For Australian states and territories, use geographic distribution data from the APC to calculate state-level diversity for native, introduced, and more complicated species origins
Usage
state_diversity_counts(state, resources = load_taxonomic_resources())Arguments
- state
A character string indicating the Australian state or territory to calculate the diversity for. Possible values are "NSW", "NT", "Qld", "WA", "ChI", "SA", "Vic", "Tas", "ACT", "NI", "LHI", "MI", "HI", "MDI", "CoI", "CSI", and "AR".
- resources
the taxonomic resources required to make the summary statistics. loading this can be slow, so call load_taxonomic_resources separately to greatly speed this function up and pass the resources in.
Value
A tibble of diversity counts for the specified state or territory, including native, introduced, and more complicated species origins. The tibble has three columns: "origin" indicating the origin of the species, "state" indicating the Australian state or territory, and "num_species" indicating the number of species for that origin and state.
See also
Other diversity methods:
create_species_state_origin_matrix(),
native_anywhere_in_australia()
Examples
state_diversity_counts(state = "NSW")
#>
#> Loading resources into memory...
#>
===========================
=====================================================
================================================================================
#> ...done
#> # A tibble: 7 × 3
#> origin state num_species
#> <chr> <chr> <table[1d]>
#> 1 doubtfully naturalised NSW 94
#> 2 formerly naturalised NSW 8
#> 3 native NSW 5966
#> 4 native and doubtfully naturalised NSW 2
#> 5 native and naturalised NSW 34
#> 6 naturalised NSW 1583
#> 7 presumed extinct NSW 9