Here you will find links to various pieces of software and analysis code, supporting projects on trait-based ecology & evolution. Common features across the items listed are that they:
1) Involve either Daniel Falster, Rich FitzJohn, Will Cornwell, or Matt Pennell, and
2) Are either tools that you can potentially use in your own work, or analyses that are reproducible.
This is not meant to be a comprehensive overview of ALL relevant tools, or all of our work, just some stuff we made and thought you might find useful. Wherever possible we've provided links to github or other code packages.
Short title |
Authors |
Year |
Journal |
Reproducible |
Complexity of analysis |
Plant: package for modelling forest trait ecology and evolution |
Falster, FitzJohn, et al. |
2016 |
Methods in Ecology & Evolution |
All analyses & ms |
Medium |
Maximizing the overlap of phylogenetic and comparative data |
Pennell, FitzJohn, Cornwell |
2016 |
Methods in Ecology & Evolution |
All analyses & ms |
Low |
Leaf mass per area drives differences biomass distribution |
Duursma & Falster |
2016 |
New Phytologist |
All analyses & ms |
Low |
On the link between functional traits and growth rate |
Gibert, Falster, et al. |
2016 |
Journal of Ecology |
All analyses & ms |
Low |
Warming strengthens positive feedback between shrubs and fire |
Camac, et al. |
2016 |
BioRxiv |
All analyses & ms |
Medium |
Effects of litter traits on surface fires |
Cornwell, et al. |
2015 |
New Phytologist |
Figures |
Low |
Competitive coexistence & evolved neutrality |
Falster et al. |
2015 |
BioRxiv |
Figures |
High |
Adequacy of trait evolution models |
Pennell, FitzJohn,Cornwell et al |
2015 |
American Naturalist |
All analyses & ms |
Medium |
Quantifying reproductive allocation schedules in plants |
Wenk & Falster |
2015 |
Ecology & Evolution |
All analyses & ms |
Low |
Optimal sapwood cross section in relation to leaf area |
Westoby, Cornwell, Falster |
2012 |
Journal of Theoretical Biology |
All analyses & figures |
Low |
General model for the scaling of offspring and adult size |
Falster et al |
2008 |
The American Naturalist |
All analyses & figures |
Low |