around the roots of taxa in the families Restionaceae, Cyperaceae, Haemodoraceae, and Lomandraceae in western Australia. Assumed to function in nutrient uptake. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_sand-binding |
saprophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_saprophyte |
description | Plant that acquires nutrients from decaying biomass. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_saprophyte |
subepidermal_mycorrhizal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_subepidermal_mycorrhizal |
description | Mycorrhizae where hyphae grow in a cavity under epidermal cells. Only in the genus Thysanotus (family Laxmaniaceae). |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_subepidermal_mycorrhizal |
unknown
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/root_structure_unknown |
description | Root structures unknown. |
has broader | Plant root structures |
is in scheme | https://w3id.org/APD/traits |
identifier | root_structure_unknown |
Plant parasitism status
hemiparasitic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/parasitic_hemiparasitic |
description | Plant that is photosynthetic but augments its energy, mineral nutrition, and /or water supply through parasitism. This trait value does not distinguish between obligate hemiparasites, plants which require a host for at least part of their life cycle, and facultative hemiparasites, plants which can grow and reproduce without a host. |
has broader | Plant parasitism status |
is in scheme | https://w3id.org/APD/traits |
identifier | parasitic_hemiparasitic |
hemiparasitic_obligate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/parasitic_hemiparasitic_obligate |
description | Plant that is photosynthetic but requires a host for at least part of its life cycle. |
has broader | Plant parasitism status |
is in scheme | https://w3id.org/APD/traits |
identifier | parasitic_hemiparasitic_obligate |
hemiparasitic_facultative
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/parasitic_hemiparasitic_facultative |
description | Plant that is photosynthetic and can grow and reproduce without a host but augments its energy, mineral nutrition, and /or water supply through parasitism. |
has broader | Plant parasitism status |
is in scheme | https://w3id.org/APD/traits |
identifier | parasitic_hemiparasitic_facultative |
holoparasitic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/parasitic_holoparasitic |
description | Plant that obtains all (or nearly all) of its energy through parasitism. |
has broader | Plant parasitism status |
is in scheme | https://w3id.org/APD/traits |
identifier | parasitic_holoparasitic |
parasitic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/parasitic_parasitic |
description | Plant that obtains some energy, mineral nutrition and/or water through parasitism. This term is used if a dataset does not specify if a plant is a hemiparasite or a holoparasite. |
has broader | Plant parasitism status |
is in scheme | https://w3id.org/APD/traits |
identifier | parasitic_parasitic |
not_parasitic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/parasitic_not_parasitic |
description | In the context of this trait, a plant that does not acquire energy, mineral nutrition, and/or water via haustoria connected to another plant. It can include species that form a symbiosis, including a parasitic interaction, with a fungal partner. |
has broader | Plant parasitism status |
is in scheme | https://w3id.org/APD/traits |
identifier | parasitic_not_parasitic |
root_parasitic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/parasitic_root_parasitic |
description | Parasitic plant whose haustoria penetrate the root of a host plant. |
has broader | Plant parasitism status |
is in scheme | https://w3id.org/APD/traits |
identifier | parasitic_root_parasitic |
stem_parasitic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/parasitic_stem_parasitic |
description | Parasitic plant whose haustoria penetrate the stem of a host plant. |
has broader | Plant parasitism status |
is in scheme | https://w3id.org/APD/traits |
identifier | parasitic_stem_parasitic |
Plant sex type
androdioecious
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/sex_type_androdioecious |
description | Taxa in which hermaphroditic and staminate (male) plants coexist within a population. |
has broader | Plant sex type |
is in scheme | https://w3id.org/APD/traits |
identifier | sex_type_androdioecious |
andromonoecious
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/sex_type_andromonoecious |
description | Taxa with hermaphrodite flowers and staminate flowers (producing just male gametes) on the same plant but no pistillate (female) flowers. |
has broader | Plant sex type |
is in scheme | https://w3id.org/APD/traits |
identifier | sex_type_andromonoecious |
dioecious
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/sex_type_dioecious |
description | Taxa that produce male and female flowers on separate plants. |
has broader | Plant sex type |
is in scheme | https://w3id.org/APD/traits |
identifier | sex_type_dioecious |
gynodioecious
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/sex_type_gynodioecious |
description | Taxa in which hermaphroditic and pistillate (female) plants coexist within a population. |
has broader | Plant sex type |
is in scheme | https://w3id.org/APD/traits |
identifier | sex_type_gynodioecious |
gynomonoecious
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/sex_type_gynomonoecious |
description | Taxa with hermaphrodite flowers and pistillate flowers (producing just female gametes) on the same plant but no staminate (male) flowers. |
has broader | Plant sex type |
is in scheme | https://w3id.org/APD/traits |
identifier | sex_type_gynomonoecious |
hermaphrodite
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/sex_type_hermaphrodite |
description | Taxa with flowers that produce both male and female gametes; bisexual. |
has broader | Plant sex type |
is in scheme | https://w3id.org/APD/traits |
identifier | sex_type_hermaphrodite |
monoecious
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/sex_type_monoecious |
description | Taxa that have both male and female flowers on the same plant but an individual flower produces only male or female gametes. |
has broader | Plant sex type |
is in scheme | https://w3id.org/APD/traits |
identifier | sex_type_monoecious |
polygamous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/sex_type_polygamous |
description | Taxa with both unisexual and bisexual flowers on the same plant. |
has broader | Plant sex type |
is in scheme | https://w3id.org/APD/traits |
identifier | sex_type_polygamous |
polygamodioecious
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/sex_type_polygamodioecious |
description | Taxa where some flowers on a plant are hermaphrodite and other are pistillate (female) or staminate (male). |
has broader | Plant sex type |
is in scheme | https://w3id.org/APD/traits |
identifier | sex_type_polygamodioecious |
polygamonoecious
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/sex_type_polygamonoecious |
description | Taxa where some plants in a population have hermaphrodite and pistillate (female) flowers and others have hermaphrodite and staminate (male) flowers. |
has broader | Plant sex type |
is in scheme | https://w3id.org/APD/traits |
identifier | sex_type_polygamonoecious |
trioecious
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/sex_type_trioecious |
description | Taxa where plants in a population have either hermaphroditic (bisexual) flowers, pistillate (female) flowers, or staminate (male) flowers. |
has broader | Plant sex type |
is in scheme | https://w3id.org/APD/traits |
identifier | sex_type_trioecious |
unknown
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/sex_type_unknown |
description | Inadequate information to assign a sex type. |
has broader | Plant sex type |
is in scheme | https://w3id.org/APD/traits |
identifier | sex_type_unknown |
Pollination syndrome
abiotic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_abiotic |
description | Floral syndrome indicates pollination occurs through wind, water, or collision of free-floating particles. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_abiotic |
biotic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_biotic |
description | Floral syndrome suggests flowers are pollinated by a biotic agent. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_biotic |
animal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_animal |
description | Floral syndrome suggests flowers are animal-pollinated. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_animal |
ballistic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_ballistic |
description | Floral syndrome suggests pollen is launched away from the plant by explosion. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_ballistic |
bat
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_bat |
description | Floral syndrome suggests flowers are bat-pollinated. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_bat |
bee
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_bee |
description | Floral syndrome suggests flowers are bee-pollinated. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_bee |
beetle
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_beetle |
description | Floral syndrome suggests flowers are beetle-pollinated. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_beetle |
bird
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_bird |
description | Floral syndrome suggests flowers are bird-pollinated. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_bird |
butterfly
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_butterfly |
description | Floral syndrome suggests flowers are butterfly-pollinated. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_butterfly |
fly
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_fly |
description | Floral syndrome suggests flowers are fly-pollinated. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_fly |
insect
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_insect |
description | Floral syndrome suggests flowers are insect-pollinated, type of insect not specified. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_insect |
mammal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_mammal |
description | Floral syndrome suggests flowers are mammal-pollinated. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_mammal |
moth
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_moth |
description | Floral syndrome suggests flowers are moth-pollinated. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_moth |
thrip
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_thrip |
description | Floral syndrome suggests flowers are thrip-pollinated. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_thrip |
vertebrate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_vertebrate |
description | Floral syndrome suggests flowers are vertebrate-pollinated (bats, birds, mammals or lizards). |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_vertebrate |
wasp
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_wasp |
description | Floral syndrome suggests flowers are wasp-pollinated. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_wasp |
water
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_water |
description | Floral syndrome suggests flowers are water-pollinated. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_water |
wind
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_wind |
description | Floral syndrome suggests flowers are wind-pollinated. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_wind |
self
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_self |
description | Floral syndrome suggests flowers are primarily self-pollinating. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_self |
pollination_rare
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_syndrome_pollination_rare |
description | Plants mostly reproduce through vegetative spread and flowering is rare. |
has broader | Pollination syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_syndrome_pollination_rare |
Pollination system
abiotic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_abiotic |
description | Observations indicate pollination occurs through wind, water, or collision of free-floating particles. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_abiotic |
biotic_unspecialised
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_biotic_unspecialised |
description | Taxa are pollinated by a biotic agent, but do not have a specialist pollinator. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_biotic_unspecialised |
biotic_specialised
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_biotic_specialised |
description | Taxa depend upon a specialist pollinator for pollen transfer. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_biotic_specialised |
animal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_animal |
description | Flowers are observed to be animal-pollinated. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_animal |
ballistic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_ballistic |
description | Pollen is observed to be launched away from the plant by explosion. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_ballistic |
bat
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_bat |
description | Flowers are observed to be bat-pollinated. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_bat |
bee
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_bee |
description | Flowers are observed to be bee-pollinated. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_bee |
beetle
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_beetle |
description | Flowers are observed to be beetle-pollinated. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_beetle |
bird
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_bird |
description | Flowers are observed to be bird-pollinated. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_bird |
butterfly
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_butterfly |
description | Flowers are observed to be butterfly-pollinated. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_butterfly |
fly
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_fly |
description | Flowers are observed to be fly-pollinated. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_fly |
insect
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_insect |
description | Flowers are observed to be insect-pollinated, type of insect not specified. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_insect |
mammal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_mammal |
description | Flowers are observed to be mammal-pollinated. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_mammal |
moth
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_moth |
description | Flowers are observed to be moth-pollinated. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_moth |
thrip
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_thrip |
description | Flowers are observed to be thrip-pollinated. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_thrip |
vertebrate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_vertebrate |
description | Flowers are observed to be vertebrate-pollinated (bats, birds, mammals or lizards). |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_vertebrate |
wasp
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_wasp |
description | Flowers are observed to be wasp-pollinated. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_wasp |
water
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_water |
description | Flowers are observed to be water-pollinated. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_water |
wind
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_wind |
description | Flowers are observed to be wind-pollinated. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_wind |
self
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/pollination_system_self |
description | Flowers are self-pollinated. |
has broader | Pollination system |
is in scheme | https://w3id.org/APD/traits |
identifier | pollination_system_self |
Diaspore dispersal syndrome
anemochory
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_syndrome_anemochory |
description | Diaspore is dispersed by wind. (Synonyms, wind) |
has broader | Diaspore dispersal syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_syndrome_anemochory |
anthrochory
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_syndrome_anthrochory |
description | Diaspore is dispersed by humans, either intentionally or unintentionally. |
has broader | Diaspore dispersal syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_syndrome_anthrochory |
atelochory
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_syndrome_atelochory |
description | Diaspore dispersal is prevented. (Synonyms, antitelochory) |
has broader | Diaspore dispersal syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_syndrome_atelochory |
autochory
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_syndrome_autochory |
description | Diaspore is dispersed by methods originating from the parent plant or diaspore. |
has broader | Diaspore dispersal syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_syndrome_autochory |
ballistic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_syndrome_ballistic |
description | Seeds are launched away from the plant by explosion as soon as the seed capsule opens. |
has broader | Diaspore dispersal syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_syndrome_ballistic |
barochory
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_syndrome_barochory |
description | Diaspores are dispersed without assistance. (Synonyms, gravity, mobile, unassisted, passive) |
has broader | Diaspore dispersal syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_syndrome_barochory |
chamaechory
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_syndrome_chamaechory |
description | Diaspore is dispersed by being rolled along ground surface by wind. |
has broader | Diaspore dispersal syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_syndrome_chamaechory |
endozoochory
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_syndrome_endozoochory |
description | Diaspore is ingested by animals, either intentionally or accidentally, then transported before being deposited. (Synonyms, ingestion) |
has broader | Diaspore dispersal syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_syndrome_endozoochory |
epizoochory
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_syndrome_epizoochory |
description | Diaspore is dispersed by accidentally attaching itself to the outside of an animal vector. (Synonyms, ectozoochory, exozoochory) |
has broader | Diaspore dispersal syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_syndrome_epizoochory |
hydrochory
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_syndrome_hydrochory |
description | Diaspore is dispersed on the surface of water. (Synonyms, water) |
has broader | Diaspore dispersal syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_syndrome_hydrochory |
myrmecochory
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_syndrome_myrmecochory |
description | Diaspores have elaiosomes (specialised nutritious appendages) that make them attractive for capture, transport and use by ants or related insects. |
has broader | Diaspore dispersal syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_syndrome_myrmecochory |
undefined
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_syndrome_undefined |
description | Dispersal mechanism unknown. (Synonyms, unknown) |
has broader | Diaspore dispersal syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_syndrome_undefined |
zoochory
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersal_syndrome_zoochory |
description | Diaspore is dispersed by animals, by an undescribed mechanism. |
has broader | Diaspore dispersal syndrome |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersal_syndrome_zoochory |
Diaspore dispersal agents
indigenous_people
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_indigenous_people |
description | Indigenous people disperse the fruit through traditional practices. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_indigenous_people |
abiotic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_abiotic |
description | Fruits are dispersed by unspecified abiotic mechanisms. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_abiotic |
ants
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_ants |
description | Ants are an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_ants |
animals
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_animals |
description | Animals are an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_animals |
bats
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_bats |
description | Bats are an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_bats |
birds
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_birds |
description | Birds are an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_birds |
cassowaries
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_cassowaries |
description | Cassowaries, in contrast to smaller flying birds, are an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_cassowaries |
fish
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_fish |
description | Fish are an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_fish |
floods
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_floods |
description | Floods are an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_floods |
flying_vertebrates
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_flying_vertebrates |
description | Flying birds and bats are important fruit dispersal agents. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_flying_vertebrates |
flying_foxes
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_flying_foxes |
description | Flying foxes are an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_flying_foxes |
garden_refuse
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_garden_refuse |
description | Fruit are dispersed through garden refuse. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_garden_refuse |
insects
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_insects |
description | Insects are an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_insects |
invertebrates
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_invertebrates |
description | Invertebrates are an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_invertebrates |
mammals
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_mammals |
description | Mammals are an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_mammals |
mammals_domestic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_mammals_domestic |
description | Domesticated ammals are an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_mammals_domestic |
non-flying_vertebrates
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_non-flying_vertebrates |
description | Mammals and non-flying birds (i.e. cassowary, emu) are important fruit dispersal agents. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_non-flying_vertebrates |
passive
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_passive |
description | There is no special dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_passive |
rain
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_rain |
description | Rain is an important fruit dispersal agent; the diaspore is propelled by action of rain on plant structure or the wetting of the plant structure by rain or dew. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_rain |
rodents
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_rodents |
description | Rodents are an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_rodents |
vehicles
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_vehicles |
description | Vehicles are an important dispersal agent, such as through mud on tyres. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_vehicles |
vertebrates
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_vertebrates |
description | Vertebrates are an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_vertebrates |
wind
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_wind |
description | Wind is an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_wind |
water
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_water |
description | Water is an important fruit dispersal agent. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_water |
water_currents
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/dispersers_water_currents |
description | Water currents are an important fruit dispersal agent; the diaspore may be either floating or submerged in fresh/saltwater currents. |
has broader | Diaspore dispersal agents |
is in scheme | https://w3id.org/APD/traits |
identifier | dispersers_water_currents |
Environmental flowering cues
rain
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flowering_cues_rain |
description | Plants increase flowering in response to rain, but the time of year is not specified. |
has broader | Environmental flowering cues |
is in scheme | https://w3id.org/APD/traits |
identifier | flowering_cues_rain |
rain_obligate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flowering_cues_rain_obligate |
description | Plants only flower following rain events. |
has broader | Environmental flowering cues |
is in scheme | https://w3id.org/APD/traits |
identifier | flowering_cues_rain_obligate |
rain_all_year
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flowering_cues_rain_all_year |
description | Plants increase flowering in response to rain at any time of the year. |
has broader | Environmental flowering cues |
is in scheme | https://w3id.org/APD/traits |
identifier | flowering_cues_rain_all_year |
rain_summer
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flowering_cues_rain_summer |
description | Plants increase flowering in response to summer rains. |
has broader | Environmental flowering cues |
is in scheme | https://w3id.org/APD/traits |
identifier | flowering_cues_rain_summer |
rain_autumn
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flowering_cues_rain_autumn |
description | Plants increase flowering in response to autumn rains. |
has broader | Environmental flowering cues |
is in scheme | https://w3id.org/APD/traits |
identifier | flowering_cues_rain_autumn |
rain_winter
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flowering_cues_rain_winter |
description | Plants increase flowering in response to winter rains. |
has broader | Environmental flowering cues |
is in scheme | https://w3id.org/APD/traits |
identifier | flowering_cues_rain_winter |
rain_spring
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flowering_cues_rain_spring |
description | Plants increase flowering in response to spring rains. |
has broader | Environmental flowering cues |
is in scheme | https://w3id.org/APD/traits |
identifier | flowering_cues_rain_spring |
floods
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flowering_cues_floods |
description | Plants increase flowering in response to floods. |
has broader | Environmental flowering cues |
is in scheme | https://w3id.org/APD/traits |
identifier | flowering_cues_floods |
fire
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/flowering_cues_fire |
description | Plants increase flowering in response to fires. |
has broader | Environmental flowering cues |
is in scheme | https://w3id.org/APD/traits |
identifier | flowering_cues_fire |
Seedling establishment conditions
establish_post_fire
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedling_establishment_conditions_establish_post_fire |
description | Seedling establishment occurs following fire. |
has broader | Seedling establishment conditions |
is in scheme | https://w3id.org/APD/traits |
identifier | seedling_establishment_conditions_establish_post_fire |
establish_post_disturbance
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedling_establishment_conditions_establish_post_disturbance |
description | Seedling establishment occurs following disturbances that increase light levels at the ground surface, but the type of disturbance is not documented. |
has broader | Seedling establishment conditions |
is in scheme | https://w3id.org/APD/traits |
identifier | seedling_establishment_conditions_establish_post_disturbance |
establish_anytime
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedling_establishment_conditions_establish_anytime |
description | Seedlings can establish immediately following a disturbance and in later years as vegetation ages, right thru to mature and over-mature vegetation |
has broader | Seedling establishment conditions |
is in scheme | https://w3id.org/APD/traits |
identifier | seedling_establishment_conditions_establish_anytime |
establish_intermediate_to_mature_vegetation
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedling_establishment_conditions_establish_intermediate_to_mature_vegetation |
description | Seedlings require some environmental characteristics not found in vegetation straight after fires to establish, for they cannot establish within the first season or two after fire but can establish in older vegetation (including mature to over-mature vegetation). |
has broader | Seedling establishment conditions |
is in scheme | https://w3id.org/APD/traits |
identifier | seedling_establishment_conditions_establish_intermediate_to_mature_vegetation |
Seed storage location
seedbank
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedbank_location_seedbank |
description | A seedbank exists, but its locations is not specified. |
has broader | Seed storage location |
is in scheme | https://w3id.org/APD/traits |
identifier | seedbank_location_seedbank |
canopy_seedbank
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedbank_location_canopy_seedbank |
description | Seeds stored in the canopy, usually still within a woody cone. |
has broader | Seed storage location |
is in scheme | https://w3id.org/APD/traits |
identifier | seedbank_location_canopy_seedbank |
soil_seedbank
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedbank_location_soil_seedbank |
description | Seeds stored in the soil. |
has broader | Seed storage location |
is in scheme | https://w3id.org/APD/traits |
identifier | seedbank_location_soil_seedbank |
canopy_seedbank_absent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedbank_location_canopy_seedbank_absent |
description | Seed explicitly not stored in the canopy. |
has broader | Seed storage location |
is in scheme | https://w3id.org/APD/traits |
identifier | seedbank_location_canopy_seedbank_absent |
soil_seedbank_absent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedbank_location_soil_seedbank_absent |
description | Seed explicitly not stored in the soil. |
has broader | Seed storage location |
is in scheme | https://w3id.org/APD/traits |
identifier | seedbank_location_soil_seedbank_absent |
none
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedbank_location_none |
description | Seeds are not stored. |
has broader | Seed storage location |
is in scheme | https://w3id.org/APD/traits |
identifier | seedbank_location_none |
Serotiny
not_serotinous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/serotiny_not_serotinous |
description | Plant does not display serotiny. |
has broader | Serotiny |
is in scheme | https://w3id.org/APD/traits |
identifier | serotiny_not_serotinous |
serotinous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/serotiny_serotinous |
description | Plant serotinous, level not specified. |
has broader | Serotiny |
is in scheme | https://w3id.org/APD/traits |
identifier | serotiny_serotinous |
serotiny_low
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/serotiny_serotiny_low |
description | Plant displays a weak level of serotiny, indicating it releases most of its seeds gradually, with only a small proportion of the seeds retained as a canopy seedbank until an environmental cue triggers the release of the entire seedbank. |
has broader | Serotiny |
is in scheme | https://w3id.org/APD/traits |
identifier | serotiny_serotiny_low |
serotiny_moderate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/serotiny_serotiny_moderate |
description | Plant displays a moderate level of serotiny, indicating it releases some of its seeds gradually, with the remainder retained as a canopy seedbank until an environmental cue triggers the release of the entire seedbank. |
has broader | Serotiny |
is in scheme | https://w3id.org/APD/traits |
identifier | serotiny_serotiny_moderate |
serotiny_high
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/serotiny_serotiny_high |
description | Plant displays a strong level of serotiny, indicating all seeds are retained as a canopy seedbank until an environmental cue triggers their release. |
has broader | Serotiny |
is in scheme | https://w3id.org/APD/traits |
identifier | serotiny_serotiny_high |
Seedbank longevity class
transient
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedbank_longevity_class_transient |
description | Seed that survives in the seedbank until its first annual germination season, but not until its second annual germination season. Some transient seeds will germinate within weeks to months, while others may remain in the seedbank for slightly over a year, depending on how the annual recruitment season aligns with seed maturation. Transient seeds are non-dormant, remaining in the seedbank until environmental conditions are appropriate for germination. |
has broader | Seedbank longevity class |
is in scheme | https://w3id.org/APD/traits |
identifier | seedbank_longevity_class_transient |
persistent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedbank_longevity_class_persistent |
description | Seed that survives in the seedbank until at least its second germination season. |
has broader | Seedbank longevity class |
is in scheme | https://w3id.org/APD/traits |
identifier | seedbank_longevity_class_persistent |
short_persistent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedbank_longevity_class_short_persistent |
description | Seed that persists in the seedbank for approximately 1 to 5 years, although the time interval varies by study. |
has broader | Seedbank longevity class |
is in scheme | https://w3id.org/APD/traits |
identifier | seedbank_longevity_class_short_persistent |
long_persistent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedbank_longevity_class_long_persistent |
description | Seed that persists in the seedbank for more than 5 years, although the time interval varies by study. |
has broader | Seedbank longevity class |
is in scheme | https://w3id.org/APD/traits |
identifier | seedbank_longevity_class_long_persistent |
widely_dispersed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seedbank_longevity_class_widely_dispersed |
description | Seed longevity not important, as seeds are widely dispersed and always available for germination. |
has broader | Seedbank longevity class |
is in scheme | https://w3id.org/APD/traits |
identifier | seedbank_longevity_class_widely_dispersed |
Dormancy type
morphophysiological_dormancy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_dormancy_class_morphophysiological_dormancy |
description | Seeds exhibit morphophysiological dormancy, with both morphological and physiological dormancy mechanisms that must be overcome. |
has broader | Dormancy type |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_dormancy_class_morphophysiological_dormancy |
morphological_dormancy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_dormancy_class_morphological_dormancy |
description | Seeds exhibit morphological dormancy, generally because an underdeveloped embryo needs to grow. |
has broader | Dormancy type |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_dormancy_class_morphological_dormancy |
non_dormant
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_dormancy_class_non_dormant |
description | Seeds are non-dormant. |
has broader | Dormancy type |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_dormancy_class_non_dormant |
physical_dormancy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_dormancy_class_physical_dormancy |
description | Seeds exhibit physical dormancy, due to one or more water-impermeable layers in the seed coat. |
has broader | Dormancy type |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_dormancy_class_physical_dormancy |
physiological_dormancy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_dormancy_class_physiological_dormancy |
description | Seeds exhibit physiological dormancy, whereby chemical changes are required within the seed to break dormancy, including temperature stratification and after-ripening. |
has broader | Dormancy type |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_dormancy_class_physiological_dormancy |
Seed germination treatment
after_ripening
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_after_ripening |
description | Seed germinates more readily after a period of warm, dry storage. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_after_ripening |
chemical_treatment
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_chemical_treatment |
description | Seed germinates more readily after a chemical treatment. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_chemical_treatment |
cold
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_cold |
description | Seed germinates more readily after cold treatment. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_cold |
dark
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_dark |
description | Seed germinates more readily after being stored in the dark. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_dark |
heat
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_heat |
description | Seed germinates more readily after being heated. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_heat |
heat_lethal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_heat_lethal |
description | Seed is heat sensitive. (A fire response, more than a treatment to break dormancy.) |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_heat_lethal |
heat+smoke
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_heat+smoke |
description | Seed germinates more readily after a treatment that merges heat and smoke. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_heat+smoke |
imbibe_hot
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_imbibe_hot |
description | Seed germinates more readily after being soaked in hot water; water temperature usually between 70 deg C to just below boiling. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_imbibe_hot |
leaching
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_leaching |
description | Seed germinates more readily after leaching out certain chemicals. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_leaching |
light
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_light |
description | Seed germinates more readily after light exposure. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_light |
mycorrhizae
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_mycorrhizae |
description | Seed germinates more readily if infected by a mycorrhizal symbiont. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_mycorrhizae |
none
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_none |
description | No treatment required for seed to display high germination rates. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_none |
rain
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_rain |
description | Seed germinates more readily after rain. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_rain |
scarify
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_scarify |
description | Seed coat is removed, nicked, or otherwise punctured to increase germination. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_scarify |
smoke
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_smoke |
description | Seed germinates more readily after being subjected to a smoke treatment; includes smoked water. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_smoke |
stratification
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_stratification |
description |
Seed germinates more readily after being stored in moist conditions; not specified if the treatment was cold stratification or warm stratification .
|
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_stratification |
stratification_cold
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_stratification_cold |
description | Seed germinates more readily after a period of cold, wet storage. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_stratification_cold |
stratification_warm
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/seed_germination_treatment_stratification_warm |
description | Seed germinates more readily after a period of warm, wet storage. |
has broader | Seed germination treatment |
is in scheme | https://w3id.org/APD/traits |
identifier | seed_germination_treatment_stratification_warm |
Vegetative reproduction ability
not_vegetative
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/vegetative_reproduction_ability_not_vegetative |
description | Plant taxa that regenerate and spread only by seed. |
has broader | Vegetative reproduction ability |
is in scheme | https://w3id.org/APD/traits |
identifier | vegetative_reproduction_ability_not_vegetative |
vegetative
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/vegetative_reproduction_ability_vegetative |
description | Plant taxa that can regenerate and spread through the growth and division of vegetative material, not just from seed; examples include runners, rhizomes, and bulbs. |
has broader | Vegetative reproduction ability |
is in scheme | https://w3id.org/APD/traits |
identifier | vegetative_reproduction_ability_vegetative |
vegetative_obligate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/vegetative_reproduction_ability_vegetative_obligate |
description | Plant taxa that never (or very rarely) regenerate from seed, instead regenerating and spreading entirely through the growth and division of vegetative material. |
has broader | Vegetative reproduction ability |
is in scheme | https://w3id.org/APD/traits |
identifier | vegetative_reproduction_ability_vegetative_obligate |
Clonal spread mechanism
aboveground_clonal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/clonal_spread_mechanism_aboveground_clonal |
description | Vegetative buds or plant fragments that can disperse and produce new plants (including axillary buds, bulbils and turions). |
has broader | Clonal spread mechanism |
is in scheme | https://w3id.org/APD/traits |
identifier | clonal_spread_mechanism_aboveground_clonal |
adventitious_roots
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/clonal_spread_mechanism_adventitious_roots |
description | Adventitious roots can form at nodes on the main roots or aboveground from nodes on stems. |
has broader | Clonal spread mechanism |
is in scheme | https://w3id.org/APD/traits |
identifier | clonal_spread_mechanism_adventitious_roots |
bulb
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/clonal_spread_mechanism_bulb |
description | Below ground storage organ derived from stem (and sometimes leaf) tissue, that divides into new individuals. |
has broader | Clonal spread mechanism |
is in scheme | https://w3id.org/APD/traits |
identifier | clonal_spread_mechanism_bulb |
belowground_clonal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/clonal_spread_mechanism_belowground_clonal |
description | Plants use an unspecified underground organ for clonal spread. |
has broader | Clonal spread mechanism |
is in scheme | https://w3id.org/APD/traits |
identifier | clonal_spread_mechanism_belowground_clonal |
corm
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/clonal_spread_mechanism_corm |
description | Below ground organ derived from stem tissue that can function either for vegetative spread or to regenerate following a disturbance. |
has broader | Clonal spread mechanism |
is in scheme | https://w3id.org/APD/traits |
identifier | clonal_spread_mechanism_corm |
rhizome
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/clonal_spread_mechanism_rhizome |
description | Plant has an underground stem that has stem buds and forms adventitious roots at nodes; this stem may be woody or non-woody. Rhizomes are both a mechanism for vegetative spread and a strategy to survive fire. |
has broader | Clonal spread mechanism |
is in scheme | https://w3id.org/APD/traits |
identifier | clonal_spread_mechanism_rhizome |
root_buds
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/clonal_spread_mechanism_root_buds |
description | Root buds that produce vertical suckers. |
has broader | Clonal spread mechanism |
is in scheme | https://w3id.org/APD/traits |
identifier | clonal_spread_mechanism_root_buds |
root_tuber
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/clonal_spread_mechanism_root_tuber |
description | A swollen root that functions as a storage organ and has buds that allow clonal growth. |
has broader | Clonal spread mechanism |
is in scheme | https://w3id.org/APD/traits |
identifier | clonal_spread_mechanism_root_tuber |
stem_tuber
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/clonal_spread_mechanism_stem_tuber |
description | A swollen underground stem that functions as a storage organ and has buds that allow clonal growth. |
has broader | Clonal spread mechanism |
is in scheme | https://w3id.org/APD/traits |
identifier | clonal_spread_mechanism_stem_tuber |
stolon
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/clonal_spread_mechanism_stolon |
description | Plants having horizontal branches (stems) from the base of the plant that produce new plants from buds at its tip or nodes. |
has broader | Clonal spread mechanism |
is in scheme | https://w3id.org/APD/traits |
identifier | clonal_spread_mechanism_stolon |
viviparous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/clonal_spread_mechanism_viviparous |
description | Plant produces clonal offspring that grow while still attached to the parent plant. |
has broader | Clonal spread mechanism |
is in scheme | https://w3id.org/APD/traits |
identifier | clonal_spread_mechanism_viviparous |
non_clonal
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/clonal_spread_mechanism_non_clonal |
description | Plant does not display clonal growth. |
has broader | Clonal spread mechanism |
is in scheme | https://w3id.org/APD/traits |
identifier | clonal_spread_mechanism_non_clonal |
Storage organ
bulb
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_bulb |
description | Below ground storage organ derived from stem and usually leaf tissue. |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_bulb |
corm
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_corm |
description | Below ground storage organ that is a short, rounded, vertical, fleshy, underground stem. |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_corm |
caudex
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_caudex |
description | Swollen stem that usually functions in water storage, although the term can also apply to below ground structures or to swollen roots. |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_caudex |
fleshy_underground_organ
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_fleshy_underground_organ |
description | Plants that use fleshy, generally underground organs (swellings) to regenerate, but the type of organ is not specified; examples include corms, tubers, bulbs, and caudex. |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_fleshy_underground_organ |
lignotuber
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_lignotuber |
description | Swollen woody structures are located at the transition between the stem base and root crown of woody shrubs, mallees and small trees, and are formed from stem tissues. Buds are located over the entire structure. No colonisation ability. |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_lignotuber |
pseudobulb
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_pseudobulb |
description | An above ground storage organ present in many terrestrial and epiphytic orchids created throough the thickening of the stem between leaf nodes. |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_pseudobulb |
rhizome
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_rhizome |
description | A type of continually growing or creeping underground stem, but it is not specified if the rhizome is woody or non-woody. |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_rhizome |
rhizome_woody
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_rhizome_woody |
description | A type of continually growing or creeping woody underground stem. |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_rhizome_woody |
rhizome_fleshy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_rhizome_fleshy |
description | A type of continually growing or creeping fleshy, non-woody underground stem. |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_rhizome_fleshy |
rhizome_fibrous
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_rhizome_fibrous |
description | A type of continually growing or creeping fibrous, non-woody underground stem. |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_rhizome_fibrous |
root_tuber
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_root_tuber |
description | A swollen root the stores nutrients, carbohydrates and water. (Synonym, taproot tuber) |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_root_tuber |
stem_tuber
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_stem_tuber |
description | A swollen underground stem that stores nutrients, carbohydrates and water. |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_stem_tuber |
storage_organ
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_storage_organ |
description | Plant has a storage organ, but the type is unknown. |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_storage_organ |
tuber
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_tuber |
description | A swollen underground organ that stores nutrients, carbohydrates and water, where it is not specified if the tuber develops from root or stem tissue. |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_tuber |
no_storage_organ
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/storage_organ_no_storage_organ |
description | No storage organ present |
has broader | Storage organ |
is in scheme | https://w3id.org/APD/traits |
identifier | storage_organ_no_storage_organ |
Bud bank location
apical_buds
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_apical_buds |
description | Plants resprout from above-ground apical meristems. Also termed a caudex. Term refers to palm-like plants with aerial buds that resprout, including grass trees, palms, tree ferns, and pandanus. (Synonym, aerial apical sprouter) |
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_apical_buds |
basal_buds
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_basal_buds |
description |
Plants resprout from its base, with buds originating from stem tissue (e.g. lignotuber) and root tissue (root crown) not distinguished between. Most buds designated as being basal are likely to be resprouts from a lignotuber, but this trait value is used if the dataset reported basal buds rather than basal stem buds or lignotuber .
|
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_basal_buds |
basal_stem_buds
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_basal_stem_buds |
description |
Plants resprout from the base of the stem. Australian plants with basal stem buds usually have a lignotuber, documented in the trait storage_organ . (Synonym, rootstock, lignotuberous resprouter)
|
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_basal_stem_buds |
epicormic_buds
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_epicormic_buds |
description | Plants resprout from the stem or trunk. |
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_epicormic_buds |
fleshy_underground_organ
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_fleshy_underground_organ |
description | Plants resprouts from buds on a fleshy underground organ that is a taproot tuber, bulb, corm, stem tuber, root tuber, or belowground caudex. (Synonym, geophyte) |
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_fleshy_underground_organ |
root_crown
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_root_crown |
description | Plants resprout from the root crown, the root tissue at the root-stem transition. |
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_root_crown |
bud-bearing_root
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_bud-bearing_root |
description | Root buds produce vertical suckers (from root crown) or adventitious roots. (Synonyms, root-suckering resprouter, adventitious buds) |
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_bud-bearing_root |
rhizome
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_rhizome |
description | Plants resprout from buds on a rhizome, where it is not specified if the rhizome is woody or non-woody. |
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_rhizome |
rhizome_woody
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_rhizome_woody |
description | Plants resprout from buds on a woody rhizome. |
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_rhizome_woody |
rhizome_non_woody
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_rhizome_non_woody |
description | Plants resprout from buds on a fleshy rhizome, rhizophore, or fibrous rhizome. |
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_rhizome_non_woody |
stem_buds
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_stem_buds |
description | Plants resprout from stem buds; this trait value is separate to epicormic buds. (Synonyms, aerial axillary resprouter) |
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_stem_buds |
stem_tuber
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_stem_tuber |
description | Plants resprout from buds on a stem tuber. |
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_stem_tuber |
stolon
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_stolon |
description | Horizontal branches (stems) resprout from the base of the plant. |
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_stolon |
underground_buds
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_underground_buds |
description | Plants that resprout from underground organ, but the type of organ isn’t specified. |
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_underground_buds |
none
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/bud_bank_location_none |
description | Plants lack regenerative buds. |
has broader | Bud bank location |
is in scheme | https://w3id.org/APD/traits |
identifier | bud_bank_location_none |
Post-fire resprouting capacity
fire_killed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/resprouting_capacity_fire_killed |
description | Fewer than 30% of plants resprout following a fire with 100% leaf scorch. (Synonym, fire-sensitive) |
has broader | Post-fire resprouting capacity |
is in scheme | https://w3id.org/APD/traits |
identifier | resprouting_capacity_fire_killed |
resprouts
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/resprouting_capacity_resprouts |
description | More than 70% of plants resprout following a fire with 100% leaf scorch. |
has broader | Post-fire resprouting capacity |
is in scheme | https://w3id.org/APD/traits |
identifier | resprouting_capacity_resprouts |
partial_resprouting
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/resprouting_capacity_partial_resprouting |
description | Between 30-70% of plants resprout following a fire with 100% leaf scorch. |
has broader | Post-fire resprouting capacity |
is in scheme | https://w3id.org/APD/traits |
identifier | resprouting_capacity_partial_resprouting |
Post-fire resprouting capacity of juvenile plants
juvenile_fire_killed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/resprouting_capacity_juvenile_juvenile_fire_killed |
description | Few to no juvenile plants resprout following fire with 100% leaf scorch. |
has broader | Post-fire resprouting capacity of juvenile plants |
is in scheme | https://w3id.org/APD/traits |
identifier | resprouting_capacity_juvenile_juvenile_fire_killed |
juvenile_resprout
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/resprouting_capacity_juvenile_juvenile_resprout |
description | More than 50% of juvenile plants survive and resprout following fire with 100% leaf scorch. |
has broader | Post-fire resprouting capacity of juvenile plants |
is in scheme | https://w3id.org/APD/traits |
identifier | resprouting_capacity_juvenile_juvenile_resprout |
juvenile_moderate_fire_killed
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/resprouting_capacity_juvenile_juvenile_moderate_fire_killed |
description | 25-50% of juvenile plants resprout following fire with 100% leaf scorch. |
has broader | Post-fire resprouting capacity of juvenile plants |
is in scheme | https://w3id.org/APD/traits |
identifier | resprouting_capacity_juvenile_juvenile_moderate_fire_killed |
Plant vegetative response to disturbances other than fire
resprouts_non_fire_disturbance
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/resprouting_capacity_non_fire_disturbance_resprouts_non_fire_disturbance |
description | Plants that are known to be fire-killed, but have the ability to resprout following a disturbance other than fire that causes 100% leaf loss. |
has broader | Plant vegetative response to disturbances other than fire |
is in scheme | https://w3id.org/APD/traits |
identifier | resprouting_capacity_non_fire_disturbance_resprouts_non_fire_disturbance |
resprouts_after_cyclone
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/resprouting_capacity_non_fire_disturbance_resprouts_after_cyclone |
description | Plants are able to resprout following 100% leaf loss in a cyclone. |
has broader | Plant vegetative response to disturbances other than fire |
is in scheme | https://w3id.org/APD/traits |
identifier | resprouting_capacity_non_fire_disturbance_resprouts_after_cyclone |
resprouts_after_drought
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/resprouting_capacity_non_fire_disturbance_resprouts_after_drought |
description | Plants are able to resprout following 100% leaf loss during a drought. |
has broader | Plant vegetative response to disturbances other than fire |
is in scheme | https://w3id.org/APD/traits |
identifier | resprouting_capacity_non_fire_disturbance_resprouts_after_drought |
Fire exposure level
aquatic_taxon
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fire_exposure_level_aquatic_taxon |
description | Plants rarely or never experience fires because they are aquatic. |
has broader | Fire exposure level |
is in scheme | https://w3id.org/APD/traits |
identifier | fire_exposure_level_aquatic_taxon |
fire_avoidance_among_rocks
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fire_exposure_level_fire_avoidance_among_rocks |
description | Plants rarely experience fires because their habitat is restricted to rocky outcrops or rock pavement. |
has broader | Fire exposure level |
is in scheme | https://w3id.org/APD/traits |
identifier | fire_exposure_level_fire_avoidance_among_rocks |
fire_avoidance_near_water
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fire_exposure_level_fire_avoidance_near_water |
description | Plants rarely or never experience fires because their habitat is close to a body of water. |
has broader | Fire exposure level |
is in scheme | https://w3id.org/APD/traits |
identifier | fire_exposure_level_fire_avoidance_near_water |
fire_avoidance_in_swamp
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fire_exposure_level_fire_avoidance_in_swamp |
description | Plants rarely experience fires because their habitat is usually saturated, but populations can be catastrophically impacted during severe droughts when the swamps dry out. |
has broader | Fire exposure level |
is in scheme | https://w3id.org/APD/traits |
identifier | fire_exposure_level_fire_avoidance_in_swamp |
seasonal_fire_avoidance
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/fire_exposure_level_seasonal_fire_avoidance |
description | Plants avoid fire by only have above-ground parts during seasons when fire is rare or absent, but populations can be catastrophically impacted if fire occurs during an atypical season. |
has broader | Fire exposure level |
is in scheme | https://w3id.org/APD/traits |
identifier | fire_exposure_level_seasonal_fire_avoidance |
Post-fire recruitment
post_fire_recruitment
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/post_fire_recruitment_post_fire_recruitment |
description | Plants that germinate post-fire. |
has broader | Post-fire recruitment |
is in scheme | https://w3id.org/APD/traits |
identifier | post_fire_recruitment_post_fire_recruitment |
post_fire_recruitment_absent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/post_fire_recruitment_post_fire_recruitment_absent |
description | Plants that do not show increased seeding following fire. |
has broader | Post-fire recruitment |
is in scheme | https://w3id.org/APD/traits |
identifier | post_fire_recruitment_post_fire_recruitment_absent |
Post-fire flowering
fire_dependent_flowering
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/post_fire_flowering_fire_dependent_flowering |
description | Plants predominantly flower after a fire, usually within the first 1-4 growing seasons following the fire. |
has broader | Post-fire flowering |
is in scheme | https://w3id.org/APD/traits |
identifier | post_fire_flowering_fire_dependent_flowering |
fire_enhanced_flowering
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/post_fire_flowering_fire_enhanced_flowering |
description | Flowering is enhanced after a fire, with plants flowering more prolifically for the first 1-4 growing seasons following the fire. |
has broader | Post-fire flowering |
is in scheme | https://w3id.org/APD/traits |
identifier | post_fire_flowering_fire_enhanced_flowering |
fire_independent_flowering
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/post_fire_flowering_fire_independent_flowering |
description | Flowering is independent of fire, with the magnitude of flowers produced by plants unchanged following a fire. |
has broader | Post-fire flowering |
is in scheme | https://w3id.org/APD/traits |
identifier | post_fire_flowering_fire_independent_flowering |
fire_suppressed_flowering
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/post_fire_flowering_fire_suppressed_flowering |
description | Flowering is suppressed or absent after a fire, with plants producing fewer flowers for at least the first 1-4 growing seasons following the fire. |
has broader | Post-fire flowering |
is in scheme | https://w3id.org/APD/traits |
identifier | post_fire_flowering_fire_suppressed_flowering |
Plant resource requirements and tolerance
hydrohalophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_type_by_resource_use_hydrohalophyte |
description | Tidal swamp or ‘mangrove’ and coastal lagoon elements and temperate-zone salt-marsh taxa are classed together. |
has broader | Plant resource requirements and tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_type_by_resource_use_hydrohalophyte |
phreatophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_type_by_resource_use_phreatophyte |
description | Deep-rooted plants<U+2014>usually trees<U+2014>obtaining water from a deep underground source that may or may not be saline. |
has broader | Plant resource requirements and tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_type_by_resource_use_phreatophyte |
psammophile
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_type_by_resource_use_psammophile |
description | Sand-loving plants commonly found in littoral strand or inland sandfields. |
has broader | Plant resource requirements and tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_type_by_resource_use_psammophile |
weedy
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_type_by_resource_use_weedy |
description | This inexact term is meant to indicate a high degree of adaptability to sites, and proven tendency toward aggressive colonization of either dry or wet sites, or rarely, both. In general, weeds invade and colonize highly disturbed sites or areas. |
has broader | Plant resource requirements and tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_type_by_resource_use_weedy |
xerohalophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_type_by_resource_use_xerohalophyte |
description | Plants adapted to inland salt desert and saline habitats. |
has broader | Plant resource requirements and tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_type_by_resource_use_xerohalophyte |
xerophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_type_by_resource_use_xerophyte |
description | Drought-tolerant and drought-adapted plants. |
has broader | Plant resource requirements and tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_type_by_resource_use_xerophyte |
Plant flood regime response
terrestrial_dry
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_flood_regime_classification_terrestrial_dry |
description | Species which germinate, grow and reproduce where there is no surface water and the water table is below the soil surface. (Dry species; Tdr) |
has broader | Plant flood regime response |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_flood_regime_classification_terrestrial_dry |
terrestrial_damp
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_flood_regime_classification_terrestrial_damp |
description | Species which germinate, grow and reproduce on saturated soil. (Damp species; Tda) |
has broader | Plant flood regime response |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_flood_regime_classification_terrestrial_damp |
amphibious_fluctuation_tolerators_emergent
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_flood_regime_classification_amphibious_fluctuation_tolerators_emergent |
description | Species which germinate in damp or flooded conditions, which tolerate variation in water level, and which grow with their basal portions under water and reproduce out of water. (Emergent species; ATe) |
has broader | Plant flood regime response |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_flood_regime_classification_amphibious_fluctuation_tolerators_emergent |
amphibious_fluctuation_tolerators_low
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_flood_regime_classification_amphibious_fluctuation_tolerators_low |
description | Species which germinate in damp or flooded conditions, which tolerate variation in water level, which are low-growing and tolerate complete submersion when water-levels rise. (Low-growing species; ATl) |
has broader | Plant flood regime response |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_flood_regime_classification_amphibious_fluctuation_tolerators_low |
amphibious_fluctuation_responders_plastic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_flood_regime_classification_amphibious_fluctuation_responders_plastic |
description | Species which germinate in flooded conditions, grow in both flooded and damp conditions, reproduce above the surface of the water, and which have morphological plasticity (e.g. heterophylly) in response to water-level variation. (Morphologically plastic species; ARp) |
has broader | Plant flood regime response |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_flood_regime_classification_amphibious_fluctuation_responders_plastic |
amphibious_fluctuation_responders_floating
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_flood_regime_classification_amphibious_fluctuation_responders_floating |
description | Species which germinate in flooded conditions, grow in both flooded and damp conditions, reproduce above the surface of the water, and which have floating leaves when inundated. (Species with floating leaves; ARf) |
has broader | Plant flood regime response |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_flood_regime_classification_amphibious_fluctuation_responders_floating |
amphibious
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_flood_regime_classification_amphibious |
description | Species which germinate in damp or flooded conditions and can grow in or our of water. |
has broader | Plant flood regime response |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_flood_regime_classification_amphibious |
submerged
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_flood_regime_classification_submerged |
description | Species which germinate, grow and reproduce underwater. (S |
has broader | Plant flood regime response |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_flood_regime_classification_submerged |
Plant water-logging tolerance
not_applicable
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_water_logged_soils_not_applicable |
description | Taxa is not typically confronted with waterlogging and its response is unknown. |
has broader | Plant water-logging tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_water_logged_soils_not_applicable |
less_than_1_month
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_water_logged_soils_less_than_1_month |
description | Taxa able to tolerate less than 1 month of waterlogging. |
has broader | Plant water-logging tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_water_logged_soils_less_than_1_month |
1-6_months
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_water_logged_soils_1-6_months |
description | Taxa able to tolerate 1-6 months of waterlogging. |
has broader | Plant water-logging tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_water_logged_soils_1-6_months |
greater_than_6_months
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_water_logged_soils_greater_than_6_months |
description | Taxa able to tolerate more than 6 months of waterlogging. |
has broader | Plant water-logging tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_water_logged_soils_greater_than_6_months |
aquatic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_water_logged_soils_aquatic |
description | Taxa truly aquatic and able to be permanently inundated. |
has broader | Plant water-logging tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_water_logged_soils_aquatic |
Plant inundation tolerance
not_applicable
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_inundation_not_applicable |
description | Taxa is not typically confronted with being inundated and its response is unknown. |
has broader | Plant inundation tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_inundation_not_applicable |
less_than_1_month
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_inundation_less_than_1_month |
description | Taxa able to tolerate being inundated for less than 1 month. |
has broader | Plant inundation tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_inundation_less_than_1_month |
1-6_months
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_inundation_1-6_months |
description | Taxa able to tolerate being inundated for 1-6 months. |
has broader | Plant inundation tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_inundation_1-6_months |
greater_than_6_months
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_inundation_greater_than_6_months |
description | Taxa able to tolerate being inundated for more than 6 months. |
has broader | Plant inundation tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_inundation_greater_than_6_months |
aquatic
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_inundation_aquatic |
description | Taxa truly aquatic and able to be permanently inundated. |
has broader | Plant inundation tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_inundation_aquatic |
Plant snow tolerance
not_applicable
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_snow_not_applicable |
description | Taxa is virtually never confronted with snow in nature and the response is unknown. |
has broader | Plant snow tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_snow_not_applicable |
intolerant
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_snow_intolerant |
description | Taxa is frost tender and known to be killed by any snow. |
has broader | Plant snow tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_snow_intolerant |
days
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_snow_days |
description | Taxa can tolerate being covered by snow for days (typically less than 1 week). |
has broader | Plant snow tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_snow_days |
weeks
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_snow_weeks |
description | Taxa can tolerate being covered by snow for weeks (typically less than 1 month). |
has broader | Plant snow tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_snow_weeks |
months
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_snow_months |
description | Taxa can tolerate being covered by snow for months. |
has broader | Plant snow tolerance |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_snow_months |
Plant salt tolerance strategy
glycophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_salt_glycophyte |
description | Plants that cannot survive even one tenth the salt concentration found in seawater. |
has broader | Plant salt tolerance strategy |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_salt_glycophyte |
halophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_salt_halophyte |
description | Plants that complete their life cycle in a salty environment; many survive in seawater or even higher concentrations of salt. |
has broader | Plant salt tolerance strategy |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_salt_halophyte |
halophyte_moderate
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_salt_halophyte_moderate |
description | Plant that is moderately tolerant of soil salinity/sodicity. |
has broader | Plant salt tolerance strategy |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_salt_halophyte_moderate |
hydrohalophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_salt_hydrohalophyte |
description | Tidal swamp or ‘mangrove’ and coastal lagoon elements and temperate-zone salt-marsh taxa are classed together. |
has broader | Plant salt tolerance strategy |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_salt_hydrohalophyte |
salt_spray_tolerant
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_salt_salt_spray_tolerant |
description | Plant that is tolerant of salt spray (typically inhabiting near-coastal environments). |
has broader | Plant salt tolerance strategy |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_salt_salt_spray_tolerant |
salinity_tolerance_undefined
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_salt_salinity_tolerance_undefined |
description | Plant’s ability to tolerate salt is unknown. |
has broader | Plant salt tolerance strategy |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_salt_salinity_tolerance_undefined |
xerohalophyte
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_salt_xerohalophyte |
description | Plants adapted to inland salt desert and saline habitats. |
has broader | Plant salt tolerance strategy |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_salt_xerohalophyte |
Plant calcium sensitivity
calcicole
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_calcicole_calcicole |
description | Plants are tolerant of basic soils, such as calcareous sands and limestone derived soils. |
has broader | Plant calcium sensitivity |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_calcicole_calcicole |
calcifuge
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_calcicole_calcifuge |
description | Plants are intolerant of basic soils. (Synonyms, acidophilous) |
has broader | Plant calcium sensitivity |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_calcicole_calcifuge |
Plant fire tolerance strategy
fire_retardant
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_fire_fire_retardant |
description | Plants protected from fire by fire retardant in their bark, stems, or other tissues. |
has broader | Plant fire tolerance strategy |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_fire_fire_retardant |
fire_retardant_bark
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_fire_fire_retardant_bark |
description | Plants protected from fire by fire retardant in their bark. |
has broader | Plant fire tolerance strategy |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_fire_fire_retardant_bark |
thick_bark
Property | Value |
---|---|
URI | https://w3id.org/APD/traits/plant_tolerance_fire_thick_bark |
description | Plants protected from fire by thick bark. |
has broader | Plant fire tolerance strategy |
is in scheme | https://w3id.org/APD/traits |
identifier | plant_tolerance_fire_thick_bark |
5. Glossary
This section of the ontology includes terminology used within trait concept descriptions that are not defined by other resources.
accessory cost
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40004 |
description | Biomass investment [OMIT:0008566] in reproductive tissues [CARO:0000043] other than the seeds [PO:0009010]. These tissues include prepollination (flower, nectar, and pollen) and postpollination (packaging, protective and dispersal [EnvThes:21038] tissues) as well as aborted floral parts. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40004 |
ambient photosynthetic rate
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40006 |
description | Photosynthetic rate [TO:0001015] in a plant whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are exposed to ambient [NCIT:C62306] photosynthetically active radiation [ENVO:01001864] levels and ambient atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033] while the measurement is made. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40006 |
bark water content
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40014 |
description | A bark mass trait [APD:trait_group_0012006] which is the mass [PATO:0000125] of water [CHEBI:15377] in a section of bark [PO:0004518]. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40014 |
coarse root
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40026 |
description | A root greater than 2 mm in diameter. The alternative to fine roots [EnvThes:20581]. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40026 |
ignition
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40040 |
description | The act of causing something to start burning [Merriam-Webster Dictionary]. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40040 |
fresh mass
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40044 |
description | The mass [PATO:0000125] of tissue [CARO_0000043] before it is dried; the mass of the tissue when it is fresh [EnvThes:21976]. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40044 |
leaf water content
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40050 |
description | A leaf mass trait [TO:0000505] which is the total mass [PATO:0000125] of water [CHEBI:15377] in a leaf [PO:0025034]. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40050 |
maximum photosynthetic rate, Amax
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40058 |
description | Photosynthetic rate [TO:0001015] in a plant whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are saturated [NCIT_C61427] by photosynthetically active radiation [ENVO:01001864] and which is exposed to saturating atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033] while the measurement is made. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40058 |
merism
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40060 |
description | The repetition of similar parts, units, or segments within the structure of an organism. [www.lexico.com] |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40060 |
non-structural carbohydrates
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40062 |
description | Carbohydrates [CHEBI:16646], including starches [CHEBI:28017] and sugars [APD_glossary:glossary_40106], that are relatively easy to metabolise [NCIT:C19536] by both plants and animals. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40062 |
pendulous
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40066 |
description | Hanging downward loosely or freely. [Simpson] |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40066 |
per unit mass
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40068 |
description | A ratio [PATO:0001470], where the denominator [NCIT:C80489] is a measure of mass [PATO:0000125]. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40068 |
placentation
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40074 |
description | Referring to the position [PATO:0000140] of the ovules [PO:0020003] within the ovary [PO:0009072]. [Plant Systematics] |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40074 |
whole plant leaf dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40076 |
description | A leaf mass trait [TO:0000505] which is the sum of the leaf dry mass [TO:0000505] of all leaves [PO:0025034] of a whole plant [PO:0000003] [from TOP]. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40076 |
whole plant stem dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40080 |
description | A stem mass trait [TO:0000952] which is the sum of the stem dry mass [TO:0003001] of all leaves [PO:0009047] of a whole plant [PO:0000003] [dervied from TOP]. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40080 |
whole plant dry mass
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40081 |
description | The dry mass [PATO:0000125] of a whole plant [PO:0000003]. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40081 |
pollinator
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40086 |
description | A pollinator is an animal that intentionally or unintentionally moves pollen from the male anther of a flower to the female stigma of a flower. [Wikipedia] |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40086 |
punch
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40088 |
description | The force [PATO:0001035] required to punch a hole. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40088 |
saturated photosynthetic rate, Asat
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40092 |
description | Photosynthetic rate [TO:0001015] in a plant whose photosystem [GO:0009521] I and II reaction centers [GO:0009538; GO:0009539] are saturated [NCIT_C61427] by photosynthetically active radiation [ENVO:01001864] and which is exposed to ambient [NCIT:C62306] atmospheric carbon dioxide [ENVO:01000451] concentrations [PATO:0000033] while the measurement is made. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40092 |
smoulder combustion
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40094 |
description | The slow, flameless form of combustion, sustained by the heat evolved when oxygen directly attacks the surface of a condensed-phase fuel. [Wikipedia] |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40094 |
sugar
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40106 |
description | An informal grouping of carbohydrates [CHEBI:16646] that includes monosaccharides [CHEBI:35381] and disaccharides [CHEBI:36233]. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40106 |
vessel lumen
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40112 |
description | The lumen [PO:0025117] of the xylem vessel [PO:0025417]. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40112 |
vestiture
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40114 |
description | Trichome cover [TO:0006066], a combination of trichome type [TO:0000911], length [PATO:0000122], strength [PATO:0001230], shape [PATO:0000052], density [PATO:0001019], and color [PATO:0000014] [Simpson glossary] |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40114 |
pressure-volume curve
Property | Value |
---|---|
URI | https://w3id.org/APD/glossary/glossary_40124 |
description | A plot of the relationship between tissue water content and tissue water potential, which is used in plant water-relations studies to understand tissue/cell elasticity, cell turgor, and cell osmotic potential. |
top concept of | https://w3id.org/APD/glossary |
is in scheme | https://w3id.org/APD/glossary |
identifier | glossary_40124 |
6. Acknowledgements
We are grateful to S Cox, J Smillie, K Levett, M Barlow, and C Brady for useful conversations. The AusTraits project received investment (https://doi.org/10.47486/TD044, https://doi.org/10.47486/DP720) from the Australian Research Data Commons (ARDC). The ARDC is funded by the National Collaborative Research Infrastructure Strategy (NCRIS).